Busch Lab

ZMP

CHD6

Ensembl ID:
ENSDARG00000017244
Description:
chromodomain helicase DNA binding protein 6 [Source:HGNC Symbol;Acc:19057]
Human Orthologue:
CHD6
Human Description:
chromodomain helicase DNA binding protein 6 [Source:HGNC Symbol;Acc:19057]
Mouse Orthologue:
Chd6
Mouse Description:
chromodomain helicase DNA binding protein 6 Gene [Source:MGI Symbol;Acc:MGI:1918639]

Alleles

There are 10 alleles of this gene:

Allele Name Consequence Status Availability
sa10755 Nonsense Available for shipment Available now
sa17547 Essential Splice Site Available for shipment Available now
sa20819 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa10755
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000028607 Nonsense 244 1642 7 33
Genomic Location (Zv9):
Chromosome 6 (position 51581941)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 51631123
GRCz11 6 51631122
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATTGTTGTGCAGAAGAGGCGATCAGGGCGTCAAGTGAAGCGGCGGAAGTA[T/A]AACGAAGATCTTGATTTCAAGGTKRYGGATGATGACGGGGAGACCATCGC
Long Flanking Sequence:
TCCACATCAAGAGAAGTCAGCTGAGGTCGCTCGGGCATCTGTTTCGGATGCATCCTCGATGCCTACCTAGGGAGATGTTTGGGAGGAACACTCGGGGAAGACCCAGGACATGCTGGAGAGACTATGTCTCTCGGCTGGCCTGGGAATGCCTCGGGATCCCCCCAGAGGAAGAGGGGAGAGGGATATCTGAGGTTATCTTGCTGCCTTTGCGACCTGGCCCTGGAAAAACTGATGAAAATGAATGAATGAATAGTGTATATTTTCAAGTTCAGATTTCTGATTATTGTATATATTTTCGATATCATCTTAACTTGCCATCATTTAATAAATTAGAGAAAAAAATTCATTAAGTTTAATCAGAAGTGAAAGTACACACTTTCTGTCTTAGGGAGTGTATTTTTTAAATGTTTATGCTAACAACTTTGAAAAATGACTTTTTCTCATTTCTTTATTGTTGTGCAGAAGAGGCGATCAGGGCGTCAAGTGAAGCGGCGGAAGTA[T/A]AACGAAGATCTTGATTTCAAGGTTGTGGATGATGACGGGGAGACCATCGCTGTGTTGGGCTCGGGCCGAATCGCCGCCATGTCTTCCTCCACCCTCGCTTGGCAGGCTGAGGTAACCGTGGCAACATCTGTTTTTATGCCACACCACAGACCTGCCCTACTTCTGTAGGGGCGGAGATAACACTCTGGAATGATCCCCATCTGCTTTTTTTTTCTCCCCAGGAACCCCCTGAAGACGAGGCTAATATCATTGAGAAAATCCTCTCAGTGCGAACGGTCAACAAAGAGGTAAATGGTTCAGATTACACATATAAAAACTGCAGTAAAAGAGCTCATGAACTCTGAGGTCCATTGTCAAGGTTTTTACATTAAAAAAAGTAATGGGAGCAATTCCAGCATTATGGATGTGACATTTGAAGTAAAAACATAAACCTAAATTCACAGAGAAAGTATATTTAACATAATATTGAAACATCTGTTTATTTTTTCAAAACTACCAAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17547
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000028607 Essential Splice Site 477 1642 13 33
Genomic Location (Zv9):
Chromosome 6 (position 51575784)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 51624966
GRCz11 6 51624965
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAATACCAGYTAGAGGGAAYGAACTGGCTGCTTTTCAACTGGTACAACAG[G/T]TAAAAAAGAAGATATTAGGGYTCACATTAATGTTTGAGYCTATTTAAAGG
Long Flanking Sequence:
TATAATAAATACTTGTGGCGCCAGTCTTTTAATGTTGGCTTTGTTTGCATTTTAACAGGAAGTTACACACTACCTGGTGAAATGGTGCTCTTTGTCATATGAAGAGAGCACTTGGGAGCTTCAGGAAGATGTCGACCCTGTAAAAATCAAAGAGTTCGAAGAGCTCAAGAAAGTTCCTGAAATGAAGCATGTGGTAAGTCCTTGACTTCAAATAGAGCTGGTGTTTCCTCGTAACACGATTTATTGGTCAATTATACAGTGTGCATGTTTGCATTATGATCACGTGGTTCAACGTGGTTTAAGAACATGTTTATTTTTCTGTACAGCATGCATTTTGAAGGAAATGACTGTTGTCTTGTATTTGTTTTTATAATACAGGAAAGGCCTTTGCCAGAACAGTGGCAGAAACTGGAAAAATCCAGAGACTACAGGAATGGGAATCAGCTCCGAGAATACCAGCTAGAGGGAATGAACTGGCTGCTTTTCAACTGGTACAACAG[G/T]TAAAAAAGAAGATATTAGGGTTCACATTAATGTTTGAGTCTATTTAAAGGTATATTGTCACTAATTTAGGAATAATCTAAAGCTAATAAAAAAAAAGATTTACAAAATAAAACACCAATAAATTAGCATTTTAATCTGTTTTTTTTTTATTATTCATCTCAGTTGTTTATTTAGCTGCATTTAGGTTTATCAACGCTTATTAAAAAAAGCATTCAATCATTCATTTGTTCATTCATTCATTCATTCATTTTCCTTTGGCTAAGTCCCTTTATTCATCAGGGATCACCACATTGGAATAAATTACCAACTTTTGTTGGCTCCAGCATATGTTTTACACAGCTTATGCCCTTTCAGCTGCAACCCAGTACTGGGAAACATACACACTCATCCACACACATACACTACAGCCAATTTAGTTTATTCAATTCGCATGTCTTTGGACTGTGGGGAAAACAGAGCACCTGGAGGAAACCCATGCCAGCATGGGGAGAACATGCAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20819
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000028607 Nonsense 1625 1642 33 33
Genomic Location (Zv9):
Chromosome 6 (position 51546572)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 51595754
GRCz11 6 51595753
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AACTATCCTTCCTGGAGGCCCACCGGAACTATGTTCATAAAGAAAACCAC[A/T]GATATCCAGTCCCAGGATTGCCCCACCATCATTGCTGCTTATATGATGCC
Long Flanking Sequence:
CTTGCTCGATTGGAGAGAAAAACAGATGAAAGCTTAGAGAGATATTTCCACAGCTTTGTTTCAATGTGTCGCACTGCATGTAGACTGCCACCAAGAAAAGATGAAGGTAAGATGGATCTTATTTCATAGTTAGTAGAATTAATAGAAGCTCATTTTCTTGTAACATATACACAACTTTTTTATCTCAAATAGGCAATGTTGATCCTTCATTATTTGTGGACCCTATTACAGAAGAGCGAGCTGCCCGAACATTATATCGTATTGAGCTTTTGAGAAAGGTCCGCGAGCAAGTATTGCGCCACCCTCTTCTGGGAGCACGACTGCAGCTTTGTCGCCCTAGTCTGTACTTGCCGGTCTGGTGGGAATGTGGTAAACATGACCGTGATCTTCTCATTGGTGTTGCTAAGCATGGCTTGAGTCGAACTGACTTCTACATCCTCAATGACCCCCAACTATCCTTCCTGGAGGCCCACCGGAACTATGTTCATAAAGAAAACCAC[A/T]GATATCCAGTCCCAGGATTGCCCCACCATCATTGCTGCTTATATGATGCCAACATTGGACATTGTCAGTCCCCACAACCTCCGGAGTATCACCCCACACCTGCACACCACACGCCAACACAGCTTGTCCATACTCATGGGCATCACCAGTCCAGTGAAGCATCAGAACCTGGAAGTTCCTTGGGTATAGGTTCAGGAAACAGGGAAGGATTTTTGGACTGCCCTCCATTGGATGACTCTCTGGAGTTGGGCTCTTTACAACATGAAGGCTTGACTTCCGATACACTACATGGCAAATCTGGTAAAGAGGCCTTCAATGGATTCCCATTCAATTCTGCAACTGGTGGGCAAAATATGCTAAATTCATATGGTGTGCAAGGGGAGCTAAATGGGACTCAGGGAGACATGGCAGACTCCATAGCTGGGAAACTTCGCAGTGATGTTTTGGTGGGAGAACAAGGATCCTCAGAGGAGACTGGGTTAATGGCTCCTTCAGTGGAA
Associated Phenotype:
Not determined