Busch Lab

ZMP

pabpc1a

Ensembl ID:
ENSDARG00000017219
ZFIN ID:
ZDB-GENE-030131-3238
Description:
poly A binding protein, cytoplasmic 1 a [Source:RefSeq peptide;Acc:NP_001026846]
Human Orthologues:
PABPC1, PABPC3
Human Descriptions:
poly(A) binding protein, cytoplasmic 1 [Source:HGNC Symbol;Acc:8554]
poly(A) binding protein, cytoplasmic 3 [Source:HGNC Symbol;Acc:8556]
Mouse Orthologues:
Pabpc1, Pabpc2, Pabpc6
Mouse Descriptions:
poly(A) binding protein, cytoplasmic 1 Gene [Source:MGI Symbol;Acc:MGI:1349722]
poly(A) binding protein, cytoplasmic 2 Gene [Source:MGI Symbol;Acc:MGI:1349723]
poly(A) binding protein, cytoplasmic 6 Gene [Source:MGI Symbol;Acc:MGI:1914793]

Alleles

There is 1 allele of this gene:

Allele Name Consequence Status Availability
sa39135 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa39135
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000024729 Nonsense 608 634 14 15
Genomic Location (Zv9):
Chromosome 16 (position 58374519)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 55142375
GRCz11 16 54850400
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATCTGTGTACGCTCCTCTGGTTAATACTGATGTGTGTGTTCCAGGTGGAT[G/T]AAGCAGTAGCAGTGCTGCAGGCTCACCAGGCCAAAGAAGCAGCACAGAAA
Long Flanking Sequence:
AGCTTGACTTAAAATAGAATAGTGATTCATATAATGCAGGTGAATAAAATTAGGTTATATTAAGACAGATAATACTTTATTCATAAGTAAATTATTTATAGAGGATTTAAGAGTAAACAGAAGTTGAAATTTGGTAAATTTTTCTGATTTTATTTAGCATGCATATATGAGGTTTATATGTTTGTGTGTATGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACACACACAAGTAAATTATTACAATATATATTTAGTTATTTATTTACAAGCTTAGATTAATTAATATAAATCTTTATTTTGAGTTAATACTTGCATAGCCAATATAAAGAGGCTACTTTAAGGCTTCATGCTTGTTTAAACTCTCCTGTTCTTTCTCTGCACACTGTGTATATCTGTGTACGCTCCTCTGGTTAATACTGATGTGTGTGTTCCAGGTGGAT[G/T]AAGCAGTAGCAGTGCTGCAGGCTCACCAGGCCAAAGAAGCAGCACAGAAATCAGTGCCCAGTCCTGCTGTGCCCGCCGTCTAACACAAGGTCAGATCAGCATATTAAAGGGTTTGTTCACACAAAAATGGACAGTAGTCCACTATTTACTCACTCAAGGCATCCCTGGGTGTTTGTGATATGAAGCTACGGGAAAAAACCTTTCCAGGATGATAGCGGGATAGAACTGTAAAATACAGGAGAATCCTGGGAAAAACCAGAGGGTTGACAGATATGATAAAGGCACATAACATTTATTTAATTCTTCTAGCCTTTTCCATTTCAGCTACAATCTGACATGTGTCGTCTTTAGATCTAGCTTAAATCTGTGCAGTTAAGCGTTAAAGACTGGCCATCATTTAAGTCCAACATGCCATTGTTATGTCTGTGTTTGTAAAGTGGGGGTGACGAGGTTTATTTAGGTGTTTAATCTGTGTCTTTGCTTGACTCTTGTTGGAATGC
Associated Phenotype:
Not determined