ZMP
tcirg1
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to H.sapiens ATPase, H+ transporting, lysosomal V0 subunit [Source:UniProtKB/T
Human Orthologue:
TCIRG1
Human Description:
T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3 [Source:HGNC Symbol;Acc
Mouse Orthologue:
Tcirg1
Mouse Description:
T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 Gene [Source:MGI Symbol
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa1773 | Nonsense | Confirmed mutation in F2 line | Not yet available |
Mutation Details
Allele Name:
sa1773
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000033405 | Nonsense | 581 | 823 | 15 | 20 |
| ENSDART00000136419 | None | None | 117 | None | 3 |
| ENSDART00000145354 | Nonsense | 581 | 666 | 15 | 16 |
Genomic Location (Zv9):
Chromosome 1 (position 45340428)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 44183647 |
| GRCz11 | 1 | 44884950 |
KASP Assay ID:
554-1766.1 (used for ordering genotyping assays)
KASP Sequence:
GTGAGCAGTGTGTTCCTGGTGTTGATTCCTGAGTTAGTGTTCATGTTGTG[T/A]CTTTTCGGGTACCTGGTCTTCATGGTGGTGTTTAAATGGATTGCGTTTGG
Long Flanking Sequence:
TGCCCTTGTTTTACTCTCTTGTTTTGTTTTTGTTCCTCTGGCTTGGTTTAGTGATGAAACTTTGAGGAGCAACCAGTACCTCACGTTGGATCCTAATATAACTGGAGTATTCCAGGGACCATATCCATTCGGCATTGACCCGGTAAGCACGTTTCTGATCAGATCCTCCCTGTCTTGCTCTCTGCGAGGTTCAGATTTTGATTTCACTGTTTCCTGGTTCTTAGATCTGGAGTCTTGCCAATAACCACCTCACCTTCCTCAATTCCTACAAGATGAAGATGTCTGTGATCATCGGGGTCATCCACATGACGTTCGGGGTCTGCTTATCCTTCTTTAACTACATGTAAGCCATCATATGTCTGGTTTTCTCTGGTTTTAATGATCTGCAGTGTGTTTATTTAGTATACCTATCCATGAACTCTTTTTTTTTTTTTCAGGTACTTTGGGAACGTGAGCAGTGTGTTCCTGGTGTTGATTCCTGAGTTAGTGTTCATGTTGTG[T/A]CTTTTCGGGTACCTGGTCTTCATGGTGGTGTTTAAATGGATTGCGTTTGGACCTCAGGATTCAGACCGTGCTCCCAGCATACTGATCCACTTCATTGACATGTTCCTGTTCTCCGAGAATCCAAGCAACCCACCACTTTATCCTAGACAGGTAAGAGAACCAGTCACATACTGATTAGTTTTCAACATAGTTTAGTCATACTTTTACTGCCACGACTAATATACATCTCACTTTCTTTAGATGACAGTGCAGAGGATATTAGTGTGTTTGGCTCTACTAGCGGTTCCAGTGCTGTTACTGGGAAAACCACTTCAGCTCTACTTCCAGCATAGGAACAGCAGGAGAACGGTAAACATGAGGGAAACCTCTGACTCATAGATGGGTAGATCGTGATAGTAAACAAGCAATGAAAACAGCTTGTTATGATTATCAGGGTTCATACACATTTTTACTACTAAAATTCCATGATTTTTCCATGACTATCAAGTGACCTAATGTTT
Associated Phenotype:
Not determined