Busch Lab

ZMP

tfa

Ensembl ID:
ENSDARG00000016771
ZFIN ID:
ZDB-GENE-980526-35
Description:
transferrin-a [Source:RefSeq peptide;Acc:NP_001015057]
Human Orthologues:
LTF, TF
Human Descriptions:
lactotransferrin [Source:HGNC Symbol;Acc:6720]
transferrin [Source:HGNC Symbol;Acc:11740]
Mouse Orthologues:
1300017J02Rik, Ltf, RP24-421P3.2, Trf
Mouse Descriptions:
RIKEN cDNA 1300017J02 gene Gene [Source:MGI Symbol;Acc:MGI:1919025]
lactotransferrin Gene [Source:MGI Symbol;Acc:MGI:96837]
signal recognition particle receptor subunit beta [Source:RefSeq peptide;Acc:NP_033301]
transferrin Gene [Source:MGI Symbol;Acc:MGI:98821]

Alleles

There are 6 alleles of this gene:

Allele Name Consequence Status Availability
sa32879 Essential Splice Site Available for shipment Available now
sa19720 Essential Splice Site Available for shipment Available now
sa12059 Nonsense Available for shipment Available now
sa44526 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa32878 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa15651 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa32879
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000003845 None None 675 None 17
ENSDART00000108611 None None 673 None 17
ENSDART00000124119 None None 286 None 6
ENSDART00000125647 None None 674 None 18
ENSDART00000127207 Essential Splice Site 152 169 9 9
Genomic Location (Zv9):
Chromosome 2 (position 16590088)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 17114895
GRCz11 2 16783485
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAACTATATAATACATTTTGGATATGCTAAAATGTTTATTATGCTTTTTT[G/A]TGTTCTCCAGCTGTGTCAGAATTCTTCTCGAGCAGTTGTGTCCCTGGTGT
Long Flanking Sequence:
TATTGTTGCACTCTCAGAAATAAAAGTATAAGAGTTGTCACCAGGGCAGTCCCTTTTCAAATGATTATTTTTAGGTAATGTATAACTTTAAGATACCAATATGGAACATTCTGTTAAAAAAGAAGCACCTCAGTGGCAGTTCCCATACTTTTTTTTTTTTTTTTAAGAGAGTGGAAACTAAGGTAGTTGTAGTATTTTAAATATAGGGGTATAGGTTTGAGGTCTGCTTTGTAACTATTATTAAATAGGCAATTTGCTACCCATGCTAATGTACTATTGCTACACTGCTAAAAATATTCTTACTTTAATTACTTTAAAGTAATTTTTTACTTTAAGTTTTGTCTTGTGTCTAGTCCAAATTGAACTGTACTATATTTAGTAAATCTTGATTTTATTTATTACTCCCAAAATCTTTATGTTCATTTGTTGATTGATTGACGGATTGTTGAGCAACTATATAATACATTTTGGATATGCTAAAATGTTTATTATGCTTTTTT[G/A]TGTTCTCCAGCTGTGTCAGAATTCTTCTCGAGCAGTTGTGTCCCTGGTGTATCTAAACCCAAATACCCAAACCTGTGCAAAGCCTGTCAGGGTGACTGCAGCTGCTCACACAACGAGAAGTACTTCGGTGATGACGGAGCCTTCCAGTATGAGCCACACTAATACAATCCCTTATATAAGTATACACCAAGTTCAATTTCAAGTAAAAACAAAGAAAAAAACTGTTATAATTTAAAATAGTAAACACACTATAATCAATCTATGAGTACTATACTTGAATTCAGTATTGTGATTAGATTAGACCACTTTTTAATTGATTACACTCAAACTGTAAATGAGTTCACGACTAGTTAATCACTACATTTTTCATTTGGACTGCCACTTTACACTAAAAGTAAACTTATAGTTACTAGTTTAATACTTTTATATGACACTGAACCACAAAACAAGTCTAATGTTGCATGAGTATATTGTATGAGTCAAAATGATCCTTCTTTTAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa19720
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000003845 Essential Splice Site 204 675 5 17
ENSDART00000108611 Essential Splice Site 204 673 5 17
ENSDART00000124119 Essential Splice Site 214 286 4 6
ENSDART00000125647 Essential Splice Site 205 674 6 18
ENSDART00000127207 None None 169 None 9
Genomic Location (Zv9):
Chromosome 2 (position 16589940)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 17115043
GRCz11 2 16783633
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCAGCTGCTCACACAACGAGAAGTACTTCGGTGATGACGGAGCCTTCCAG[T/C]ATGAGCCACACTAATACAATCCCTTATATAAGTATACACCAAGTTCAATT
Long Flanking Sequence:
TTTTTTTTTTTTTTTTAAGAGAGTGGAAACTAAGGTAGTTGTAGTATTTTAAATATAGGGGTATAGGTTTGAGGTCTGCTTTGTAACTATTATTAAATAGGCAATTTGCTACCCATGCTAATGTACTATTGCTACACTGCTAAAAATATTCTTACTTTAATTACTTTAAAGTAATTTTTTACTTTAAGTTTTGTCTTGTGTCTAGTCCAAATTGAACTGTACTATATTTAGTAAATCTTGATTTTATTTATTACTCCCAAAATCTTTATGTTCATTTGTTGATTGATTGACGGATTGTTGAGCAACTATATAATACATTTTGGATATGCTAAAATGTTTATTATGCTTTTTTGTGTTCTCCAGCTGTGTCAGAATTCTTCTCGAGCAGTTGTGTCCCTGGTGTATCTAAACCCAAATACCCAAACCTGTGCAAAGCCTGTCAGGGTGACTGCAGCTGCTCACACAACGAGAAGTACTTCGGTGATGACGGAGCCTTCCAG[T/C]ATGAGCCACACTAATACAATCCCTTATATAAGTATACACCAAGTTCAATTTCAAGTAAAAACAAAGAAAAAAACTGTTATAATTTAAAATAGTAAACACACTATAATCAATCTATGAGTACTATACTTGAATTCAGTATTGTGATTAGATTAGACCACTTTTTAATTGATTACACTCAAACTGTAAATGAGTTCACGACTAGTTAATCACTACATTTTTCATTTGGACTGCCACTTTACACTAAAAGTAAACTTATAGTTACTAGTTTAATACTTTTATATGACACTGAACCACAAAACAAGTCTAATGTTGCATGAGTATATTGTATGAGTCAAAATGATCCTTCTTTTATGCCGAAGCAAATCATTAGAATATGAAGTAATTATCATGTTCTATGTCACAGATGTCAAACTCAGTTCCAAAAGGGCCGCAGCTCTGCACAGTTTAGTTCCAACCCTAATTAAACACACCTGATCAAACTAATTGAGACCTTCAGGCTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12059
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000003845 Nonsense 267 675 7 17
ENSDART00000108611 Nonsense 267 673 7 17
ENSDART00000124119 Nonsense 277 286 6 6
ENSDART00000125647 Nonsense 268 674 8 18
ENSDART00000127207 None None 169 None 9
Genomic Location (Zv9):
Chromosome 2 (position 16587983)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 17117000
GRCz11 2 16785590
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGAGAGCCTGCCCGCACTGTCATTGCTCGCACCGATACTGATTTACAATA[T/A]GTTTATGATGTCCTGAAGCAGATTCCGGTATGCCCTTACAGTGTCACATA
Long Flanking Sequence:
TATAGGTCAAGCCAACTTTTGTCAGTGTCTGTCAGCATAAATCAAGGACACTTTATAGTGTGATTTATTAAGAACTACATGTAAAATATGCTGAAACTATAGTTAAAAAAAAAACTACAATGACATTAACTTATTTTCCCCATGTCTTCTATATGGACATTAATATGTCTTACAAATATGAAATATTTTTTCAGGTGCCTGAAAAATGATAATGGACAGGTTGCATTTGTTTGCCACCATGCAATCCCAGGTCGGTCAATATCTTTACCCAAAATCTTAAATGTTTTCTCTGTCTATGTCACAAAGCTGCTGGTTATAATACCAAGGTTTCTGGTTACAAGCTTCTTGTCTGTTGTGAATTTTTAAGAGAGTGAGAGGCAGAACTACGAGCTGTTGTGCATGGACGGCAGCAGGAAAAGTGTGGAGGATTATAAGACATGCAACTTCGCCAGAGAGCCTGCCCGCACTGTCATTGCTCGCACCGATACTGATTTACAATA[T/A]GTTTATGATGTCCTGAAGCAGATTCCGGTATGCCCTTACAGTGTCACATAAGTAACCTAACTACATTTCTGTTTAAGAACGCCTGTCCCCTTTAGAGATAAACAATGTCAATGTTAGAAACAAAAGGGAGTAAGATTGTTCTAGATCAGTGAAATCCAACTGAATGTTTAAACGTTTTGCTCAACAGGCCTCAGATCTTTTCTCTTCTCAAGCTTTTGGTGGTAAAGACCTGATTTTCTCAGACTCTGCGACTGAGCTGATGCTGCTTCCTAAAAGAACAGACTCCCTCCTCTACCTGAAGGAAGAATATTATGAGGCCATGCAAGCCTTTAAAGGTGACTAGAATTTTATTTATTTTTGTGCCAAATATTCAGATGAACATTGACACCATTGCATTCAAGAGTAACATTTCTTGTAGTTTTCTTATACATTTCTTATACATTTCATTTTAGACTTCTTTGACAAAAAGAAAGTTGACTGATTATTCTGCTTAGCCAATC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa44526
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000003845 Essential Splice Site 408 675 11 17
ENSDART00000108611 Essential Splice Site 408 673 11 17
ENSDART00000124119 None None 286 None 6
ENSDART00000125647 Essential Splice Site 409 674 12 18
ENSDART00000127207 None None 169 None 9
ENSDART00000003845 Essential Splice Site 408 675 11 17
ENSDART00000108611 Essential Splice Site 408 673 11 17
ENSDART00000124119 None None 286 None 6
ENSDART00000125647 Essential Splice Site 409 674 12 18
ENSDART00000127207 None None 169 None 9
Genomic Location (Zv9):
Chromosome 2 (position 16585907)
Other Location(s):
Assembly Chromosome Position
GRCz11 2 16787666
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGAATTGACATTTTTGATGAAACCTAACATTTTATTCACTACTCTTTTGC[A/C]GAAAGCTGCTCTAGTGGTTCAGGAGGTAAATATTACTATAATTATTTGGT
Long Flanking Sequence:
CGTAAGATTGAACATGACCTCATCAGTTCATAAGACATTTATTGCAATATGTTACATGGGTAGAAAATACATTATACAAGTCAAAATTATTTTTGTTTATGCCCAATATCATCAGAATATCAAGTAAATATCATCTTTTATTAAGAATGTTTGTACATTTCCTTCTGTAAATCTGTCAAAACTTAATTATTGATTAGCAATGAGTATTGTTAATTATTTAATTAGGAAAACTGTGATGTCAGTTTTCTCAATTCTTAGATTTTTTTTAACCTTTATATTTCAGATATACAAATAGTTTTATCTCGATCAAATATGATCCCAATCTCAACACACCGAATATCAATGAGAATCTTATTCATTCAGCTTTCATGTGTATAGATATAAATCAGGTGTATGAATCTCAATTTTCAAAAGCTGACTCTTATGGTTTTGTGGTTTACTGTCACCTTTAGAATTGACATTTTTGATGAAACCTAACATTTTATTCACTACTCTTTTGC[A/C]GAAAGCTGCTCTAGTGGTTCAGGAGGTAAATATTACTATAATTATTTGGTACTGATCTGCATTCATTCATCCTGTCAGCCATTTTCTGTGATCTAATTTGGTCTTAAGTGTTGTTTACACCGATGACAATGAGAAGAATTCTATAGTTTACAAAAAAAAAAAAAAAAAACAGTTTTAAACATAAAGGAATAGCAGTGTCTACCTTACAGCCATAATAATGATGACTTTTTAGGCTGATGAATGAATTAACATTTTTTGTATTTTGTGATTCATGTTTTTTCCTCCCTGTATATTTCTGCTTTTAAATTGCATAATGGCACATGGATCTTTCTTCCAACAACTTTTAACCTTCAAAAATTGGAAAAAGTTTTTTTTTTTAAATTTAGGTCTCATTAAGTGCTTTGAAATATGATTTTTTTTTTTATTTGATGTTTGAAATAATCTCAACTAAAAAACGAAAACAGGGTGGGACATTGAGTAGCTCCCATTTTAAAAAAGCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32878
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000003845 Essential Splice Site 408 675 11 17
ENSDART00000108611 Essential Splice Site 408 673 11 17
ENSDART00000124119 None None 286 None 6
ENSDART00000125647 Essential Splice Site 409 674 12 18
ENSDART00000127207 None None 169 None 9
ENSDART00000003845 Essential Splice Site 408 675 11 17
ENSDART00000108611 Essential Splice Site 408 673 11 17
ENSDART00000124119 None None 286 None 6
ENSDART00000125647 Essential Splice Site 409 674 12 18
ENSDART00000127207 None None 169 None 9
Genomic Location (Zv9):
Chromosome 2 (position 16585907)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 17119076
GRCz11 2 16787666
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGAATTGACATTTTTGATGAAACCTAACATTTTATTCACTACTCTTTTGC[A/C]GAAAGCTGCTCTAGTGGTTCAGGAGGTAAATATTACTATAATTATTTGGT
Long Flanking Sequence:
CGTAAGATTGAACATGACCTCATCAGTTCATAAGACATTTATTGCAATATGTTACATGGGTAGAAAATACATTATACAAGTCAAAATTATTTTTGTTTATGCCCAATATCATCAGAATATCAAGTAAATATCATCTTTTATTAAGAATGTTTGTACATTTCCTTCTGTAAATCTGTCAAAACTTAATTATTGATTAGCAATGAGTATTGTTAATTATTTAATTAGGAAAACTGTGATGTCAGTTTTCTCAATTCTTAGATTTTTTTTAACCTTTATATTTCAGATATACAAATAGTTTTATCTCGATCAAATATGATCCCAATCTCAACACACCGAATATCAATGAGAATCTTATTCATTCAGCTTTCATGTGTATAGATATAAATCAGGTGTATGAATCTCAATTTTCAAAAGCTGACTCTTATGGTTTTGTGGTTTACTGTCACCTTTAGAATTGACATTTTTGATGAAACCTAACATTTTATTCACTACTCTTTTGC[A/G]GAAAGCTGCTCTAGTGGTTCAGGAGGTAAATATTACTATAATTATTTGGTACTGATCTGCATTCATTCATCCTGTCAGCCATTTTCTGTGATCTAATTTGGTCTTAAGTGTTGTTTACACCGATGACAATGAGAAGAATTCTATAGTTTACAAAAAAAAAAAAAAAAAACAGTTTTAAACATAAAGGAATAGCAGTGTCTACCTTACAGCCATAATAATGATGACTTTTTAGGCTGATGAATGAATTAACATTTTTTGTATTTTGTGATTCATGTTTTTTCCTCCCTGTATATTTCTGCTTTTAAATTGCATAATGGCACATGGATCTTTCTTCCAACAACTTTTAACCTTCAAAAATTGGAAAAAGTTTTTTTTTTTAAATTTAGGTCTCATTAAGTGCTTTGAAATATGATTTTTTTTTTTATTTGATGTTTGAAATAATCTCAACTAAAAAACGAAAACAGGGTGGGACATTGAGTAGCTCCCATTTTAAAAAAGCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15651
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000003845 Essential Splice Site 608 675 16 17
ENSDART00000108611 Essential Splice Site 606 673 16 17
ENSDART00000124119 None None 286 None 6
ENSDART00000125647 Essential Splice Site 607 674 17 18
ENSDART00000127207 None None 169 None 9
Genomic Location (Zv9):
Chromosome 2 (position 16581925)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 17123058
GRCz11 2 16791648
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TATATGTCTTACAAATAAAGTTTTAAATCCCATCTCTTATCATATGTTTC[A/T]GAGCAAAAATAATGACCTTTTCACCTCCAAAGATGGGAAAAATCTCCTTT
Long Flanking Sequence:
TTGCTTTTATTAAGCACACTGTGGTCGGGGACTACACAGATGGTTAGTGTGTTTTACTTCAATTAATATTTGACACTTTTTTAAACTGTAAGGTGTTTCAATGGTCTTATCTTTTTCTTTAAAATTCTGTCTGCTTAGGTAAAGGAAAGGACTGGGCAAAGGATTTAAAGTCAGAGGATTTTGAACTTATTTGTCCAAACACACCAGACACAACAATGAAATACACTGACTTTGAAAAGTGTAACCTTGCCCAAGTGCCAGTTCATGCTGTGATTACCCGGGAAGATGCGCGCAGTGCTGTGGTGTCCTTTTTGTCTGACATTCAAGTGAGTTTTTACAGTTCTAAGTATGTTCCTGCTGTTTCAATATTTTGTCAATATTTTGTCAGTATTTGTTTTTAAAGTTGGGTCTTATTTTACCAGTCGTCTGTTTCTACATATTTTTCCCTGTTATATGTCTTACAAATAAAGTTTTAAATCCCATCTCTTATCATATGTTTC[A/T]GAGCAAAAATAATGACCTTTTCACCTCCAAAGATGGGAAAAATCTCCTTTTCACTGATGGCACTAAATGCCTTCAAGAGATAAAAGGATCTGTGGATGATTTCCTGACGAAAAAGTACATCGATATGATTGAGAGGACCTACAAGACTAGCCAGAATGTACCAGGTATAAAATGTACCTATAATATCCTACAATGTCTGGTTCAAAATTCTAGGTCAAAACAAGTTTTAGCCATATCTTGTTGTTTTTGACTTACAAAACTGCATCCACTTACAATGCTTTATTGTAATGATTCATTCTTTTAATGTTTTTTTTTTACAGATCTGGTGAAGGCATGCACTTTTGGCAACTGTATTAGCTCCTAGTACCTATCTTACGGTCAACAAACACATCAAACAGTCAGATGTGATCAGGTTTCTGTTTTATCACAAAAGGGGATGAAATGAAATTAAAAAAATATTTCTCAAAATGATGTTTCTGAGATTGTTTTTTAAATGCAAA
Associated Phenotype:
Not determined