ZMP

sgta

Ensembl ID:

ENSDARG00000016769

ZFIN ID:

ZDB-GENE-040704-72

Description:

small glutamine-rich tetratricopeptide repeat-containing protein beta [Source:RefSeq peptide;Acc:NP

Human Orthologue:

SGTB

Human Description:

small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta [Source:HGNC Symbol;Acc:23567]

Mouse Orthologue:

Sgtb

Mouse Description:

small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta Gene [Source:MGI Symbol;Acc:MGI

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa41607	Nonsense	Mutation detected in F1 DNA	Not yet available
sa34864	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa41607

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000020665	Nonsense	160	320	6	12

Genomic Location (Zv9):

Chromosome 10 (position 15428615)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	10	15441922
GRCz11	10	15400041

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CAGCACATAGTAAACTTGAAAACTACACAGAGGCAATGGGAGACTGTGAA[C/T]GAGCGATTGCGATCGACCCATCGTACAGTAAAGCTTATGGCAGAATGGGG

Long Flanking Sequence:

GAAGACAGGATCAATAATCATTTATTCTAAATGCTCAAATGCATTTGTTTTGTTTCTTTATCAGGGAATAATCACATGAAAGAGGAGAATTACAGCAGTGCTGTCGATTGCTACACAAAAGCCATTGAGTTGGACCAAAGAAATGCAGTTTATTACTGTAACAGGTGAGCGCTTTGGTTTTATCTATGTTTCCCAACCCTGTTCTTGAAGGCACACCAACAATACACATTTTCAACCTTTCCCTAAACAAACACACCTGAATCAACTCATCAGAACATTAGAAAAGACTCCAGAACCTGAAATTAATAGGTCAGATATGGAAGACGTCCAAAATATGTATTGTTGGTGTGGCTCCTGGACAAGGGGTGGGGGAACACTGGATTATACAAAGTGTAAAAGATGTTTTTAGTGGTTGGCGTTTTGACTTCTGGGACTGTTTTCTCAGGGCTGCAGCACATAGTAAACTTGAAAACTACACAGAGGCAATGGGAGACTGTGAA[C/T]GAGCGATTGCGATCGACCCATCGTACAGTAAAGCTTATGGCAGAATGGGGTGAGATGTTACTATTTTACCCTTTCATTTTATGGTGAATATGACCAAATGTTATATTTATCTAATAATAAAGTATATAATGATAAAAGGTATCAAAAATAATGATAGCAATCTTTTCAAACAATCAATCAATCAGTCAATTTCATAAATTATTTTTATGCGATTCTAATGGATCTATCTCATTATTCAATCTCAGTAATCAGTCTCTTGAGCTTTTAATCTGACTCATGAATCTGTTCTGAATCAGTGTCATAAGATTTTAATGAATCAGTCTTGTGAATCATTCTCATGAGGTTTAGTTTCAGGAATCTGTTTTATAATTCAGTCTCAATCAGTTACATTTGTTTTTAATTCGTCTCATAAATCTGTTCTGAATCAGTGTTATAAGTTTTTGATGAATCAGTCTAATGATTCTTTCTTATAATTCAGTTTTAGGAATCAATTACATGAG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa34864

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000020665	Nonsense	216	320	7	12

Genomic Location (Zv9):

Chromosome 10 (position 15427140)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	10	15440447
GRCz11	10	15398566

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

ATCCTGAAAACGACACTTACAAATCCAACCTAAAGATTGTGGAGCAGAAA[C/T]AAAAAGAAGCCTCCAGCCCGGTGAGTAGAAACAGCTGCTTTCAGAATCAC

Long Flanking Sequence:

GTTTCATGGAATTTTATTGAATCAGTCACATCGGCATGTCTGAGGAGATTTAAAAATGCAGTCTTGTTGATTTAACTGAATCAGTCTGATGAGTCGTACTCATGAGGTTTCAATGAATCTCAACATAATGAATCAGATTCGTGAATTTGTGATGAATTTACAGTTTTAGTAAATGGTTCTAAACAAATATCTAGATAAAATACTAAAAAATCATTCAAGCAATCACTAAGGAATTAGATTCATCCAATGAATCAAAACAGAATGCAAACATTTTGATTCCCATCATCCCTGGTGAATTATACAATTAAAAATAATGAGCTCAGAATTTCAACAGTAACCCTTAAATCGCACTTACTCCTTTTTCATCTCTTTATGATTGTAGATTGGCGCTAACATCCATGAGCAAGTATCCAGAGGCGATATCATATTTCAATAAAGCTCTGGTGTTAGATCCTGAAAACGACACTTACAAATCCAACCTAAAGATTGTGGAGCAGAAA[C/T]AAAAAGAAGCCTCCAGCCCGGTGAGTAGAAACAGCTGCTTTCAGAATCACACCGTATAAGAAATATCGATCATGAAATTTGATCCTTCCCATAAAGAACTTAAGTCTATCGTATTTGTTTTAATGCATGCATATTGAATATCTCGTATGAGTAATTAAATATGAGAACTAGCCAATAATAGCTCCTGACATTAGCTTTCATATGTTGTGTTCTCACAGACGGCCACAGGACTGGGGTTTGACATGGCCAGCCTCATCAATAACCCTGCTTTCATTAGCATGGTATGCTGGAGTGCTTGGTTTCGCATTTCTCTGTTAATAGTATTTATGAAAAGGGTCATAAACTGACCCGGCGACCCCTTTCATGTGTCTGGAATGCTGCCCGTGACAGATTTAAAGGGCCAGTCGGGTGAATCTTGACTCTTCTGGAGGCTTGTGAGAGCGTGGGGTTTCTAGCACACTGCAGAGCTTGAGAAATTGGGACATATTCATAAAAAGAAC

Associated Phenotype:

Not determined