ZMP

ddx54

Ensembl ID:

ENSDARG00000016015

ZFIN IDs:

ZDB-GENE-021220-2, ZDB-GENE-021220-2, ZDB-GENE-050706-47

Description:

ATP-dependent RNA helicase DDX54 [Source:RefSeq peptide;Acc:NP_775375]

Human Orthologue:

DDX54

Human Description:

DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Source:HGNC Symbol;Acc:20084]

Mouse Orthologue:

Ddx54

Mouse Description:

DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 Gene [Source:MGI Symbol;Acc:MGI:1919240]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa26641	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa26641

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000026416	Essential Splice Site	41	862	1	21
ENSDART00000073797	Essential Splice Site	41	463	1	19
ENSDART00000128587	Essential Splice Site	41	862	1	20

Genomic Location (Zv9):

Chromosome 5 (position 75309067)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	5	71410208
GRCz11	5	72194714

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CGATGAAGAGTTTGAGGTGGCCGCAGGAGTCAAAGATGACGAAAATACCG[T/C]GAGTTTCACACGCTTTCTGTCGGAGAGTCACCGATTATGTGTGTGTTTTC

Long Flanking Sequence:

ATTATTTAATGAAGGTTTATCGTCATGATGACGTACGTCACAATAGATCATAATTCCTAACTTTATGAAATTATTATATTCTTTTTTGTGAGTGTCACTCGTTGATAGTGTACTTATTGCACTGCTACATGTGTGTTCCTATGTTCAGCAATGCAAAAGCGAACTTTATGAATGATATTAATGAAATATTCGTGCTTTAATAATCGTGTTTCATGCGCCACCGCGCGGTCCACCTCTGAACTGCAGCAGCGGCGCGCTCTGGCGTCATCTCTACGCGCCGAGACGCGCGCACACGTGTCTCACTAGCGTCTGCGGTGTTTTCATCGCACATTTCTTTAATTTCCTCGATTATCTACCATCCTTTAGAGCTTCAGAAATGGCCCAGAGAAAGAAAAAGCTGATGAGGAGGAAGAAAAGCGGCGCAAACCGCGATCACGAGCTCCAGTCCGACGATGAAGAGTTTGAGGTGGCCGCAGGAGTCAAAGATGACGAAAATACCG[T/C]GAGTTTCACACGCTTTCTGTCGGAGAGTCACCGATTATGTGTGTGTTTTCTTTAAGTCGTCAACTGATTCAGCTGTGGAGACTCAAATATTAACACAAGATTCCTCATCCACCGATAAAAGTGGACATTTGTAGAGCTTTAACATGATTTCTCCTCCAACATTAGACAAGCTGAGAACATATGAGCTGTCATGTTTCCCTGATCAGTTTAAGAAAACAGACACTGAGATATGAGACAGTAGTGTATAACCACCCAAATGCTGCTTTTGAGACTTGTTGCTGACTTTATTAATGTTTGCATCAAGCTTATTTGTGTTATAACAGCTACTATTACATATTTACAAGACTGAATTTACAACAAATCGCTCATCTGATACAGCTGTGACTGTAGTTATTAAATATGTCATATCATCACCTGATTACATTGTAACCTCCTATATGACCTACAGAAAAGAGCATTTAAGCTTAATCTATCGAAATATTGTTTTGGTTGTACTACAA

Associated Phenotype:

Not determined