Busch Lab

ZMP

ddx54

Ensembl ID:
ENSDARG00000016015
ZFIN IDs:
ZDB-GENE-021220-2, ZDB-GENE-021220-2, ZDB-GENE-050706-47
Description:
ATP-dependent RNA helicase DDX54 [Source:RefSeq peptide;Acc:NP_775375]
Human Orthologue:
DDX54
Human Description:
DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Source:HGNC Symbol;Acc:20084]
Mouse Orthologue:
Ddx54
Mouse Description:
DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 Gene [Source:MGI Symbol;Acc:MGI:1919240]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa26641 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa26641
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000026416 Essential Splice Site 41 862 1 21
ENSDART00000073797 Essential Splice Site 41 463 1 19
ENSDART00000128587 Essential Splice Site 41 862 1 20
Genomic Location (Zv9):
Chromosome 5 (position 75309067)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 71410208
GRCz11 5 72194714
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGATGAAGAGTTTGAGGTGGCCGCAGGAGTCAAAGATGACGAAAATACCG[T/C]GAGTTTCACACGCTTTCTGTCGGAGAGTCACCGATTATGTGTGTGTTTTC
Long Flanking Sequence:
ATTATTTAATGAAGGTTTATCGTCATGATGACGTACGTCACAATAGATCATAATTCCTAACTTTATGAAATTATTATATTCTTTTTTGTGAGTGTCACTCGTTGATAGTGTACTTATTGCACTGCTACATGTGTGTTCCTATGTTCAGCAATGCAAAAGCGAACTTTATGAATGATATTAATGAAATATTCGTGCTTTAATAATCGTGTTTCATGCGCCACCGCGCGGTCCACCTCTGAACTGCAGCAGCGGCGCGCTCTGGCGTCATCTCTACGCGCCGAGACGCGCGCACACGTGTCTCACTAGCGTCTGCGGTGTTTTCATCGCACATTTCTTTAATTTCCTCGATTATCTACCATCCTTTAGAGCTTCAGAAATGGCCCAGAGAAAGAAAAAGCTGATGAGGAGGAAGAAAAGCGGCGCAAACCGCGATCACGAGCTCCAGTCCGACGATGAAGAGTTTGAGGTGGCCGCAGGAGTCAAAGATGACGAAAATACCG[T/C]GAGTTTCACACGCTTTCTGTCGGAGAGTCACCGATTATGTGTGTGTTTTCTTTAAGTCGTCAACTGATTCAGCTGTGGAGACTCAAATATTAACACAAGATTCCTCATCCACCGATAAAAGTGGACATTTGTAGAGCTTTAACATGATTTCTCCTCCAACATTAGACAAGCTGAGAACATATGAGCTGTCATGTTTCCCTGATCAGTTTAAGAAAACAGACACTGAGATATGAGACAGTAGTGTATAACCACCCAAATGCTGCTTTTGAGACTTGTTGCTGACTTTATTAATGTTTGCATCAAGCTTATTTGTGTTATAACAGCTACTATTACATATTTACAAGACTGAATTTACAACAAATCGCTCATCTGATACAGCTGTGACTGTAGTTATTAAATATGTCATATCATCACCTGATTACATTGTAACCTCCTATATGACCTACAGAAAAGAGCATTTAAGCTTAATCTATCGAAATATTGTTTTGGTTGTACTACAA
Associated Phenotype:
Not determined