Busch Lab

ZMP

LOC567443

Ensembl ID:
ENSDARG00000015891
Human Orthologue:
PTPRE
Human Description:
protein tyrosine phosphatase, receptor type, E [Source:HGNC Symbol;Acc:9669]
Mouse Orthologue:
Ptpre
Mouse Description:
protein tyrosine phosphatase, receptor type, E Gene [Source:MGI Symbol;Acc:MGI:97813]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa38906 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa9616 Nonsense Available for shipment Available now
sa9880 Nonsense Available for shipment Available now
sa2648 Nonsense F2 line generated Not yet available
sa5604 Nonsense F2 line generated Not yet available

Mutation Details

Allele Name:
sa38906
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004122 Essential Splice Site 322 681 10 19
Genomic Location (Zv9):
Chromosome 12 (position 45262208)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 43338464
GRCz11 12 43401865
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGAAGCAGGTGAACCCGTCGTACGCCGGACCCATCGTCGTGCACTGCAG[G/A]TTTGGCTTCATGTGCTCTTAATGCAGGATAAATATAGAGCTGTGTGTGAA
Long Flanking Sequence:
CTAATGTTGCGTTATTAATGAAATAAAATTTTGACAGTGCATTTATTTTACTCTATAATTTGTCATTGGTAAAGTTGCATTGTTTTTACATGTTATGAGCTTTCAAACAGCATAAGAACACATTTTTTCCTGCAAATAAGTTACTAATTGTGGCATGTTGCAAACTATTAGCGTCTTTTGTTTTACTGATGACATCACCAGCGACTAGCCGACTTTATTTTATAACATGAAAGTCAACTTCTAAAAATCATTCAGCCTCTAATGGCTGCTCGAACGTGAAGATTAAGCTCATTAAACTAGCATAAAACATTATATTTGTGTGTATTCTTGTTTCAGCAGGCCAGTGACGGCAGTAAAAGCCCTCGCCTGGTCACTCAGCTCCACTTCACCAGCTGGCCAGATTTCGGCGTGCCATTTTCCCCCATCGGGATGCTAAAGTTCCTGAAGAAGGTGAAGCAGGTGAACCCGTCGTACGCCGGACCCATCGTCGTGCACTGCAG[G/A]TTTGGCTTCATGTGCTCTTAATGCAGGATAAATATAGAGCTGTGTGTGAACACACGCTTCTGCTGTCAAGTCTGAGCGTTAGTGTGAAGTGTGAAGCTATTTAGATGCACACATTTACATGCAAGATATTGCATGTTAATATGCACACATAGTGAACGTGTGTGTAACGTGTGCATGGTTTTATCTCGGAGAAATGTGTTATACACACAATCAATTTTAGTGTTTTAAACGATATTACCAATTCATTTAGTTTTAATTGCTTTACAGTCAGAAATGTGTATGCAGGTTGAATTATTTAGTTTTTAGGATTGGAGAATTAATGACTAATAATGTAACAAATAATCAAACGAAGAAATTCAATAATGAATGAAGAAATTAGGTACATCTATTTTTAAATAGAAGGGATGTGAAATCAAATATGCAGTTATTTACATTTAAAATGTTTCTTTCTATATGTAACGGAGGCCAGCTAGTGTGTGCTGTGCAGGTAAACCTCACTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa9616
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004122 Nonsense 359 681 11 19
ENSDART00000004122 Nonsense 359 681 11 19
Genomic Location (Zv9):
Chromosome 12 (position 45256279)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 43332535
GRCz11 12 43395936
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACACGGAGCAGAAGGTGGACGTGTTCGGGTTYGTGTCCCGCATCCGTGAA[C/T]AGAGATCTCAGCTCATCCAGACAGACGTGAGGGCGCTTCTCTGTTCTTCA
Long Flanking Sequence:
AATTCCTAATTATGATGACTTAACGTAAAGAATATAATTATTAAAATACATTATACATGAACATATTACTATTATGATGCATAAAACATTTTTGAATATCATTAATTTATTTTGTCTCTGAATGGGAAAATTCAGTCAAAATTAGTGACAGTTTTACTGTAATAAACTAGTAAATTGGTCAAAGTATTAAACATAATAAATATGATGAATTAAATATATTGTTTTACATTTGTATGTTCAGTATATAATGCAGTATGTTATTACTTTATATTTTAGAAATTACAATTCTAGTAAATCTACATTTGAATTTCTTTACATTAAAAGAGGATTGGGTTGAAAATGCATGTAAGAGAATTCACAGAGAGTGAAAATGTTTGTGTCTCTCCATCAGTGCTGGCGTGGGCCGGACAGGAACCTTCATCGTCATTGATGCCATGATTGATATGATGCACACGGAGCAGAAGGTGGACGTGTTCGGGTTTGTGTCCCGCATCCGTGAA[C/T]AGAGATCTCAGCTCATCCAGACAGACGTGAGGGCGCTTCTCTGTTCTTCAGCACACACTCACTCTATTTATTACAGGCAGACTTAAGAATACTGAATACAGTATATGAAATGTGTGTGTTTATGTGTGCATGTGTGTGTGTACGTGTGTGTTTGTGTGTGTACATGTGTTTGCGTGTTGCTGTGTGTGTGTTTGTCTGTGTTTGTTTGTGTGTGTCTATGTGTTCTTGTGATTGTGTGTTTTTGTGTAATTGTGTGTTTCTTTGTGTGTGTAGTTGCAGTACTCGTTCGTCTATCAGGCTCTGCTGGAGTATTTTCTGTATGGAGACACAGAGCTGGACGTCTCTTCTCTTGAAGGACACCTGCAGAAACTGCACAACACCAATGCTCCGCTGGACCGCGTCGGCCTCGAGGAGGAGTTTAAGGTCAGCTTCTTCACTCACACCCATCCCTCAAACAGCACCTTTACATACACACACTGATGTTTCTAGACACCTGCTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa9880
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004122 Nonsense 359 681 11 19
ENSDART00000004122 Nonsense 359 681 11 19
Genomic Location (Zv9):
Chromosome 12 (position 45256279)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 43332535
GRCz11 12 43395936
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACACGGAGCAGAAGGTGGACGTGTTCGGGTTYGTGTCCCGCATCCGTGAA[C/T]AGAGATCTCAGCTCATCCAGACAGACGTGAGGGCGCTTCTCTGTTCTTCA
Long Flanking Sequence:
AATTCCTAATTATGATGACTTAACGTAAAGAATATAATTATTAAAATACATTATACATGAACATATTACTATTATGATGCATAAAACATTTTTGAATATCATTAATTTATTTTGTCTCTGAATGGGAAAATTCAGTCAAAATTAGTGACAGTTTTACTGTAATAAACTAGTAAATTGGTCAAAGTATTAAACATAATAAATATGATGAATTAAATATATTGTTTTACATTTGTATGTTCAGTATATAATGCAGTATGTTATTACTTTATATTTTAGAAATTACAATTCTAGTAAATCTACATTTGAATTTCTTTACATTAAAAGAGGATTGGGTTGAAAATGCATGTAAGAGAATTCACAGAGAGTGAAAATGTTTGTGTCTCTCCATCAGTGCTGGCGTGGGCCGGACAGGAACCTTCATCGTCATTGATGCCATGATTGATATGATGCACACGGAGCAGAAGGTGGACGTGTTCGGGTTTGTGTCCCGCATCCGTGAA[C/T]AGAGATCTCAGCTCATCCAGACAGACGTGAGGGCGCTTCTCTGTTCTTCAGCACACACTCACTCTATTTATTACAGGCAGACTTAAGAATACTGAATACAGTATATGAAATGTGTGTGTTTATGTGTGCATGTGTGTGTGTACGTGTGTGTTTGTGTGTGTACATGTGTTTGCGTGTTGCTGTGTGTGTGTTTGTCTGTGTTTGTTTGTGTGTGTCTATGTGTTCTTGTGATTGTGTGTTTTTGTGTAATTGTGTGTTTCTTTGTGTGTGTAGTTGCAGTACTCGTTCGTCTATCAGGCTCTGCTGGAGTATTTTCTGTATGGAGACACAGAGCTGGACGTCTCTTCTCTTGAAGGACACCTGCAGAAACTGCACAACACCAATGCTCCGCTGGACCGCGTCGGCCTCGAGGAGGAGTTTAAGGTCAGCTTCTTCACTCACACCCATCCCTCAAACAGCACCTTTACATACACACACTGATGTTTCTAGACACCTGCTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa2648
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004122 Nonsense 599 681 17 19
ENSDART00000004122 Nonsense 599 681 17 19
Genomic Location (Zv9):
Chromosome 12 (position 45242476)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 43318732
GRCz11 12 43382133
KASP Assay ID:
554-3050.1 (used for ordering genotyping assays)
KASP Sequence:
CAGCCGAAGGTAAAGGGATGATCGACATCATCGCAGCGGTTCAGAAACAG[C/T]AGCAGCAGTCGGGAAACCACCCCATCATTGTGYACTGCAGGTACAACACA
Long Flanking Sequence:
GAATGAAGGAAGAAACTCATAAAGCATTAAAACCACTCGAGAGTGAGTAAATAGTGAGTACATTTTTTTTTTTTGGGTGAACTATCCCTTTAAGACTATTAAAGTATTGATATTTACACCCAAAAAGCTTTCATTTTGACTTCATGGGGACTTTTTAGTATTTTTACTATGCTTTTTTTCTCTACGAGTTTTAAAAGGTCTTTGTTAAAGTGCTGTGCTGCCAGCAATGATGAACTAAACCAAGCAGAAACACCGAGAATCACAACATCGCAAACTATATCTCAAGCAAAGCAGAATCTGAAAATCAGACCATTTTCATCATCTCACCATCAAAGTTTTTTTTGGGGGGAGTGAATATGTGGATTTACTGTGTGTGTTTTGTTCAAAAGGAGAAGCAGACGCGTTTGGTTCGACACTTTCATTTCCACGGTTGGCCAGAGATCGGGATCCCAGCCGAAGGTAAAGGGATGATCGACATCATCGCAGCGGTTCAGAAACAG[C/T]AGCAGCAGTCGGGAAACCACCCCATCATTGTGCACTGCAGGTACAACACACACACACACACACACACACACACACTCCACTCGCTGTCTAAAACTACTGATACTGTATGATGGATTGTATGATGAATTATTTTAGAAAGGCTTTATCTCTGAAACCTTCATGAAACTGATGTGTGTTTTTCCCACTGTCTGTCTGTCTGTGTGTGTGCAGTGCGGGTGCGGGTCGGACCGGTACGTTTATTGCTCTCAGTAATATCCTGGAGCGAGTGAAAGCCGAGGGTTTGCTGGATGTGTTTCAGACTGTCAAGAGTTTACGAATGCAGCGGCCACACATGGTGCAGACAGTGGTATGTGTAATTAATAATAATATTTAAAACATATTTGTGTTTAATATTCCTCCCATTATTATGAATCGTATGTTTAATACCAATTTTAATGTATTTTATTGTCTTTTAATAAAAGGGATATAAATGAATATATATTTCAATAATGAGTAAAGTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa5604
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000004122 Nonsense 599 681 17 19
ENSDART00000004122 Nonsense 599 681 17 19
Genomic Location (Zv9):
Chromosome 12 (position 45242476)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 43318732
GRCz11 12 43382133
KASP Assay ID:
554-3050.1 (used for ordering genotyping assays)
KASP Sequence:
CAGCCGAAGGTAAAGGGATGATCGACATCATCGCAGCGGTTCAGAAACAG[C/T]AGCAGCAGTCGGGAAACCACCCCATCATTGTGYACTGCAGGTACAACACA
Long Flanking Sequence:
GAATGAAGGAAGAAACTCATAAAGCATTAAAACCACTCGAGAGTGAGTAAATAGTGAGTACATTTTTTTTTTTTGGGTGAACTATCCCTTTAAGACTATTAAAGTATTGATATTTACACCCAAAAAGCTTTCATTTTGACTTCATGGGGACTTTTTAGTATTTTTACTATGCTTTTTTTCTCTACGAGTTTTAAAAGGTCTTTGTTAAAGTGCTGTGCTGCCAGCAATGATGAACTAAACCAAGCAGAAACACCGAGAATCACAACATCGCAAACTATATCTCAAGCAAAGCAGAATCTGAAAATCAGACCATTTTCATCATCTCACCATCAAAGTTTTTTTTGGGGGGAGTGAATATGTGGATTTACTGTGTGTGTTTTGTTCAAAAGGAGAAGCAGACGCGTTTGGTTCGACACTTTCATTTCCACGGTTGGCCAGAGATCGGGATCCCAGCCGAAGGTAAAGGGATGATCGACATCATCGCAGCGGTTCAGAAACAG[C/T]AGCAGCAGTCGGGAAACCACCCCATCATTGTGCACTGCAGGTACAACACACACACACACACACACACACACACACTCCACTCGCTGTCTAAAACTACTGATACTGTATGATGGATTGTATGATGAATTATTTTAGAAAGGCTTTATCTCTGAAACCTTCATGAAACTGATGTGTGTTTTTCCCACTGTCTGTCTGTCTGTGTGTGTGCAGTGCGGGTGCGGGTCGGACCGGTACGTTTATTGCTCTCAGTAATATCCTGGAGCGAGTGAAAGCCGAGGGTTTGCTGGATGTGTTTCAGACTGTCAAGAGTTTACGAATGCAGCGGCCACACATGGTGCAGACAGTGGTATGTGTAATTAATAATAATATTTAAAACATATTTGTGTTTAATATTCCTCCCATTATTATGAATCGTATGTTTAATACCAATTTTAATGTATTTTATTGTCTTTTAATAAAAGGGATATAAATGAATATATATTTCAATAATGAGTAAAGTA
Associated Phenotype:
Not determined