Busch Lab

ZMP

mmp13b

Ensembl ID:
ENSDARG00000015797
ZFIN ID:
ZDB-GENE-030131-6152
Human Orthologue:
MMP13
Human Description:
matrix metallopeptidase 13 (collagenase 3) [Source:HGNC Symbol;Acc:7159]
Mouse Orthologue:
Mmp13
Mouse Description:
matrix metallopeptidase 13 Gene [Source:MGI Symbol;Acc:MGI:1340026]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa562 Essential Splice Site Available for shipment Available now
sa35941 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa562
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033206 Essential Splice Site 164 464 3 10
Genomic Location (Zv9):
Chromosome 15 (position 32042936)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 33973611
GRCz11 15 33831590
KASP Assay ID:
554-0472.1 (used for ordering genotyping assays)
KASP Sequence:
GAAAACGTTTGATGGAACTGCCGACATCATGATCAGCTTTGGAACAAAAG[G/A]TACCACCGTTTGTGTCATTTATGCAGGATTCACTGCAGGGTGTTTATCCT
Long Flanking Sequence:
TTCAGCATCTGCCTGCATTAATTGTATTAAAATAGATCAATCGACAGCCCAAGTATATATATTAAGGGAAAACAATAAAAGGATGCAGATATGGACAGTTTGGACAATACCAAAAACCAATAACTCTTTACATTTGAAAGCCGACAATCGATATATGATGCAATAAATATATAAATCATTTTTATAACTCTAATTTGCTAAATCAAAACACGACAAAATACAGTGCTCAATTGATTCTATTTAAAAAAAACTAACTTTTTAGTTTTTTTAGCAATAATTCACAGATATTTATCATATTTAAAAGGAAACATATAAATAAAGCAACCAATATATTGTTCATTTTATTCGCAGGATTCTGAACTACACTCCTGATCTGAAGAAGAAGGTTGTGGACAGAGCCGTAAGAAAAGCACTGAACGTCTGGAGCAAAGTGACCCCGCTGAGATTCACGAAAACGTTTGATGGAACTGCCGACATCATGATCAGCTTTGGAACAAAAG[G/A]TACCACCGTTTGTGTCATTTATGCAGGATTCACTGCAGGGTGTTTATCCTTTCTTCAAATCCTCATACGTTTTTGTATATGTGAATGGCAGAACATGGAGACTTCAACCCGTTTGATGGACCTGAAGGTCTTCTTGCTCATGCGTATCCTCCTGGAATCGGCATTGGTGGTGATACACACTTTGACGAGGATGAAACATGGACTGAAGACTATCATGGTACAAAAGGAACCAAAACAGTCACACATTCATTCATGTATCTGGTTTACGAGGACCTCTACCCCTAAACAAAACCCTCACAAGAAACCTGAAGGAAATTTTGAATGTCAAAAGACCTCGTTATGTATGATTTTTTGACCATTTTGAATTACGAGGACATAACACATGTCCTCATACACCACATTAATGTAATACAACTACATGCTATCATACTATTTTGTATCCTTGTAAACCACATAAACTTGTACACACATACACACACACACACACACACAAAGATATA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa35941
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000033206 Nonsense 434 464 10 10
Genomic Location (Zv9):
Chromosome 15 (position 32047923)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 33968624
GRCz11 15 33826603
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACACCAATGCATGAATGTTAATAACTGTTTGTATTTTTTAACAGGATACT[T/A]GAACTTGTATCATGAACATACTCAGTTTGAGTACAGTTACAGCGCAAGGA
Long Flanking Sequence:
AAATGACAATTATTTCTCTGCCAACTATTGGAAAATTTTTAACAAATAATATTTTGAAGAATGCTGCAAATCAGCAGCCATTGACATCGATAGGATTTTTTCCTCCACTGTAAAAAATGCTGTTCTACAAAATTCCCTCATGTTGTCCCCTCCCCCCCCCAAAAAAAAAAACAAACAAACAAGATAACTGAATGGCTTTTACAAATTTAAGTGGATTGAACATAAAACAGTTTTGTCTTTCCAAAAAATGTGAAAACAAAAGAACTTTGTTGTTTCAACTCATTTTAAATAAGTACTTTGAACAAGCAACAAAAGTCATTTCTTAAGTGTACTGTGGAAGTCAATGGCTAGTTATCAACATTCTTTAAAATATATTATGTTTGACATAAGAAAACCACTTTAGATGGTGAGTAAATGTTCATTTTTGGGTGAACTATCCCTTAAATACAGACACCAATGCATGAATGTTAATAACTGTTTGTATTTTTTAACAGGATACT[T/A]GAACTTGTATCATGAACATACTCAGTTTGAGTACAGTTACAGCGCAAGGAAAGTCGTTCGCATCATGAGGGCAAACTCCATACTCAATTGCTGAGCACTTACAACTTTTTTTCAATTCTGTGTAAATTAACATTCATTTTTAGGTTGCACTTTATTTTACAGTACTTGTACTTAATGTGTAAGTAGAAGGAACTGGGTTATAAAAGGTCCCTACAGGTCAAGGGTTGGTATAGAGATTGACCAAGTATTACCCAATTTATGTAAAAACTAAGTTCATATGAAACATTCATTCATTTTCCTTCGGCTTAGTCTCTTTATTTATCAGGGGTTGCCACAGAGGAATGAACCACAGACTATTGCGGCATATGTTTTACACAGCGGATGCCTTTCCAGCTGCAACCCAGTACTGGGAGACAACCATACACTCACATTCACACACTACATACAATTTAACCAACCCAATTCACCTCTACCGCATGTCTTTAGACTGTGAGGGAAAC
Associated Phenotype:
Not determined