Busch Lab

ZMP

zic1

Ensembl ID:
ENSDARG00000015567
ZFIN ID:
ZDB-GENE-000208-4
Description:
zinc finger protein ZIC 1 [Source:RefSeq peptide;Acc:NP_571008]
Human Orthologue:
ZIC1
Human Description:
Zic family member 1 (odd-paired homolog, Drosophila) [Source:HGNC Symbol;Acc:12872]
Mouse Orthologue:
Zic1
Mouse Description:
zinc finger protein of the cerebellum 1 Gene [Source:MGI Symbol;Acc:MGI:106683]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa12532 Nonsense Available for shipment Available now
sa5987 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa12532
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000016546 None None 360 1 4
ENSDART00000127597 Nonsense 35 442 1 3
Genomic Location (Zv9):
Chromosome 24 (position 5053116)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 4941609
GRCz11 24 4973396
KASP Assay ID:
2261-8373.1 (used for ordering genotyping assays)
KASP Sequence:
CTCCACCAGACATCACTCAACAGGCGAAGTTACAGACAGAGAAGTGGCTT[T/A]GGGTATCAAWCCGTTCGCCGACGGTATGGGCGCTTTTAAAATCAACCACA
Long Flanking Sequence:
TGGTGAGTGAATGTTAGTAGGGGGAGAGCGCCCTCTCCAATGATGGTCCAAGCACGGGGTCACGTGCTGCCCCCCTCCTTCCCCATTCATCAGGGGTGGACTGTGTTGTCTTTTCAATTCATTTATCTGCAGGAATGATTGCGACTATCAGTCTGAAGCTCACCGCCTGACTGAGGAGGTGAAAGTTGCGCCACAGGAAGATAAACCGCAAAAGACAATATTGCACATGATTTGCGTGTGCATCGGATGAGCAGGAGAGGGAAATTCCTCTCCACTAAAAGTAAATAGGAATAGGGGATCGGAGTTTGCCTTGCACAGACTTAAGTCAGAGAAATAGTAAGCAGAGACAGTTGTAAGAGATTCTTCCTCTCTCAGTCTCCTCCGCTGCAGACTGAAGATGCTCTTGGACGCAGGACCACAGTATCCCACCATTGGAGTGACTACTTTCGGCTCCACCAGACATCACTCAACAGGCGAAGTTACAGACAGAGAAGTGGCTT[T/A]GGGTATCAATCCGTTCGCCGACGGTATGGGCGCTTTTAAAATCAACCACAGCTCCCACGATCTCGGCTCTGGGCAAACAGCCTTTTCCTCGCAGGCACCCGGTTACGCCGCCGCTGCCCTGGGACACCATCATCACCCCACTCATGTCAGCTCGTACTCCACCGCCGCCTTCAACTCCACTCGGGACTTTCTTTTTCGCAATCGGGGCTTCGGGGACGCCACGAGCGCGCAACACAGTCTATTCGCCTCCGCCGCTGGAAGTTTCGCCGGGCCACATGGACACTCTGACGCCGCTGGGCACCTGCTCTTCCCGGGACTGCACGAGCAAGCGGCCACGCACGCGTCCTCCAACGTGGTAAACAGTCAGATGCGCCTGGGCTTTTCAGGGGACATGTACGGCAGGGCCGAGCAATACGGTCATGTCGCGAGTCCCAGGTCCGAGCACTACGCTTCGACTCAGTTGCACGGCTATGGCCCCATGAACATGAATATGGCTGCCC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa5987
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000016546 Essential Splice Site 279 360 1 4
ENSDART00000127597 Essential Splice Site 322 442 1 3
Genomic Location (Zv9):
Chromosome 24 (position 5052252)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 4940745
GRCz11 24 4972532
KASP Assay ID:
554-3870.1 (used for ordering genotyping assays)
KASP Sequence:
AGWATTTGCCCGATCGGAAAATCTGAAAATCCACAAAAGAACACACACAG[G/A]TAAGAAAATCKTTATTTTCATCTCTAAATACACGTTCATTCCTAGTTTTT
Long Flanking Sequence:
TCAGATGCGCCTGGGCTTTTCAGGGGACATGTACGGCAGGGCCGAGCAATACGGTCATGTCGCGAGTCCCAGGTCCGAGCACTACGCTTCGACTCAGTTGCACGGCTATGGCCCCATGAACATGAATATGGCTGCCCACCACGGGGCAGGGGCCTTCTTTCGGTACATGAGACAGCCCATAAAGCAAGAGCTCATCTGCAAATGGATCGAACCAGAGCAGCTGACGAATCCGAAAAAGTCCTGCAACAAAACTTTCAGCACTATGCACGAGCTTGTGACCCATCTGACTGTAGAGCACGTTGGGGGACCAGAGCAGTCGAATCACATTTGCTTTTGGGAAGAGTGCGGCCGGGAAGGGAAACCGTTTAAAGCAAAATATAAACTTGTGAATCATATCAGAGTTCACACGGGAGAGAAACCGTTTCCGTGTCCATTCCCCGGCTGTGGAAAAGTATTTGCCCGATCGGAAAATCTGAAAATCCACAAAAGAACACACACAG[G/A]TAAGAAAATCGTTATTTTCATCTCTAAATACACGTTCATTCCTAGTTTTTAATGAAGAGGTATATTTTTGTATTTATGTGTTGCAATTATAGGACCGTAAATAAGCATTAATTCCCAAGCAAATATTGCTGATAATAATATTTATTTCTTTGTCCTGTCAATAATTTGCCAACCGAGCATAATTCAGTGACGCAAATTAGTAACTGTATTTGTTATTGGTGTAAAATATCTAATAATTTAAACGTTTAGCTGAATTTTATCTTTGGAAAATAATGTGTATAATTATGGCTAATTTTAAAAAGAGTTTTAAATAATTATTCGTGAGTGGAATATATATTTATATAGAAACTTTATATTTATTAGCACACTCATTGTTAATTCATGCACCTCCGACAGTGCTACCACAGAAAATAAAAAATATATATAATAATTCACTTGCTAGCTTTTTAAAATGTGTATTTTGAGCAATATTTGCTTTGTTTTTGTTAGGTGAAAAACCT
Associated Phenotype:
Not determined