ZMP
tspan18b
Ensembl ID:
ZFIN ID:
Description:
tetraspanin 18b [Source:RefSeq peptide;Acc:NP_001002439]
Human Orthologue:
TSPAN18
Human Description:
tetraspanin 18 [Source:HGNC Symbol;Acc:20660]
Mouse Orthologue:
Tspan18
Mouse Description:
tetraspanin 18 Gene [Source:MGI Symbol;Acc:MGI:1917186]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa36669 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa36669
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000020137 | Essential Splice Site | 145 | 246 | 7 | 9 |
| ENSDART00000141835 | Essential Splice Site | 157 | 258 | 7 | 9 |
Genomic Location (Zv9):
Chromosome 18 (position 27758593)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 27831445 |
| GRCz11 | 18 | 27809685 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGAAATCTGTCTCATTTAAAGTCAAATTTGTCCTTCTTTGCGTTTCTCT[A/G]GTTTGACTGCTGTGGAGTGAACAGTCCAGAAGACTTTGAGGAAAGCATCT
Long Flanking Sequence:
AAGAAGCAAGCTTCCCCAAAACATATAAAAGCAATGTAAAATCAAGGTAAAGCTACATGGATATGGAGCACGTTTTTACATTTGTTTTAAAAACACTATTGGTTGCATTTAAGTAAGGGTTTAGATAAGTTGTTCACTAAAGGATCTGTACATCAAGCCCTGCCTTTTTTACAAAAATGAACACAGTGCCCTCTAGTGGATTTGTTTCTGAAATGTGCAACAAAACATACCCGGAGCAATGTATTTTTGTTTTGCATAGACGTAAGTCGAAGAGTAGTAGTAACAAGTAGTTTTAGTAGACATTCTTTAAAGAGACCATGAAGATCTGAATGTTCTGAAGCTAAATAGATGTCTTAGGTTTTGAACTTCACAAGTTTGAGCAAAAATAATGCCATTACTTTTTTTTCGGAGTAAACTAAGCTTTAAGCACAGCTTCAACATTCAGCCAAGCTGAAATCTGTCTCATTTAAAGTCAAATTTGTCCTTCTTTGCGTTTCTCT[A/G]GTTTGACTGCTGTGGAGTGAACAGTCCAGAAGACTTTGAGGAAAGCATCTTCAGGATCATAAACCCTAGTGAAATGGTGCCGGAGGCCTGCTGCCGGAGGAATAATCATGTTGGAGAATCAGGCTTCAGTAACCGGGAGGAATGCCTGTCGGGCAGCATGCTGTACCGGAACAACAAGGTAGAGTACGTCACATCCCCTCAGCCTGCTCCAAAGCTAGCTCAGATTCAAGCAGAGCAGAAAAACAGGAAGAGGTAACTTCAGTAGTGCTGACTAGTGCTTTTCCATGCTCTCAGTGTCTGGGGAATGTGAGTGTTTCTGCGAAAGCGAGCGATGCTTGTTCATTTTATGTAAGGGCTCACATTGGTTTTCAGCCCTGTAGTGGACGACTGAACTGAAAAAAACATTTCTTGTTATTTAGACTCATAACATGTCATTAAAAATCTAGATTTGTTCATTTCGTCACTCTCATTTAATTCTAAGCCCATATGAGTAGCATCTA
Associated Phenotype:
Not determined