Busch Lab

ZMP

glt25d2

Ensembl ID:
ENSDARG00000014670
ZFIN ID:
ZDB-GENE-070222-1
Description:
procollagen galactosyltransferase 2 [Source:RefSeq peptide;Acc:NP_001123548]
Human Orthologue:
GLT25D2
Human Description:
glycosyltransferase 25 domain containing 2 [Source:HGNC Symbol;Acc:16790]
Mouse Orthologue:
Glt25d2
Mouse Description:
glycosyltransferase 25 domain containing 2 Gene [Source:MGI Symbol;Acc:MGI:2138232]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa34369 Nonsense Mutation detected in F1 DNA Not yet available
sa38683 Nonsense Mutation detected in F1 DNA Not yet available
sa21257 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa34369
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000014183 Nonsense 385 613 9 12
Genomic Location (Zv9):
Chromosome 8 (position 19893746)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 19338384
GRCz11 8 19368801
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGAACACATCTCAGCTTCAAGCTCTTGGTATAGAAATGATGCCAGGGTA[T/G]AAAGATCCGTATTCTGGTCGAGTTTTGACACGTGGAGAGATCGGCTGTTT
Long Flanking Sequence:
ATTTCAAATGTCTTTTCTTGCAGTCGATCATAACATAAAACCCTCCGAGTTCCTCTTCACTCCAAGCAAACCTCAGGACAAGATGAGCTTTGATGAGGTGAGAGAGCAGAATCTCTGGAATGTCTTGCATGACTGGAGACTCATGATAGCAGAAACTCAAAGCTACTTCAAAGTGACATTTCGTCTCGATTTGTTCCTCCAATGCTCTTGTTCTTTTATTTCACCTCAGATCTTCTTGATTAATCTGAAGCGGAGGTTCGACCGAAGGGAACGGATGTTGAACACTATGGCAGTTCTGGGTCTTGAGGCGACGCTGGTTGATGCCGTCGATGGGAAGTAGGTCATCAAATGGACAATTTGTGGCATCCTGTTTATTTTGGGGTTTTTTGAAATGTGTCAGAACTGGTCATGTGAAAGCGCTTCAGACTTTGTTTGTTTACTCTCAGGACTTTGAACACATCTCAGCTTCAAGCTCTTGGTATAGAAATGATGCCAGGGTA[T/G]AAAGATCCGTATTCTGGTCGAGTTTTGACACGTGGAGAGATCGGCTGTTTCCTCAGTCACCACTTCACCTGGAAACAGGTACACACACACTCATGAATAGATATGCTGCACTTTACATTAAAAATGGCTGACTCTAAATAACTCTAAATATTTTAGAATCTCTGTGTAAAACTATTTAACACATCTAATGTATCTAATTATCACAACACAGTTTTAAATGTTTACAGATAATGGTTTAAAAAGTGGACTGAATAGTTTAAATTATCTTTACCTATTGGGTTTTACAGTGTAGCATCTGTTTTATTAAAGTTTTAGTAGTTTTACTAAAGATATAATTTATTAATTTAATTTAAATGTATCAAATGGAACTGACATTTCAAAACTCAAATTATGCTCAACATATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTAATTATATATTATTTTATA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa38683
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000014183 Nonsense 401 613 9 12
Genomic Location (Zv9):
Chromosome 8 (position 19893698)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 19338336
GRCz11 8 19368753
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATAAAGATCCGTATTCTGGTCGAGTTTTGACACGTGGAGAGATCGGCTG[T/A]TTCCTCAGTCACCACTTCACCTGGAAACAGGTACACACACACTCATGAAT
Long Flanking Sequence:
GTTCCTCTTCACTCCAAGCAAACCTCAGGACAAGATGAGCTTTGATGAGGTGAGAGAGCAGAATCTCTGGAATGTCTTGCATGACTGGAGACTCATGATAGCAGAAACTCAAAGCTACTTCAAAGTGACATTTCGTCTCGATTTGTTCCTCCAATGCTCTTGTTCTTTTATTTCACCTCAGATCTTCTTGATTAATCTGAAGCGGAGGTTCGACCGAAGGGAACGGATGTTGAACACTATGGCAGTTCTGGGTCTTGAGGCGACGCTGGTTGATGCCGTCGATGGGAAGTAGGTCATCAAATGGACAATTTGTGGCATCCTGTTTATTTTGGGGTTTTTTGAAATGTGTCAGAACTGGTCATGTGAAAGCGCTTCAGACTTTGTTTGTTTACTCTCAGGACTTTGAACACATCTCAGCTTCAAGCTCTTGGTATAGAAATGATGCCAGGGTATAAAGATCCGTATTCTGGTCGAGTTTTGACACGTGGAGAGATCGGCTG[T/A]TTCCTCAGTCACCACTTCACCTGGAAACAGGTACACACACACTCATGAATAGATATGCTGCACTTTACATTAAAAATGGCTGACTCTAAATAACTCTAAATATTTTAGAATCTCTGTGTAAAACTATTTAACACATCTAATGTATCTAATTATCACAACACAGTTTTAAATGTTTACAGATAATGGTTTAAAAAGTGGACTGAATAGTTTAAATTATCTTTACCTATTGGGTTTTACAGTGTAGCATCTGTTTTATTAAAGTTTTAGTAGTTTTACTAAAGATATAATTTATTAATTTAATTTAAATGTATCAAATGGAACTGACATTTCAAAACTCAAATTATGCTCAACATATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTAATTATATATTATTTTATATTAGTAAATTGGTTTCTTCAAATGGTTTTGAGTTTACTTTGGTTTTGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21257
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000014183 Essential Splice Site 411 613 9 12
Genomic Location (Zv9):
Chromosome 8 (position 19893666)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 19338304
GRCz11 8 19368721
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACGTGGAGAGATCGGCTGTTTCCTCAGTCACCACTTCACCTGGAAACAGG[T/C]ACACACACACTCATGAATAGATATGCTGCACTTTACATTAAAAATGGCTG
Long Flanking Sequence:
AGATGAGCTTTGATGAGGTGAGAGAGCAGAATCTCTGGAATGTCTTGCATGACTGGAGACTCATGATAGCAGAAACTCAAAGCTACTTCAAAGTGACATTTCGTCTCGATTTGTTCCTCCAATGCTCTTGTTCTTTTATTTCACCTCAGATCTTCTTGATTAATCTGAAGCGGAGGTTCGACCGAAGGGAACGGATGTTGAACACTATGGCAGTTCTGGGTCTTGAGGCGACGCTGGTTGATGCCGTCGATGGGAAGTAGGTCATCAAATGGACAATTTGTGGCATCCTGTTTATTTTGGGGTTTTTTGAAATGTGTCAGAACTGGTCATGTGAAAGCGCTTCAGACTTTGTTTGTTTACTCTCAGGACTTTGAACACATCTCAGCTTCAAGCTCTTGGTATAGAAATGATGCCAGGGTATAAAGATCCGTATTCTGGTCGAGTTTTGACACGTGGAGAGATCGGCTGTTTCCTCAGTCACCACTTCACCTGGAAACAGG[T/C]ACACACACACTCATGAATAGATATGCTGCACTTTACATTAAAAATGGCTGACTCTAAATAACTCTAAATATTTTAGAATCTCTGTGTAAAACTATTTAACACATCTAATGTATCTAATTATCACAACACAGTTTTAAATGTTTACAGATAATGGTTTAAAAAGTGGACTGAATAGTTTAAATTATCTTTACCTATTGGGTTTTACAGTGTAGCATCTGTTTTATTAAAGTTTTAGTAGTTTTACTAAAGATATAATTTATTAATTTAATTTAAATGTATCAAATGGAACTGACATTTCAAAACTCAAATTATGCTCAACATATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTAATTATATATTATTTTATATTAGTAAATTGGTTTCTTCAAATGGTTTTGAGTTTACTTTGGTTTTGAAGTGTACTGACCACATTCTAATACATTTTATC
Associated Phenotype:
Not determined