ZMP
spaw
Ensembl ID:
ZFIN ID:
Description:
southpaw [Source:RefSeq peptide;Acc:NP_851298]
Human Orthologue:
NODAL
Human Description:
nodal homolog (mouse) [Source:HGNC Symbol;Acc:7865]
Mouse Orthologue:
Nodal
Mouse Description:
nodal Gene [Source:MGI Symbol;Acc:MGI:97359]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa9063 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa177 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa9063
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000003620 | Nonsense | 153 | 404 | 2 | 3 |
| ENSDART00000139933 | Nonsense | 160 | 411 | 2 | 3 |
Genomic Location (Zv9):
Chromosome 5 (position 71787153)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 68111771 |
| GRCz11 | 5 | 68882438 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCCATCAGCATAAACAGCRYTGTGCATCTGACTCCGTGTTTTGTCGCAAC[A/T]AAAAACTGTTTCTGGGCAGCGTTAAATCAGTAGACGTCTCYCAAKCATCA
Long Flanking Sequence:
GTTGGGAAGGTGCTATAATAACCTATAGTTGGTTTATACGTGGGGTACTTTTAACCCAACTTTTAACAGAGTAGGAGTAGTAAACGGTCAAATTACTTGTTTTCCAAACAATTGTGTTTATGACTATACATAAAAAGCTAAATAATATAATGAAAAAAGTCAGGTTGCAACATCAAGAAGCACAACGAGCTGTTTGTAACGTCTAAAAATCAGTGAAAGAGCGAAAGTCTTGACCCAAAATGATTCCAAAGGCTGCGGCCTCTCGTACATCAGGAATAAGGTCAATACTAGCATGTTTTATTTATTTTCCAGACTGTCATCAAACTGAAGAGCGATGGACCGTCTCCTTTGACATGTCTTCCCTGTCAGCGAGTGACAACATCCAGCTCTCGGAGCTTCGCATTCGGCTGCCGGCGTTTTCTGCATCCAGACGCGTGACTGTAGACATCTTCCATCAGCATAAACAGCATTGTGCATCTGACTCCGTGTTTTGTCGCAAC[A/T]AAAAACTGTTTCTGGGCAGCGTTAAATCAGTAGACGTCTCCCAATCATCATCATCCTGGAGAGTTTTTAACATTACAGAACTCCTACAGCAATGGCTGATTCAGGGAATGGATACACCAGACCGGGTCACGGCACCAGATTATGACCAGGGCAGTGGAAGTGGAAGCGGAGACGACTTTATTGAATCTCTCACAAGCAGCTGGCCAAGAAAAATCCAGCATCCCACAGCAGAACGAGTCATGATTGTAGTTTTCTACAAAGAAACTGTGACCCACAGCGCTTCCAGCTTGATGAATACAGTGGCGCAGTCCAAATACGTCACGCTGAACCGACCAGCAGATGGAACTCAGGGTCGGAGACACAAACGAAACCGTGTGGAAAGGATGCGCATGACTGATGACAGAAATGTGACAGGAAAGCCAACACCTTCAGAGGAACAGCAAGCTTCACTTTGCCGGCGGGTTGATATGTGGGTGGATTTTGATCAGATTGGGTGGGAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa177
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000003620 | Nonsense | 275 | 404 | 2 | 3 |
| ENSDART00000139933 | Nonsense | 282 | 411 | 2 | 3 |
Genomic Location (Zv9):
Chromosome 5 (position 71787519)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 68112137 |
| GRCz11 | 5 | 68882804 |
KASP Assay ID:
554-0047.1 (used for ordering genotyping assays)
KASP Sequence:
ACGTCACKCTGAACCGACCAGCAGATGGAACTCAGGGTCGGAGACACAAA[C/T]GAAACCGTGTGGAAAGGATGCGCATGACTGATGACAGAAATGTGACAGGA
Long Flanking Sequence:
CAGCGAGTGACAACATCCAGCTCTCGGAGCTTCGCATTCGGCTGCCGGCGTTTTCTGCATCCAGACGCGTGACTGTAGACATCTTCCATCAGCATAAACAGCATTGTGCATCTGACTCCGTGTTTTGTCGCAACAAAAAACTGTTTCTGGGCAGCGTTAAATCAGTAGACGTCTCCCAATCATCATCATCCTGGAGAGTTTTTAACATTACAGAACTCCTACAGCAATGGCTGATTCAGGGAATGGATACACCAGACCGGGTCACGGCACCAGATTATGACCAGGGCAGTGGAAGTGGAAGCGGAGACGACTTTATTGAATCTCTCACAAGCAGCTGGCCAAGAAAAATCCAGCATCCCACAGCAGAACGAGTCATGATTGTAGTTTTCTACAAAGAAACTGTGACCCACAGCGCTTCCAGCTTGATGAATACAGTGGCGCAGTCCAAATACGTCACGCTGAACCGACCAGCAGATGGAACTCAGGGTCGGAGACACAAA[C/T]GAAACCGTGTGGAAAGGATGCGCATGACTGATGACAGAAATGTGACAGGAAAGCCAACACCTTCAGAGGAACAGCAAGCTTCACTTTGCCGGCGGGTTGATATGTGGGTGGATTTTGATCAGATTGGGTGGGATGAGTGGATCGTGCATCCCAAGCGCTATAATGCATACAGATGCGAAGGGGAATGTCCGAGTCCTCTGGATGAGACTTACAACCCAACAAACCACGCTTACATGCAGGTGAGATACATACTTTAATGTTTGAGATCATATTTATTATTTATAATATGTCAGCACTCAAAAAAAAAAGTGCCTTTTCACATTTCCGGGTTTCTCAGTAGTGGAAGTCGTCATAGTTGGTTAACTTACAGTGCAGTGCATGGGAGAGTACAACAAATCAGTTTTACAATCCTATTTGCTGAAATAATAATGGAAAAATTCCCCGATGGTGTTATCAAGACTTTCATAACAGGAAAACAATAGTGTGAGGCTGATAACGGC
Associated Phenotype:
This allele has been associated with this phenotype by genetic linkage analysis and may not be causal.
See FAQs for more info.
See FAQs for more info.
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
determination of left/right symmetry GO:0007368 |
disrupted PATO:0001507 |
abnormal PATO:0000460 |