Busch Lab

ZMP

brd1

Ensembl ID:
ENSDARG00000013596
ZFIN ID:
ZDB-GENE-041008-168
Description:
Novel protein similar to vertebrate bromodomain containing 1 (BRD1) [Source:UniProtKB/TrEMBL;Acc:Q5R
Human Orthologue:
BRD1
Human Description:
bromodomain containing 1 [Source:HGNC Symbol;Acc:1102]
Mouse Orthologue:
Brd1
Mouse Description:
bromodomain containing 1 Gene [Source:MGI Symbol;Acc:MGI:1924161]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa33480 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa33480
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000013083 Nonsense 304 1142 1 12
ENSDART00000145083 Nonsense 304 1142 2 13
Genomic Location (Zv9):
Chromosome 4 (position 26429042)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 27143363
GRCz11 4 27132651
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACACGGTTTTTATAGAGCCTATTGATGGTGTCTCAAACATTCCCCCTGCT[C/T]GATGGAAACTTACTTGCTACCTCTGTAAAGAAAAAGGTGTTGGAGCTTGT
Long Flanking Sequence:
AATATGATATGGATGAAGAGGACTTTGCCTGGCTTGACCTGGTCAATGAGAAAAGGAAGGATGAAGGTCTCAATCTGGTTTCTTTCGATGACTTTGAGTTTCTTCTTGACCGTTTTGAAAAAGAGTCATTCTTAGAGAGTCAAGGCCAACATACCCTACAGTCAATAGATGATGAAGATGCTGTTTGCTGCATATGCATGGATGGAGACTGCATGGACAGCAATGTCATCCTCTTCTGTGACATGTGCAACCTAGCTGTTCATCAGGATTGTTACGGTGTTCCATATATTCCAGAGGGTCAGTGGCTTTGCAGACATTGTCTACATTCCCCAACACAACCTGCAAATTGCATCCTCTGCCCTAACAAGGGAGGAGCAGTAAAACAAACTGAAGACGACAGATGGGGTCATGTGGTATGTGCTTTATGGGTACCCGAGGTTGGGTTCTCCAACACGGTTTTTATAGAGCCTATTGATGGTGTCTCAAACATTCCCCCTGCT[C/T]GATGGAAACTTACTTGCTACCTCTGTAAAGAAAAAGGTGTTGGAGCTTGTATCCAATGCCACAAAGCTAACTGCTACACTGCATTCCATGTCAGCTGTGCACAGAAGTCTGGTCTTTTTATGAAGATGGAGCCTATTAAGGTTTTGACTGACTCGGGTATACCCACATTCTCAGTGAAGAAGACAGCCTATTGTGGGGCCCACACTCCAAACGGCTCAGTTAAAAGACCTCTTGCAATATATAAAGACAATGAGACAAATTATGGGCTTTGCCAGTTGGTAGATAGAAAGAGCAGCAGAATAGGATTTAACAAGCAGAAGAGACTTAAAAAAAATGAAGAGGCTATTGTAACCACAATTCCTCCCTTGTCTGTACCCAGCTTTTCATCGGAAAGGTATGTTTGACAATGTAGACTTTTGCAAAAATTGGTGAGGTGTCTGAATTACACATGCTAAGATGCACAGATTCCACACTGTCATTGTTCTACAGATTGTCCCCCA
Associated Phenotype:
Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:
sa3483
Status:
Allele not cryopreserved
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000013083 Nonsense 500 1142 3 12
ENSDART00000145083 Nonsense 500 1142 4 13
Genomic Location (Zv9):
Chromosome 4 (position 26429812)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 27144133
GRCz11 4 27133421
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TATTGTAAAAACAGAAACAGACAGAGGAGGAGACWCAAGCACTGAAAGAA[C/T]AGTTGAAGGAGTGGCATCAGTTAAGGCATGATCTTGAGCGTGCACGAATA
Long Flanking Sequence:
TGCCAGTTGGTAGATAGAAAGAGCAGCAGAATAGGATTTAACAAGCAGAAGAGACTTAAAAAAAATGAAGAGGCTATTGTAACCACAATTCCTCCCTTGTCTGTACCCAGCTTTTCATCGGAAAGGTATGTTTGACAATGTAGACTTTTGCAAAAATTGGTGAGGTGTCTGAATTACACATGCTAAGATGCACAGATTCCACACTGTCATTGTTCTACAGATTGTCCCCCATTCTCAACCAAGTTTCTTTGCAAAAGAAGACAGCATTTGGTGAACTTGTCTTGAGTTACTGGACCCTTAAACGACAATCTAGAAATGGAGTGCCACTGAACAGACGCCTCCAAACTAGACTACATCCCCCCAAAAACAGTCAGCGCGTAAGTATCTTGGTCTGCAGTGTCTTTAAGCAACTTAATATTGTCATGTAAATGTCTTACCTGAATGTCTATATATTGTAAAAACAGAAACAGACAGAGGAGGAGACTCAAGCACTGAAAGAA[C/T]AGTTGAAGGAGTGGCATCAGTTAAGGCATGATCTTGAGCGTGCACGAATACTGCTGGAGCTGATCAGGAAAAGAGAGAAACTCAAGAGAGAGGAGGTATGAGAACATCATACTATGTTAAAGTCAAGATGAGCATAATCTTTATTGTTTGAATGTGTGTGATCTTAAAGCATGACGTGTGTGATTCTGTTGCAGGTATTGCTTCAGCAGACATTAATGGAGTTCCAACTCACTCCTTTCACAGTCATTTTGAGGGCTGTCCTGGATCAGTTACAAGAGAAGGACCAGGCACACATTTTTGCAGAACCTGTCAACATTAAAGAGGTTGTTTTACAAGTTTCCTTAATTTTAACATAAGTCAAAAGACTTTTCAGTATGCATACAGTGTCTATGTCCACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTATATTAGGGCTGTAACGATACACCAAACC
Associated Phenotype:
Not determined