ZMP
brd1
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate bromodomain containing 1 (BRD1) [Source:UniProtKB/TrEMBL;Acc:Q5R
Human Orthologue:
BRD1
Human Description:
bromodomain containing 1 [Source:HGNC Symbol;Acc:1102]
Mouse Orthologue:
Brd1
Mouse Description:
bromodomain containing 1 Gene [Source:MGI Symbol;Acc:MGI:1924161]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa33480 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa33480
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000013083 | Nonsense | 304 | 1142 | 1 | 12 |
| ENSDART00000145083 | Nonsense | 304 | 1142 | 2 | 13 |
Genomic Location (Zv9):
Chromosome 4 (position 26429042)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 27143363 |
| GRCz11 | 4 | 27132651 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACACGGTTTTTATAGAGCCTATTGATGGTGTCTCAAACATTCCCCCTGCT[C/T]GATGGAAACTTACTTGCTACCTCTGTAAAGAAAAAGGTGTTGGAGCTTGT
Long Flanking Sequence:
AATATGATATGGATGAAGAGGACTTTGCCTGGCTTGACCTGGTCAATGAGAAAAGGAAGGATGAAGGTCTCAATCTGGTTTCTTTCGATGACTTTGAGTTTCTTCTTGACCGTTTTGAAAAAGAGTCATTCTTAGAGAGTCAAGGCCAACATACCCTACAGTCAATAGATGATGAAGATGCTGTTTGCTGCATATGCATGGATGGAGACTGCATGGACAGCAATGTCATCCTCTTCTGTGACATGTGCAACCTAGCTGTTCATCAGGATTGTTACGGTGTTCCATATATTCCAGAGGGTCAGTGGCTTTGCAGACATTGTCTACATTCCCCAACACAACCTGCAAATTGCATCCTCTGCCCTAACAAGGGAGGAGCAGTAAAACAAACTGAAGACGACAGATGGGGTCATGTGGTATGTGCTTTATGGGTACCCGAGGTTGGGTTCTCCAACACGGTTTTTATAGAGCCTATTGATGGTGTCTCAAACATTCCCCCTGCT[C/T]GATGGAAACTTACTTGCTACCTCTGTAAAGAAAAAGGTGTTGGAGCTTGTATCCAATGCCACAAAGCTAACTGCTACACTGCATTCCATGTCAGCTGTGCACAGAAGTCTGGTCTTTTTATGAAGATGGAGCCTATTAAGGTTTTGACTGACTCGGGTATACCCACATTCTCAGTGAAGAAGACAGCCTATTGTGGGGCCCACACTCCAAACGGCTCAGTTAAAAGACCTCTTGCAATATATAAAGACAATGAGACAAATTATGGGCTTTGCCAGTTGGTAGATAGAAAGAGCAGCAGAATAGGATTTAACAAGCAGAAGAGACTTAAAAAAAATGAAGAGGCTATTGTAACCACAATTCCTCCCTTGTCTGTACCCAGCTTTTCATCGGAAAGGTATGTTTGACAATGTAGACTTTTGCAAAAATTGGTGAGGTGTCTGAATTACACATGCTAAGATGCACAGATTCCACACTGTCATTGTTCTACAGATTGTCCCCCA
Associated Phenotype:
Not determined