ZMP
abca2
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate ATP-binding cassette sub-family A ABC1 member 2 (ABCA2) [Source:
Human Orthologue:
ABCA2
Human Description:
ATP-binding cassette, sub-family A (ABC1), member 2 [Source:HGNC Symbol;Acc:32]
Mouse Orthologue:
Abca2
Mouse Description:
ATP-binding cassette, sub-family A (ABC1), member 2 Gene [Source:MGI Symbol;Acc:MGI:99606]
Alleles
There are 10 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa40425 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa9569 | Nonsense | Available for shipment | Available now |
sa33597 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa33596 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa40424 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa45201 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa18415 | Nonsense | Available for shipment | Available now |
sa40423 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa40425
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000090743 | Nonsense | 141 | 2503 | 4 | 49 |
ENSDART00000141554 | Nonsense | 119 | 2418 | 3 | 47 |
The following transcripts of ENSDARG00000013500 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 5 (position 26832807)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 24660072 |
GRCz11 | 5 | 25163872 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGCACCTCGAAAGTCTGAGCTCAGCACAAGGCCCTCTAGAGAGCCACTA[C/A]AACACCAGCCACGGTCAGAAAATGCACAGACATACTAAACATGCAGCAGA
Long Flanking Sequence:
GCGGAGTAATACACAAGGGTGAAGAGGCAGTACTAGTGCTGTTATTTGCAGAATATCCCACGACTATCAGCCAATTATATTAAAAAACCAGACAGAACTGGTGTATAAATATGTATGATGTAAATATAAACATGTAACAGCGATGCTGCAAATATTATAACACTGTAAAACTTTTTTTAATCTCTCTAATAATCTATGGTCTATATCCTATACTTGTTTGTTGTTGCTGTTTTTCTATTGAGTTACCTCACGTTTGGGATTTGATCTTCTCTTCTCATTCGTGTGTTCTCTTTGCTCCTCTTATGATTAAAGTTCACTTCTCTGACCTCAATGTTTCTGTTGTGTCTCAGTGTGACTCAATTGCTGGAAAGGATAAGTGAAGTTGTGGAGCAGAATCACTTGTTTACATCAGACAGGCCCAGTCTGGGAGAGGAGCTGGAGTCTCTGCAGCAGCACCTCGAAAGTCTGAGCTCAGCACAAGGCCCTCTAGAGAGCCACTA[C/A]AACACCAGCCACGGTCAGAAAATGCACAGACATACTAAACATGCAGCAGACTTCATTATCTTGCATGTCTTTATGCAAATTAGAAATTAGAAGCAAATCAGTACGGTAGTAACACAGTGCTGCTGTTACTGTCTGATTTGGTGACAAGTTAATTCAGACACTGATTGCATGATATTTTATTGTGGTAGAATTATGACTAGCTTAACAAAAGTTATAAAATAACTACATATTACCAACCATTAAGATGCATATACAGTTGAAGTCAGAATTATTAACCCCCCTTTGAATTTTTGTTCTTTTTTAAATATTTTCTAAATGATGTTTAACAGAGCAAGGACATTTTCACAGTATGTCTGATAATATATTTTCTTCTATAGAAAGTCTTATTTGTTTTATTTCGGCTAGAACAAAAGCAGTTATTAATTTTTTAAACACCATTTTAAGGACAAAATTATTAGCCCCTTAAGCAATTTTTTTTCGACTGTCTACACTGTAAACCC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa9569
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000090743 | Nonsense | 312 | 2503 | 8 | 49 |
ENSDART00000141554 | Nonsense | 231 | 2418 | 6 | 47 |
The following transcripts of ENSDARG00000013500 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 5 (position 26816663)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 24643928 |
GRCz11 | 5 | 25147728 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCTGTGGGGAAGGAGGGAACAGTGAGATTGGCAAAATCCTATTGGTCCCT[G/T]AGAAACAACAGGYGGTTTTACAGGCYTACYGCACGACTGTTTGTGGTTTA
Long Flanking Sequence:
CTCAAAAAACTAAACCTGACCCTATCCGAGTCCATGCACCTTGTGTCCGAGCTGACTCAGTCTTACACATTAACTGTAATTATGAGCCCGTGCCAGATTTTTGACATGACATTTCAGTCTATCCCTATTTATGCTCAGAAGCAACTACTTGGAGGCTGGCACAGTGTAGACGGGGGTCTGATTCAGAAGGCACTGAGAGATCCCACAAAAGCTGCTCACCGTCAAGCTCTTCTCAAAGTCTTCTCTCAGGCGTTGGGCATCGCTGGCGGTGTAGGAGGTCAAAAATTCGATCCTCAAGCACTGCGTGAGATGGAGGTCAGTCTGACACTACACTTTAACAGTTCATTCCACTCTAATCATATCCTTGAGTTCAGTGTCCATGGCTGACAAATGTACCTCTTATATTTTTTCAGGGAGTTCTGTTGACTGGTGCAGTGCTTGAAAGCCTTACCTGTGGGGAAGGAGGGAACAGTGAGATTGGCAAAATCCTATTGGTCCCT[G/T]AGAAACAACAGGCGGTTTTACAGGCTTACCGCACGACTGTTTGTGGTTTAGGGGCGGGGCAGAGGGCGGAGCTTTTCAGACAGTTGAGTGAAGAACTGAGAGATCAGATTGACACACAGAGAGTCTTTGATCAGGTACAGTATGTGCAAGAACAACACTTTTTTTTAAGCAAAATACTGTAATTTTGTTGAATTTGGCTAAATGTTCTTGTTTGTTAATTGTTTATTTTACCAAATCAGTCAAAATCAAATCAAATCCCTTTTATTGTCACATCATCAGCAGCATGTGTGCTATAATGAGTGAAAAACTTAGTGAAAAGCAAAATAAAACGACATACTCCAAAAAAAAAATTGTTTAATTTAAAATAAAATTGTTAATAGTATGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTATATACTATTAACAATGTTGACAATAAATATGTAAAAGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa33597
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000090743 | Nonsense | 569 | 2503 | 11 | 49 |
ENSDART00000141554 | Nonsense | 484 | 2418 | 9 | 47 |
The following transcripts of ENSDARG00000013500 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 5 (position 26810601)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 24637866 |
GRCz11 | 5 | 25141666 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAAGGGCCTTTTTAGAGGAGGGTAAATTGCAAAATCACCTGATGTGGCTC[C/T]AGCAGGTAACACCCTTTCTTTCAGTCACTAATCTAAAAGTATTTGGTTTC
Long Flanking Sequence:
CAATTGACTGGTAATTCAGTGGTCACAGGTTTCCAGCTATCTTCAAAATATATAGTTTTTTCATCAGAAAAAAGACAAACAGGTTTTGAACAAGTGAAAGGATGAGTAAATGATTACAGAATTTAGATTTTTAGTTGAACTATCCCTTTAAGCCTGTAAATATTTTTAAATATTTAGTATATTGACAATTTATTATGCTGCAGTTGAATGTGCAAACAAATAGTTTTATTTTTATGCTGTTTCATTTCTTCTGAATTCAAATGGCATTTATAAAGAAAAATTCTTCATTCGTTATTTTATTCAATTTATGTTGTACCCACTGAATAGAAAATCATTTGATTTGTTACATTTTTTATGATATTGTTTGTTCTCTTTAGGCCAATGAGACCTTTGCTTTTGTGGGGAATGTGACTCACTATGCCCGTGTGTGGCTCAACATCTCTGCTGAATTAAGGGCCTTTTTAGAGGAGGGTAAATTGCAAAATCACCTGATGTGGCTC[C/T]AGCAGGTAACACCCTTTCTTTCAGTCACTAATCTAAAAGTATTTGGTTTCATGCATGTGGTCGTTGGTAAAGATTTCTCTCAGAAAAAAACGCAGCAACAAATATTCTGCATTAACAAGTTAAAATAATATTAATAAGTCAAGATTTGTAATGTCTTTCATCAGGCCTCTACAGGTCTGAATTAGTACAAATACCCATATAAAGTGCCTGTTCTCCCTGTTCTCAAATAATAAAAATAAAATATTTTGATTTTCGACTATATGACATTGATGTTCATTCATTTCATACAATCACGATTCCATGATGTGTTCATGGGAAAAATTAGCAGTATGTTTATTTACTCCATGAAGATGTTTGTCTACAGTATAATTAAATATTCTTCTAATGCAAGTAATTCATCCATTAAATGCGTATATTAGTTAAATTCATTCTTCATCAAGCACATTGTTGCATGAAATAAAAGACTGAACTTTTAAAAAACTAACAAAGCATGATTGAGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa33596
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000090743 | Nonsense | 676 | 2503 | 14 | 49 |
ENSDART00000141554 | Nonsense | 591 | 2418 | 12 | 47 |
The following transcripts of ENSDARG00000013500 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 5 (position 26807193)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 24634458 |
GRCz11 | 5 | 25138258 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGATTTTCCAGACCAATAAAGATGGATCCCTGCCACCCCATGTTATGTA[T/G]AAAATTCGACAGAACTCGAGCTTTACCGAGAAAACCAATGAAATCCGACG
Long Flanking Sequence:
TTTTCCTATCAAATTGTGCCTTTAAAGTTGTGTGACAAAATGTCTGAACAATGTATAATCAAAATCAGTAAAGAGGTTTTTATATTGTTTTAATGCTACAAGAAAACCATATTGTGGTTGTAAGAATATTTGTCAAAAATGCTTGCCATAATGCATGGATCCTTAAGGAATTTTTGTTGTCCGGCCCAAAACAACAACAAAAAAGTTTCACTATTTGGATTCAAGTTAGGAAAAAAAAGATTCAATCATACACTCTTTTTGGCCAGGCAGTGTTGATTCATATATATATTTTTTTTTTAGGTTAAAAAATGCCTTTTTGTTAACAAGCATTGTGAGACCCATCCATTTCCCATTAAAACTACATTTTCATGATTCATTTAGCCCTTAGTCATACCTTGTTAAACTTAGCCAGTAGCCATATCTTTTAATCTGTGCTTTCTCTCTTTAGGTGTGATTTTCCAGACCAATAAAGATGGATCCCTGCCACCCCATGTTATGTA[T/G]AAAATTCGACAGAACTCGAGCTTTACCGAGAAAACCAATGAAATCCGACGTGCTTATTGGCGCCCAGGGCCAAACACAGGCGGCAAATTCTACTTCCTTTATGGCTTTGTGTGGATCCAAGGTATGAAAAAAGGCTAACAGAAAGCTCTATTTATTCCTCACATCAAGATGTTATATGATTGACCAAAACACAAGTAGATGAAAGTGGCACATTTTAGGTATTTTAACTGGCATTTTAGTCTATTTACTTTCAACAACTACCTTATTCATTTGAGAGGATGGTCTGTTCTGTATGTTCAGGCTTATTCTCATTTTTAAAGTCTAATATTGTGAAATGGTGGCTTAGTGGTTAGAACTGTTGCCTCACAGCAAAAAGTTTGCTGGTTTGAGTCCCGGCTGCATTAGTTGGCGTTTCTCTGTGGAGTGTGCATGTTCTCCTCGTGTTGGCGTGGGTTTCCTACGAGTGCTCACCTACAGACCAACAACATGCACTATAGGTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa40424
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000090743 | Essential Splice Site | 853 | 2503 | 17 | 49 |
ENSDART00000141554 | Essential Splice Site | 768 | 2418 | 15 | 47 |
The following transcripts of ENSDARG00000013500 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 5 (position 26800994)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 24628259 |
GRCz11 | 5 | 25132059 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCATATGGCTTTTTCTTACAATCTACGCTGTCGCAACCATCATGTTCTGG[T/C]ACTGAAGTGTGCAATAAGTCACATTTAGTTCTGTCGCTGTGTATTTTATT
Long Flanking Sequence:
TTGTTGATACAACACTAGTGATGATGTATCAGCTGGCAGAGGTGAAGAATTGTAACAGGTGTTTCCATTGTCAGTTTTCTCTTTGTTATCGAGCACATGATGCCTCTGTGTATGGTCATATCCTGGGTCTACTCTGTGGCCATGATGATCCAGCACATCGTAGCAGAGAAGGAGCAAAGACTGAAAGAGGTAAGAGAGCAGACTTTAGAGAATGGATTTCCTTCGCTGAGGAACTGAAGCATGGTCACTTATAAACTTGAGAGAGATCAAGAGCAGTGCTGTGGTTGACGCAGAGTGTTTTTCCACAGGTAATGAAGATGATGGGCTTGAATAACGCAGTGCACTGGGTGGCCTGGTTCATCACAGGCTTCGTGCAGCTTTCCATCTCAGTGACGGCCCTCACTGCCATACTGAAATACGGGAAAGTCCTCCTTCACAGCGATCCCTTCATCATATGGCTTTTTCTTACAATCTACGCTGTCGCAACCATCATGTTCTGG[T/C]ACTGAAGTGTGCAATAAGTCACATTTAGTTCTGTCGCTGTGTATTTTATTCTATTTACATACTGTAAACCCCAAAAAGGTAACTCAAACCGTTTGAGGAAACCGATTGCAACAAACCATCTAAGTTCAAAACCTAATCCTAATGAGTACTGTGAACTTATTCCATTTGAGTAAATGAAGCAATTTGAGCACAGTAAAACCCAATAAATGAAGAGAACTCAAACCAACTGAGTACTGTAAAACACAATAAGTTGAGACAACTCAAACTGTTTGAAGAAACCTATTGCAATAAACTATTTGAGTTAAAAAAATTATTTAAATTTAATGTTTAAGTAGAAGTAATGAGGTATGTATTACGCAATACCCTCAACACTGAGTTCAAAACTTTTTCCAAATGAGTAGAATTAACTTTCAGTAAATTTTGAGTTAATTACACTCATTTCAGTTGATAAAATTGACTGTTGGCTTTTACAGTGCATAGATTTTATATATATATATAAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa45201
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000090743 | Nonsense | 1219 | 2503 | 23 | 49 |
ENSDART00000141554 | Nonsense | 1134 | 2418 | 21 | 47 |
The following transcripts of ENSDARG00000013500 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 5 (position 26792023)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 24619288 |
GRCz11 | 5 | 25123088 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGAGTAGACCCATATGCCCGTCGAGCGATCTGGGACCTCATCCTGAAATA[T/A]AAGCAAGGTGATATTTTCTTTATTAACCACAATAAAGTTCTGCATTGGTT
Long Flanking Sequence:
TTGAAGAAGGACAAACTAAAGTGGTCACCGAAATTACTTGAAGCTGAAAACAGTAGTGATTAATCAAATATTACTGAAAATAAACTATTGAAAATAAGATATTGTATTCGAGTTGTTGTTCAAAAGATGCATTAAAAAGGCAAACAAATGAAACTGGCCTGGAAAAAATTGAAAGGTGCAAACACTGTTTTCAACGTCTGCACAAAAACTCATTAAGAGAAAAAGAACAATACTTTTAGACCATGCACTGGATACGCTTACCATTTTTTCTGTTTTTAAAATAGCAATACTCTTTATGTTGGTATTCACAGGATGATAGAGGATCTCGAATTATCTAATAAACGTCACAGTCTGGTTCAAACCCTGTCAGGAGGGATGAAAAGGAAGCTGTCAGTGGCCATTGCTTTTGTAGGTGGGTCTCGGGCAGTGATTTTGGATGAACCAACAGCAGGAGTAGACCCATATGCCCGTCGAGCGATCTGGGACCTCATCCTGAAATA[T/A]AAGCAAGGTGATATTTTCTTTATTAACCACAATAAAGTTCTGCATTGGTTTTTAAAAATAGTTACTAAAATAGACTCACCACCAGGTCGCACCATCCTGCTGTCCACTCACCACATGGATGAGGCTGATCTGCTGGGTGACCGCATTGCCATCATCTCTCATGGCAAGCTCAAGTGCTGCGGTTCTCCTCTGTTCCTCAAGAGCACATATGGAGACGGATACAAACTCACACTTGTTAAAAAACAGAGTGACTCACACACTGCAGGTATATTTATGGGAATGTCTCTCTCTTTGTTTGTGGATTTGCTCATTTGAGAAAATGTTAATGAATAATGTCTGAGTTGTCATGTAGGTGTTGCAAGATTGAGTCCAGCTTAAGTCATTCCCCTTTTTGATATCCTCTTTTTTCAAATCTCATATCAGGAAATGTACAAATGTTATTGTTACAACCCCTGGCACACTAGTGGAGTGGGCTTGCACACTTGAGCTGAGTATTTGGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa18415
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000090743 | Nonsense | 1561 | 2503 | 29 | 49 |
ENSDART00000141554 | Nonsense | 1476 | 2418 | 27 | 47 |
The following transcripts of ENSDARG00000013500 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 5 (position 26785724)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 24612989 |
GRCz11 | 5 | 25116789 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTAGGTGACCTTCCTCCCCTGATCCTGTCTCCATCTCAATATCACAACTA[C/A]ACACAGCCTCGAGGAAACWTCATCCCCTACGCCAATGAAGACAGATCTCA
Long Flanking Sequence:
AGAAGTATCAATTAGCCTTAAGTCTGTTTTATTAACATTAGGCAACATATTTACACATTTTTTAAAATGTATGGTTATTTCTTTCACATTTAAAGTTTTTTATAAAGCATTAAAAAGTACTTAAGGACTTAATGTTGTATTTTTAATTATTGTATTTATTACATGTCATTTCTTTTAAAATACGTTGACCTTGCCATGAAAATAGTCATAGATGCTGCTACAACAGTAAGAACAAACGAAACATACACAATTAAGAGCAATCAACACATTCCAAATGAAACGTTTTGTTAGTAGCTACAGTGAAAACTCTCCACTGATCCTTAATTTAGTTCATTTTTATTTCTGGATAAGATTACGTTTAATATTAGTGTTTATCTTGAACAAAAGCTATGCAGATCTTCATCAGCCCAGAGTGAAGGCTGTGCTGATGCTGGTCTTTCTCTGGTCCCTGTAGGTGACCTTCCTCCCCTGATCCTGTCTCCATCTCAATATCACAACTA[C/A]ACACAGCCTCGAGGAAACTTCATCCCCTACGCCAATGAAGACAGATCTCAATACAGGTCCGACACATATCCTCACTGTACAGCAAAATAACTTTGTGAACATCTATGAGTTGTTTACAATGAATGTTTGTGTAATTAACTATAATGTAGTCACAGACAATGATCATGTTTACTTCACACACATTTTCTGACAACTCACAAAAGTCAGGTTATTGTTATAAACTGGTTTACATACCAACCAATAACCCAGAAATCTTTATTAATAAATCATGCTATCTTGCGATTGTGATGTCAAAATGTAGTAACTTGTGCATCTAACTTCAAGTATTTATTATATTTTGTCAGATGTCATGTTCAATAAATCATTAAAAACCAAAGCATATTGCTGTATGCCAGCAGGAAACCTAGAGCTCATATGTTGTATGAGTCAAAATGACAGAAAAAGAAGTAAAGAATCATTGTACAATTCCCACCATAAATGTTTCATTTAACTTAATTTTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa40423
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000090743 | Essential Splice Site | 2376 | 2503 | 46 | 49 |
ENSDART00000141554 | Essential Splice Site | 2291 | 2418 | 44 | 47 |
The following transcripts of ENSDARG00000013500 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 5 (position 26765086)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 24592351 |
GRCz11 | 5 | 25096151 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGAAGTGATTCGGTTTTTTAACAGAAATTTTCCTGAGGCAATTCTAAAG[G/A]TGAGATTAGGTTAGATTAGGTTATGTTTTAGATCTGTATTTTCTGTTTAC
Long Flanking Sequence:
CCCACCACAGGTATGGACCCAAAGGCTCGCCGTTTCTTATGGAACCTAATTCTTGACATCATCAAGACGGGCCGCTCAGTAGTGTTGACGTCACACAGGTGCAGTATCTAATATAAAGGCTATTTTGGGTTTTAAAAGAACAGACCATTTAATGTATGATGTTCTGATGTCCTTGTTTGCAGTATGGAGGAGTGTGAAGCGCTGTGCACTAGACTGGGCATCATGGTTAATGGCAGGTTCAAGTGTCTAGGAAGCATCCAGCATCTCAAAAACAGGTTTGAAACTAATTCTCGGCCACTAAAATGTATGATTCAGGAATTCTACATTTATGAATGTGGGCATCTGAGTGCATTTATGACATTTTGCAACACTGTTTATTCCTTTATATTTATTTCAGATTCGGAGATGGATACATGATAACAGTACGCACTAAGACCACCGCTAGCGTTAAAGAAGTGATTCGGTTTTTTAACAGAAATTTTCCTGAGGCAATTCTAAAG[G/A]TGAGATTAGGTTAGATTAGGTTATGTTTTAGATCTGTATTTTCTGTTTACATTTTTTTTCTATTTTTTATGTATATGTTCTATTAATTTTAGTTTTGGTTTTTTTAGTTTGAACTATTTTATTTTTCAACTTTAACAATTAAGAAACAACTTGCTTGCGCTTTGGCAGCTAGCCGAAATACAAAAGCCTGAAGGTGCTGTATGTAAGTTTTTGACCATTCTAAAGCAAAACAATACCATAATATGTTTGGAGATATTTAAGAAACATGCTAAGTGAACATTCTTGTTTATCTAAAAAACAGTGCTAAGTCAGATATTCTGCTTTGAAAATGTACCTAATGTGCCGAAACAGCTGTCTTTGTTTTGGTTCTTTTAACTTCCTCACCTCCGATTGACAGTAGCAGATTCTGAAATGAGACGCAGATTCAGAGTTCCACATGAGCTGGTTATTAATTAGCAAATAATATAAATATTAAAAAGGTAAACATTAGGTGAGCAGGT
Associated Phenotype:
Not determined