ZMP

si:dkey-15f17.9

Ensembl ID:

ENSDARG00000013453

ZFIN ID:

ZDB-GENE-090313-193

Description:

Putative ATP-dependent RNA helicase TDRD9 [Source:UniProtKB/Swiss-Prot;Acc:B8A4F4]

Human Orthologue:

TDRD9

Human Description:

tudor domain containing 9 [Source:HGNC Symbol;Acc:20122]

Mouse Orthologue:

Tdrd9

Mouse Description:

tudor domain containing 9 Gene [Source:MGI Symbol;Acc:MGI:1921941]

Alleles

There are 6 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa17024	Essential Splice Site	Available for shipment	Available now
sa22335	Nonsense	Available for shipment	Available now
sa35527	Splice Site, Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa17024

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

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Mutation:

T > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000019202	Essential Splice Site	171	1342	4	35
ENSDART00000124958	Essential Splice Site	171	1344	4	35

Genomic Location (Zv9):

Chromosome 13 (position 31629067)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	13	31275015
GRCz11	13	31405465

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

GGTGGCACGTGAGCGCAAATGTACTCTGGGAAGCTTGGTGGGGTATCAGG[T/A]GTGAGATGCATGGCATACAATCTCTTTTCCATAACAGTATGAAAATAATA

Long Flanking Sequence:

CTACATTTACTGGAATCTATTGCATAGCTTATATTTAAGTTTAATCTGTTGTAATACAACCTTTGATTTATAGGTCCAGGAACAAGCCCTCCTTCACTGGCCAGTTATGAGTATCCAATTCTACCAATTACTAAGAACAGACAAGAGGTACTGTACATGCATGCATACACACAAATATATTCGCTATTCAGAAGATTTCACTATATCTCATGTCTGATTATGTTGGGTGTATTTCCCTTTTATGTGTTTATAAAAGTCCCTCTGTTTGTGTATGTAGTTGGTGTCTCTGATTGAGAATAACTCTGTGGTCATCATTCGTGGAGCGACCGGCAGTGGGAAAACCACCCAGCTGCCACAGTTCATTCTGGATCACTATGCAGAGAGAAACATACCCTGTAATCTGGTGGTCACTCAGCCTCGCAAAATTGGAGCCACAAGCATCGCCCGTTGGGTGGCACGTGAGCGCAAATGTACTCTGGGAAGCTTGGTGGGGTATCAGG[T/A]GTGAGATGCATGGCATACAATCTCTTTTCCATAACAGTATGAAAATAATATAGATATTAAATGGAATGGGAATTAATTTGCATAAGAATTTAAACTAGTGTATTGTTTATAAATTCCTCATTCCTACAGTATATATCTTGAATCCTGCAGTATAAAAATGTCAACTTTTAAAATTAAGAGTGTTAGCTATTAGACTGACTTAATGCAATAAGCATTAAGCGTTGTATAAATCTTTCTCTCTCTCTAGGTGGGTTTGGAGAAGATGGCCACAGAACACACCAAGCTGATTTATGTGACCACAGGAGTCTTACTGCAGAAATTAGTGTCATCCAAAACACTCACCGAATACTCGCACATCTTCATAGATGAGGTACACAAATAATCTGCAAGATATACAGTAATGGTAAAATGTCTGGAGTCTGCATGTTTTGAAAAGTCTTACCAAAGCTGCATGTTTAATCACAAATACTGTGAAACTGTAATATTGAGAATACTATTGA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa22335

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000019202	Nonsense	495	1342	14	35
ENSDART00000124958	Nonsense	497	1344	14	35

Genomic Location (Zv9):

Chromosome 13 (position 31633014)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	13	31278962
GRCz11	13	31409412

KASP Assay ID:

2260-6604.1 (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TGTGTGTGTGTGATTTGAATTGCAGCGGTCACCGTTGGCCAGTACCTTGT[T/A]GAAGGTAAAGTTGTTGGATATGGGGGATCCTCGCTCGGTTCTCTCCACAG

Long Flanking Sequence:

ATGTTAAATACGGTGGGTGTTGCTTTTATTTATCATTCTTTAAGGTCATCTTATTGTAAGAAGTATAAATTATGCCTTGTTTTGTGTGTGTTGTGCAGTGATTGACTTCTGCCTTGTGCGTCAGTTGGCATGTGATAAGGAAACCAATTACAGATGTCTCCGTATCACATGGGCATCCAAGACCAGTTGCAACCAGCGTCGGGGTATCACTTCATTTCTTTTTAAAGGCCACTGATTCTTATTTTTTTTGTTGTCTTATTTTGATTTTGTATCTGTTCTTGTGTGTTTTCCAAGGACGTGCCGGACGAGTCTCTAAAGGCTTCTGTTACCGGTTGGTGACGAGACATTTCTGGGAGAATGAGATTCCAAATTTCTCAATTCCAGAGATGCTGGTATGGGGATGACCACGTCTATCCATAATAGCAACACTTGAGCAGATTTACATAAGTGTGTGTGTGTGTGATTTGAATTGCAGCGGTCACCGTTGGCCAGTACCTTGT[T/A]GAAGGTAAAGTTGTTGGATATGGGGGATCCTCGCTCGGTTCTCTCCACAGCCCTCACACCACCCATCCTCGGTGACATCGAAAGGACCGTCCTGCAGCTCAAACAGGTCAGTACAGTTGATTTATTTATTTTTTTTATTGAACCAGCTTTGACATTGTTGAATAAAGTTACAACGTTGAAGTTCTAACCTCACTTTAAAATTTGCATCATTCATAACGGCAAACGGAGAAAAATTTTGTATCACATTTTTGAGCATTTAGTAGTTTGATAATTTTAGCAGGATCTTGTCTAAATGCATTGAAAGTGATTCTGAAGATTTTTATTTTGGCAGTATTTTAGTATAATTTAATTATATTGCTATATATTTTAGTAATTTGTTGAATTTTCTTTTTATCATATCAGTTTCTTGTTTGTTTATATAGATTTTTATGCTTAGATTTATTTTGTTTATATAAAACTTTGTTACACTTCTACCCAGTAATAGTAATAGTTTCAGCGTA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa35527

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

G > T

Consequence:

Splice Site, Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000019202	Splice Site, Nonsense	863	1342	24	35
ENSDART00000124958	Splice Site, Nonsense	865	1344	24	35

Genomic Location (Zv9):

Chromosome 13 (position 31638247)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	13	31284195
GRCz11	13	31414645

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TGAATCCCGAGAAACTTCCAACCAGCCGAGATTTCGTCATCAACATTACT[G/T]AGGTGAAAATACTACACATGAAAGTCCTCTCAAATAGGCTTAACCACATG

Long Flanking Sequence:

ATTTTGTGTTTGAAATTCACAATATTGGTAATCTCAAAAATAGCAGATGTCAGAGTTTAAGTCAGAAGTACAATGGTCACTTTCACTTATGCAATGAGTAGTCAAAATTGTGACATAAGAAGTCAAAGTTACTGTTTGATTTTATTGCAGAGCTTATGTGGAGTTTCACCGCTCGTGTGTGAGGGAGTCCGGTGTGTTACATGAGGTGTTATTGGCATTGCTGAGATCACGACACACCCCTGCACTCCACCTGCAGGTGCACCATGCAGACGAGGTGGAGTTCCATGCTAAAGGAAAGCCCATTGCCCACCTGCGTTACACAAGGTACCCACAAGCTCACACAGATCTGAACCAGAGATGTGTAGTTATTTAACAGAAGTCTCTCTCTCAGGGTTAACGTGGATGTTCAGAGCCACACTGTGTCACCTGTTGGAGTTCTGAGCAGCAGTGTGAATCCCGAGAAACTTCCAACCAGCCGAGATTTCGTCATCAACATTACT[G/T]AGGTGAAAATACTACACATGAAAGTCCTCTCAAATAGGCTTAACCACATGCCCTCCAACTGTTAGTCTGCTGTAAGTGAAAGATGAGAGGAGGAGCGCAAAAATACCCCCCCCCATACTTAATATTTCATTTTATTTGGAAATTGTCACGTAGGACTGCTTAAGAGGTGAAGACAAAAGGACAAGATCCAAATGCATTTAATGGTTGGATTGTCGTGCAGATAAACAGGTGGTAAAATAAGGAACATTTAAAATATTCATACAGACACAAGGTCAACTCAAATCGGGCATCCAAATGCAAAGTATTAAATAAACAAACAAAAATATAACCAGAGGCAAGGCTATGGTACACAACACATGACACAAATTAAAGTCTTATAACTGAACTAATGTGTGCAGGGTGCATATATAGTCCAAACAACCCTTGATGAAAGGTGTCAGCTGCATGTGTGTGATTAGTCGAAAGTGGACACCAGTGTGTGTATAGTGGTATGTAGGGAT

Associated Phenotype:

Not determined