Busch Lab

ZMP

cirbp

Ensembl ID:
ENSDARG00000013351
ZFIN ID:
ZDB-GENE-030131-5841
Description:
cold inducible RNA binding protein isoform 1 [Source:RefSeq peptide;Acc:NP_001035411]
Human Orthologues:
CIRBP, RBM3
Human Descriptions:
RNA binding motif (RNP1, RRM) protein 3 [Source:HGNC Symbol;Acc:9900]
cold inducible RNA binding protein [Source:HGNC Symbol;Acc:1982]
Mouse Orthologues:
Cirbp, Rbm3
Mouse Descriptions:
RNA binding motif protein 3 Gene [Source:MGI Symbol;Acc:MGI:1099460]
cold inducible RNA binding protein Gene [Source:MGI Symbol;Acc:MGI:893588]

Alleles

There is 1 allele of this gene:

Allele Name Consequence Status Availability
sa24148 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa24148
Status:
Available for shipment
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Availability:
Order Allele From ZIRC
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Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000105404 Nonsense 36 220 2 7
ENSDART00000105405 Nonsense 37 224 2 7
ENSDART00000126287 Nonsense 19 195 2 8
ENSDART00000132156 None None 55 None 2

The following transcripts of ENSDARG00000013351 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 22 (position 18769626)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 18520561
GRCz11 22 18545539
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGACGAGGGAAAGCTTTTCATCGGTGGTCTGAGCTATGATACAACAGAA[C/T]AGTCCTTGGAGGAAGCATTCTCCAAATATGGAACCATTGCCAAAGGTTTG
Long Flanking Sequence:
TGTAATGTTCCCCGGTGTGACTACCGTTTTACCTAAAAGGTCTCAAATGCAGCATGTAAGTAGTCGCGGAATTGTACGATTTTGTGACTTTCTTTGTTCACGCTGCTGGCGTGTCGTTGACGCTAATTGCTTTCCGTGACCTAGTTCCACTGACCTACTTTTTACAAAACCGGGTTTAGCATTAAGTAATCGTTTCACTGTATTTTTTTAAAACGAGGATCGATCAAGATGTTAAGTATTGGGTGCGCTGATGTATTTAAGATTAAAGCCTTTCTTTGAAGCAAAATGGCTGCAGCACGTTGTGAGGAAGGGGGATGGTTAGAAAATGGCGTTTCCTTGTGACGCACTTTTAGGTGCGGTGTTTTTGCTTTCGATTCTCGTGTGCACGCGGTGATCTATATACTTTACGCTTTTAAGTCAACATTTTTTTTTTTCAGGTTATCATCATGTCTGACGAGGGAAAGCTTTTCATCGGTGGTCTGAGCTATGATACAACAGAA[C/T]AGTCCTTGGAGGAAGCATTCTCCAAATATGGAACCATTGCCAAAGGTTTGTATTTAGTTCCATTTTACGTGTGTATTTGTATACTTTTATATTAATTTGTATATGTGTGTGTAAAATTAATTTGTAATTTTTCATTTTATTTTTTTATAGTTGATGTTATCAGAGACCGTGAAACTGACCGTTCTAGAGGCTTTGGCTTTGTGACCTTTGAAAATCCAGAAGATGCTAAGGATGCCATGGCTGCCATGAATGGAAAGGTTAGAATTTTAGCCTTTTAATGAATAAAATCTGTAATTTTGAGTGCTAAGACACCATGTATTTGTTGTAAGAGGGTTTTTGTAACGTCTATCCTTTTTTTCTGGGTATTTTTCAGGTTTAGATAAATGTTATTCTAATTTGAATTGTGCATGTTTGAGTCTTTTTTGTCGTTTTTGTTTTCCAGCAAGTTGATGGTCGCATGATTCGCGTTGATGAAGCTGGCAAATCTGGTGGACGGTCTG
Associated Phenotype:
Not determined