ZMP

si:dkey-148b12.1

Ensembl ID:

ENSDARG00000012776

ZFIN ID:

ZDB-GENE-070705-296

Description:

probable global transcription activator SNF2L1 [Source:RefSeq peptide;Acc:NP_001093467]

Human Orthologue:

SMARCA1

Human Description:

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [S

Mouse Orthologue:

Smarca1

Mouse Description:

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 Ge

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa40402	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa40402

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > G

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000020725	Essential Splice Site	103	1036	3	25

The following transcripts of ENSDARG00000012776 do not overlap with this mutation:

Genomic Location (Zv9):

Chromosome 5 (position 23667438)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	5	21380310
GRCz11	5	21884110

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GACCCCGAATCAAACAGGATGAGAAGCAGAACCTCCTTTCAGTTGGAGAG[T/G]GAGTCACACACATACACACACAGAGAGAGACAGATGTGTCATCATAATGA

Long Flanking Sequence:

TATGTAGTTAATTTGTATATTTATTTATAACAGTGTATTATTTATAACTGTACATCCTGGCATGCTGTTAAAATTGCCTCTCAAGGACTTTGATTAGATACAAGTGATAAATAATCACATTATATTATATAATATAATATACACAATAATCTTATAAAATTATAATATAATTTATAAATTATTTATTTACTTTTTTATTATATTTTTTCCCTCTGAAGCACCATGTATATTTACTGTATTTGACCAAACACGGTGAAGTTAAATTAAGTTTGAAGTGATCTTTTGCACGTCCGATTTAACTCAAAAGTCTTCCTCTTTGTTTTTGTCTGTAGAAAACTGACCGTGCGAACAGATTTGAGTTCCTGCTGAAGCAGACTGAACTGTTCGCTCATTTCATTCAGCCTGCCAGTCAGAAGTCCCCCACGTCACCTCTGAAGGTGAAAATGGGGAGACCCCGAATCAAACAGGATGAGAAGCAGAACCTCCTTTCAGTTGGAGAG[T/G]GAGTCACACACATACACACACAGAGAGAGACAGATGTGTCATCATAATGATTTGGCCTTATTCATTTCTGGATGTGTGTTTCAGTAACCGGCATCGTCGAACAGAGCAGGAGGAGGACGAGGAGCTCCTATCTGAGAGCAGGAAGGCAGATAATGTTCTTGTTCGTTTTGAGGAGTCACCCTCATGTATGAATCACTGTTTTTATGAGCAGTCCATCTGTTTCTGTTTACACAAATAGTAATTAACAGTGGTAGATTAATAATTCATTGGTTATTTTAAAAAGAGCCTGTCATTATTTACTCATCCTCATGTCATTAGAAACCCATTTGCTGATTTTTTTTTCCAATGGAACACAAAAAATACTGCAATGTTAATGACATGACATTCACTTATGAGACAGCCTACAATTCATGACATTTGATTTAATTGACATCTGAAGATTTAATTGTCACTTTTAAATAATGAATTTTGCCCTGTTCCTCATGCTGATGACTTTTATG

Associated Phenotype:

Not determined