ZMP
gtf2e2
Ensembl ID:
ZFIN ID:
Description:
general transcription factor IIE, polypeptide 2, beta [Source:RefSeq peptide;Acc:NP_997896]
Human Orthologue:
GTF2E2
Human Description:
general transcription factor IIE, polypeptide 2, beta 34kDa [Source:HGNC Symbol;Acc:4651]
Mouse Orthologue:
Gtf2e2
Mouse Description:
general transcription factor II E, polypeptide 2 (beta subunit) Gene [Source:MGI Symbol;Acc:MGI:1915
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa32665 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa32665
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000016488 | Essential Splice Site | 182 | 291 | 5 | 8 |
The following transcripts of ENSDARG00000012672 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 1 (position 21643785)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 22178952 |
| GRCz11 | 1 | 22869691 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACTGGATGATGTTGAAGAGGGGCTACCCAATGCAGCCAAGGCTATTAAAG[T/C]AATACACCATCATGCTGTCACTCATTAGTAACAAAACAAAAAAAAACATT
Long Flanking Sequence:
CTTTACAGATATTGCTGTATGTAAAATTGAAAATGTATGTAAATTTTTTTTTCTTTTAAAATATATTTATAAGGCCACAAAGAGTATGGGATAGCTATGTTCCTGTGGTTTTAAATTATTATTTTTATGTTTATGTTTTTTTATTCCAGAATATTATTATAATTATATAATACTTGGATTTATATGCTGCAGAATACTTTTATTGACCAATGTTCCAACAAGCAATGTAATGACACGCAATATATGTTTTCAAGGGCAAGATCGACATTCGAACAAGAATTCAGCATGTAACCTTTCCCTCTCTCCTTCCCTCCAGGCATTAGCAAGTAATCCTAAGATTGATGTGCGGGAAGGGAAATATGCCTTTAAACCCAAGTATCATCTGAAGGATAAGAAAGCTCTGCTTAGACTTCTGGACAAACACGATCAGCTTGGTCTCGGAGGAGTGTTACTGGATGATGTTGAAGAGGGGCTACCCAATGCAGCCAAGGCTATTAAAG[T/C]AATACACCATCATGCTGTCACTCATTAGTAACAAAACAAAAAAAAACATTTACTAAACCGTACATTTAAAGGGGACCTGATATGCCCCTTTTTACAAGATATAAAAGAAGTCTCTGATGTCCCTAGAGTGTATATGCAAAGTTTTGGCATCTTATAACCCATGAATAATTTTTTTAGTTCTTTGAAACTGCTCCTTTTAGCCTTTGATCCAAACAGTGCTTTTATGGTGACTGTCTCTTTAAAATCAAATGAGTATGTACTCCCAGCCCTCCTTTCAAAAGAGTGCAGAGCTACAGACAACCATCACCATTCCATCATTAGTGACTGCATCTCACTTAAAACTGTTTATGCTAATAATGGAGAGATTGTCACTAATGGGCGGGGCTTTCCCCCTCTGATGTACAAAGGAAGAATGTCAGACAGTGTTTCTGCAGACTGCTTTTATGAAGTGTGATTAAAATGAAATTAATTAATGATTTTGTACAGTTGAAATCTGGCTA
Associated Phenotype:
Not determined