ZMP
si:ch211-199m3.9
Ensembl ID:
ZFIN ID:
Description:
cyclic AMP-dependent transcription factor ATF-6 alpha [Source:RefSeq peptide;Acc:NP_001103989]
Human Orthologue:
ATF6
Human Description:
activating transcription factor 6 [Source:HGNC Symbol;Acc:791]
Mouse Orthologue:
Atf6
Mouse Description:
activating transcription factor 6 Gene [Source:MGI Symbol;Acc:MGI:1926157]
Alleles
There are 5 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa23750 | Nonsense | Available for shipment | Available now |
sa1154 | Nonsense | Available for shipment | Available now |
sa37085 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa23750
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000007700 | Nonsense | 177 | 653 | 6 | 16 |
Genomic Location (Zv9):
Chromosome 20 (position 33884530)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 33957043 |
GRCz11 | 20 | 33859922 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCACAGCCAAACCTCTCCAACCAGCAAAAAGACCCATCCAGGTGTGCCCC[A/T]AGGTTTCCATTCAGCCTAAACCAATCATTACAGCTGTTCCCATCTCCCGT
Long Flanking Sequence:
CTTTCTCATGGCAAATCAAATGCATTGTAAACTCTGTTTCCTGACCCAATAAATTGATGTCAGCTTTAAAGTCTTGTAAACGTGTTAACACTTTTTTTTACTTTTAAACTAAACATGCTAATTGGTGGCTTGTCTTTTAGAGGCCTAACTAACCATTCCACTACACGTTTTACATATCGCAATTACTTTTCCCTTTTCTTTAATTGTTTTCAAAATTGATTTTAGGATGAGGCACTGTCTCCAGACTCGTGGCGTTCCCATCCCTCTCCGCTGTCCGTCTGCTCTGACTCCAGTGGATTTACTGAGGCACCTAATGAGAAGAAGCCATCTAAGAGGACCAATCAGACAAAAGGTAAGTGAAATAGTCTAAAAGCTTGAGCTTATGTTTTATTGAATTAAACAACATCCAAATTTTTGGAATATGGTTGATTTTTAACAGTCCGTTTGTTCTCACAGCCAAACCTCTCCAACCAGCAAAAAGACCCATCCAGGTGTGCCCC[A/T]AGGTTTCCATTCAGCCTAAACCAATCATTACAGCTGTTCCCATCTCCCGTCCGGCAGCCCCTCTTCAAACCAAGATCATCATCCAGCCGCTTCAGGCCACAGTTCTGCCTGTGGTGAAACCTCCACCTGTCACTATTCAACCAGCGCCCCCTACAGGTAATAAAAAAAACACACCCTATTTTAAACTTTTATTTTATTTCTTAAGTGAGATGCATAATAGCAGGTCTCAATTTGTTTGATCAGCTATTTTTTATTTAGTTTTTTTTTTGCTGTAGGTAAAACAATTGGATTTCAGGCTGTATTGAGGGTTTCTGTTTATGCATACAAAAAACAACAGATGGCGCTAGATTTCCTTTTTTGAGTAACTGGTGGGCTTCTTATGCTAATGTATGTCATAAAGAAAACCTATGGTAGAGTTGTTCTTCAGTTGCTTGTTGTTCACCTTTTGAGTGTTGAAGTAGATGTGAATGAACTTCCTGACCAAAAACAAATTTTGTTTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1154
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000007700 | Nonsense | 428 | 653 | 11 | 16 |
Genomic Location (Zv9):
Chromosome 20 (position 33862048)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 33934561 |
GRCz11 | 20 | 33837440 |
KASP Assay ID:
554-1065.1 (used for ordering genotyping assays)
KASP Sequence:
TGTTGTTAAACTTTCCTGGCTTTAACATGACTTTTGTCTTTCTCATAGGT[T/A]GGAGGAGGGGGTTTCAGAGCAGAAGGCATTGATGGTGGTCAAGGATCCTC
Long Flanking Sequence:
GCTTCTCTGTGTCAGCAAAGATTGTGAGACATCGATCCAGCTTCCCAGAGCTTCACTGTCACTCTTCCTTAGCCAGAAGTGTTTGACATGTCATTTCAGGGGCCACATGTTTTCCTGTTTGGGCTATAAATGCCTATATCAGCTTCTTGCGGGGAGATGGTTTAGTATTTTTGTCGATGATGTCTTGGCTTTATTTTGCAGGTTCACTCAATCTGTGCTAAAAATGAACTTGGCATTAGTTGTTGGCACTGTTCATTTATAGTTTTACGAGATGCTGTCTTTTCCTTAGATAAGATAAGAAGCATCTTGGCTCGCGCACTTGCACATGGTATTCTTTCAGATGTTAAGCCAGTACCAGGAGATGATTAAAACAAGAGTCTTGTAAAATTCCATACGTCGTTTTGGAATTGAATTATCCTTATAAAGACTCAAACTATTTCTTGGTACCCGTGTTGTTAAACTTTCCTGGCTTTAACATGACTTTTGTCTTTCTCATAGGT[T/A]GGAGGAGGGGGTTTCAGAGCAGAAGGCATTGATGGTGGTCAAGGATCCTCTGTATTTCAGAACTCCACCCCCCTGCCAGCCACCTGTCAACAGGACCAAGTGCATAAAGTCAGTCCTGCACATTGATATTGCTCCATACTCTTTTATATTCAACTGCTGCTTTATTAGACATTTAATAGAGTTAGTAGGATCTGGCAGTTCTGTGACGAGCTGATTCATTAAAAAGTTTGACTGCAGAGCATCTGGTCTGCAGTGCCTCAGATTTGCCCATCTGATCTAAACCTAGAAAGAACTTTTATTACAATTGGTCTAGTATTTAAAGTTCCGAGCTTTTGTTTTAATGATAGTAAGGGATAATTGTAGGCGTTTTGACTGGTGTTTTAACATCTGTTAAACTGGCTTTTAAAAAAGCAAATAATTCCAGTTAAATTCCATGGTATTAGTGGATGTTTCAAAATAAACCTGTGATCTCACAACATAAATATTACTGAACCAACACT
Associated Phenotype:
Normal
Stage | Entity | Quality | Tag |
---|---|---|---|
Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa37085
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000007700 | Nonsense | 446 | 653 | 11 | 16 |
Genomic Location (Zv9):
Chromosome 20 (position 33861993)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 33934506 |
GRCz11 | 20 | 33837385 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGGGGGTTTCAGAGCAGAAGGCATTGATGGTGGTCAAGGATCCTCTGTA[T/A]TTCAGAACTCCACCCCCCTGCCAGCCACCTGTCAACAGGACCAAGTGCAT
Long Flanking Sequence:
CTGTCACTCTTCCTTAGCCAGAAGTGTTTGACATGTCATTTCAGGGGCCACATGTTTTCCTGTTTGGGCTATAAATGCCTATATCAGCTTCTTGCGGGGAGATGGTTTAGTATTTTTGTCGATGATGTCTTGGCTTTATTTTGCAGGTTCACTCAATCTGTGCTAAAAATGAACTTGGCATTAGTTGTTGGCACTGTTCATTTATAGTTTTACGAGATGCTGTCTTTTCCTTAGATAAGATAAGAAGCATCTTGGCTCGCGCACTTGCACATGGTATTCTTTCAGATGTTAAGCCAGTACCAGGAGATGATTAAAACAAGAGTCTTGTAAAATTCCATACGTCGTTTTGGAATTGAATTATCCTTATAAAGACTCAAACTATTTCTTGGTACCCGTGTTGTTAAACTTTCCTGGCTTTAACATGACTTTTGTCTTTCTCATAGGTTGGAGGAGGGGGTTTCAGAGCAGAAGGCATTGATGGTGGTCAAGGATCCTCTGTA[T/A]TTCAGAACTCCACCCCCCTGCCAGCCACCTGTCAACAGGACCAAGTGCATAAAGTCAGTCCTGCACATTGATATTGCTCCATACTCTTTTATATTCAACTGCTGCTTTATTAGACATTTAATAGAGTTAGTAGGATCTGGCAGTTCTGTGACGAGCTGATTCATTAAAAAGTTTGACTGCAGAGCATCTGGTCTGCAGTGCCTCAGATTTGCCCATCTGATCTAAACCTAGAAAGAACTTTTATTACAATTGGTCTAGTATTTAAAGTTCCGAGCTTTTGTTTTAATGATAGTAAGGGATAATTGTAGGCGTTTTGACTGGTGTTTTAACATCTGTTAAACTGGCTTTTAAAAAAGCAAATAATTCCAGTTAAATTCCATGGTATTAGTGGATGTTTCAAAATAAACCTGTGATCTCACAACATAAATATTACTGAACCAACACTTATGTGTCAGGTTCATTTGAGACTATTCAAATGTGCACAATTGCAGTGCATGTTT
Associated Phenotype:
Not determined