ZMP
slkb
Ensembl ID:
ZFIN ID:
Description:
STE20-like kinase b (slkb), non-coding RNA [Source:RefSeq DNA;Acc:NR_023330]
Human Orthologue:
SLK
Human Description:
STE20-like kinase [Source:HGNC Symbol;Acc:11088]
Mouse Orthologue:
Slk
Mouse Description:
STE20-like kinase (yeast) Gene [Source:MGI Symbol;Acc:MGI:103241]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa38292 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa25664 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa39683 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa38292
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000017965 | Essential Splice Site | 261 | 1132 | 6 | 28 |
| ENSDART00000134399 | Essential Splice Site | 261 | 969 | 6 | 19 |
Genomic Location (Zv9):
Chromosome 1 (position 50141714)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 48990895 |
| GRCz11 | 1 | 49635315 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGAAGATCGCCAAAGCTGAGCCTCCTACTCTACTACAGCCCTCCAAATGG[T/C]ACCAAAAAACATGCTTGTGATTGATATAGAACAGACCGTTGGTTTTTGAA
Long Flanking Sequence:
ATTTCAAGCTAGCATGTAACGATGTGGAGGCTTAAGCCACAAAATCATTGTATTCCATCATTGAATTTAAAAGCAAGCATGTTTATTTTGGAAAAACTACTCTTTTTCAGGCAGATTGATTCCTAACAAGCACATTTTCTTTATCTTTCAGCGGATTTTGGAGTGTCTGCCAAGAACACGAAGACTGTTCAGCGAAGAGACTCTTTCATTGGAACCCCTTACTGGTGAGTTTACCATACCAGCTTCTTGCACTGCTACACATTGGCATTAGAAACATGCTGATGTCTCTGGGTTTGTCCTTCAGGATGGCTCCAGAGGTGGTGATGTGCGAGACGTCGAAGGACAGGCCGTATGACTATAAGGCTGATATCTGGTCTCTGGGAATCACTCTGATTGAACTGGCTCAGATCGAACCTCCAAACCACGAGATGAACCCGATGAGAGTCCTGCTGAAGATCGCCAAAGCTGAGCCTCCTACTCTACTACAGCCCTCCAAATGG[T/C]ACCAAAAAACATGCTTGTGATTGATATAGAACAGACCGTTGGTTTTTGAACATACATATATTTTTTTATATTAATGTAAAATTGTAATATTGATTTTTTTTTTCTTTAAAACTATTCAATTGTCTTAATTAATAAAACCGTAAATAAGCTTTGGTTTCTCACAATACATGCCAAATACATGCACTGTAGGAGAATTGGGTAAGCTAAATTGTTCATAGTGTATGTGTGTGAATGAGAGTGTATGGGTGTTTTTCACAGTGATGGGTTGCAGCTGAAAAGGCATCCGCTGTGTAAAACATATGATGGATAAGTTGGCGGTTCATTCCGCTGTGGTAACCCCTGATTAATAAAGGGACTAAGCCGAAAAGAAAGTGAATGAATGAATGAAAGCAGTAAATTATATTACTGCATATTTTGCCAATGCAAAAAGCTTCACAAAGTTGAAATATGGTTTAAAATAAATGTAACAAATAAAATAGATTATATGCAAGTTAAGATGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa25664
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000017965 | Nonsense | 611 | 1132 | 18 | 28 |
| ENSDART00000134399 | None | None | 969 | None | 19 |
Genomic Location (Zv9):
Chromosome 1 (position 50133048)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 48982229 |
| GRCz11 | 1 | 49626649 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTACCAATAAATAAACAAATTTTTAAATTAGCTTTTTTTCTAGGGAAATA[T/G]TACAATATTACAAAAGTTATTATCGCAGTACTCAGCAACATCATCTATTC
Long Flanking Sequence:
TTTTCCCTTACGTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATTTATTTATGTATTTATTTATTTACTTTTCGTTTAAGCTTTTTTCTTTTCTTTTACCCCATTTCTTTTAGTTTTTATCCTTTCTCTCTTTCCTTCCTTCTTTCTTACTTTATTTATTTTAGTTTCTATCCTTTCTTTCTTTCTTTAACTTTTTAATTTCTTTCTTTTTACTTTTTATTTATCTTTCTTTTTTCTTTCACTTTTTTTTGCTTTTTTTTTGTCTTTTTTCTCTTTCTCCTTTTTTTCTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCATCTGAATTAGATTTAATTAAATCATGAAAACAATTATTACCTGTTTTTTTACCAATAAATAAACAAATTTTTAAATTAGCTTTTTTTCTAGGGAAATA[T/G]TACAATATTACAAAAGTTATTATCGCAGTACTCAGCAACATCATCTATTCCAGTATCGTGCAGCTCTACTTAGTTTGACATGTATTGCTTTCTGTCGACAGAGAAAGCAGTGATCGAGGAGTCCAGTAAAGCAGTGGCTCCATCATCTCCAGTGCCAGAGAAAGAGAAGAAGGAGAAGCTTGAGGACGAGCAGAAGCAGAGCCCAGTGAAACCCCATTATGTGAAGAAAGAGGACTCCGATTCGGGCATCAGCTCTACAACTGACACCAGCAGCAACAGCAGCAGTATAGACCTCAACCTGTCCATCTCCAGCTTCATCAGCAAATCCAAGGAGATGGGAACCAACTCACAGCAGGTCAGAAACGCTACTGATGCTGAGAGTCTCTGATCATATAGTGACTATAAAAGCATTTCAGGGGAATAAAAAATGACTTTAAAGTGGTTCAGTGAATCAGTTTCAAACTACGAAATGCTAAAAAAAATTTTTGATAAAAAAAAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39683
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000017965 | Essential Splice Site | 795 | 1132 | 21 | 28 |
| ENSDART00000134399 | Essential Splice Site | 632 | 969 | 12 | 19 |
Genomic Location (Zv9):
Chromosome 1 (position 50129323)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 48978504 |
| GRCz11 | 1 | 49622924 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCAGCAGCAGAGAGATCAGATCTGCCGACGCTTCGAACACGAGACCACGG[T/C]CAGACACCACATCACACACACTTGTATATGTGGTTTATGATGCGTTGGCG
Long Flanking Sequence:
CTGAGTAGTATTAAGTACCCATGAATATACTGGGGCATTAGGACCCACACAGACTGCAGGTTAGGTGCCCCCTGCTGGCCTCACTAACACCACTTCCGGCAGTAACCTAGCTTTCCCATGTGGTCTCCCATCCAGGTACTGACCAAGCGCAGCCCTGCTTAGCTTCAGTGGGCGACCATGTGAGAGTTGCAGAGAGCTAGCTGCCGGTAAACTTGTCGCAGTTTGCTTCCTTGTTTTAGATTTTTTTCCATATTCAATATCTGGTTTGTTAGTGAATTAATTAGTGAAAGCTAATAGCGAAGGTTCCTCCATCCACACTGTGTGTGTATATGTATTGTTGGCTCAGTTTCAGAGTGTGTGATGTGTGTGTTGCAGGCGTCAGGAGCTGCGAGAGCTGAGACTCCTGCAGAAGGAAGAGCAGAGAGCACAACAACAGCTCAGCAACAAACTCCAGCAGCAGAGAGATCAGATCTGCCGACGCTTCGAACACGAGACCACGG[T/C]CAGACACCACATCACACACACTTGTATATGTGGTTTATGATGCGTTGGCGTAATATGTTTTATACCATAAAATATGTATTATATGGTTTTGAAGTACTTATATTGACCTTATTCTGCAATGTCGGAAGTCTTTTCATTTTTTAAAGTGGTTTAAATCAGGGGGCTCAACCCTGTTCCTGGAGATCTACCTTCCTGTAGATTTCAGTTGCTACCCATTTCAAACACACCTGCCTGTAATTATCAAGTGCTGTTCAGGTCCTAATTAATTGGTTCAGGTGTGTTTGATCAGGGTGAGAGCTGTGTTTTGCAGAAAGGTAGATCTCCAGGAACAGAATTGAGCAGCCCTGGTTTAAATCATCTGATTCAGTCACCTATGGAGGAGAAAATGACTAGGAATAATAAATGGCATGATTCAAATGAGCCAGTCAGAGAATGAATGTGCACAGCCACGCCTTTATTTTCAATAGTCTGTGTTTTGGTTAATCTACAGTGTCAAAGGT
Associated Phenotype:
Not determined