ZMP

col1a1a

Ensembl ID:

ENSDARG00000012405

ZFIN ID:

ZDB-GENE-030131-9102

Description:

collagen alpha-1(I) chain [Source:RefSeq peptide;Acc:NP_954684]

Human Orthologue:

COL1A1

Human Description:

collagen, type I, alpha 1 [Source:HGNC Symbol;Acc:2197]

Mouse Orthologue:

Col1a1

Mouse Description:

collagen, type I, alpha 1 Gene [Source:MGI Symbol;Acc:MGI:88467]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa1748	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa1748

Status:

Available for shipment
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Availability:

Order Allele From ZIRC

Mutation:

G > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000009393	Nonsense	1179	1447	48	51
ENSDART00000047010	Nonsense	1179	1366	48	52

The following transcripts of ENSDARG00000012405 do not overlap with this mutation:

ENSDART00000140586

Genomic Location (Zv9):

Chromosome 3 (position 23526433)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	3	23104644
GRCz11	3	23235192

KASP Assay ID:

554-1741.1 (used for ordering genotyping assays)

KASP Sequence:

GACCTCCTGGACCTCCCGGCCCCCCTGGAGCACCTGGACCCTCTGGTGGT[G/T]GATTCGAYATTGGCTTCATTGCCCAGCCACAGGAGAAGGCCCCTGATCCC

Long Flanking Sequence:

ATTCTGTTTGGAATATGGAATTTGCAGTATATGCCTTGATAATAAAATCTGTAGATTGAAATCTGTTTTCATTTCCAATATTCCTGTCCATAGGGACCCTCTGGAGAGTCTGGACCCGCTGGTGCTTCTGGACCCGCTGGACCAAGAGTAAGTGTTATTATAAAACTTGCACTACTGCTGTTTCTCTGTTTTGATCGAATACACCATGTCCTTAGTTCATTCTGATTAAATTTGAATGTTTCTCTTATTGTGTTAATAGGGCCCAGCTGGATCTGCTGGATCAGCTGGTAAGGATGGTATGAGTGGCCTCCCTGGACCCATTGGACCTCCTGGACCCCGTGGTCGCAATGGAGAAATTGGACCAGCTGTGGGTGATTCTTTCCTTTTTTACATAATCGTGCACTCAATAAACTAAATATATGCATTAACACAAGCGTATATGGTTATAGGGACCTCCTGGACCTCCCGGCCCCCCTGGAGCACCTGGACCCTCTGGTGGT[G/T]GATTCGACATTGGCTTCATTGCCCAGCCACAGGAGAAGGCCCCTGATCCCTTCCGTCACTTCCGTGCCGACGATGCCAATGTGATGCGCGACCGTGATCTTGAGGTTGACACCACCCTTAAGTCCCTGAGCCAGCAGATTGAGAGCATCATCAGCCCAGACGGCACCAAGAAGAACCCTGCCCGCACTTGCCGTGACCTGAAGATGTGCCACCCAGACTGGAAGAGCGGTATGTTACTTTTCTTTGTTGTACAACAATAGAGAAATGTCTCATTTAAAAATTTGTAAATGTATTGCCTTGCATAGTTTAATCCCATTCCTCTCAAAACCATAACACAGGCGAGTACTGGATTGACCCTGACCAGGGCTGCAACCAGGATGCCATCAAGGTCTACTGCAACATGGAAACTGGCGAGACTTGCGTCAACCCAACTGAGTCTGCTATTCCCAAGAAGAACTGGTACACAAGCAAGAACATTAAGGAGAAGAAACACGTCTGGT

Associated Phenotype:

Normal

Stage	Entity	Quality	Tag
Larval:Day 5 ZFS:0000037	whole organism ZFA:0001094	quality PATO:0000001	normal PATO:0000461