ZMP

mmp13a

Ensembl ID:

ENSDARG00000012395

ZFIN IDs:

ZDB-GENE-031202-2, ZDB-GENE-031202-2, ZDB-GENE-031202-2

Description:

matrix metalloproteinase 13a [Source:RefSeq peptide;Acc:NP_958911]

Human Orthologues:

MMP1, MMP27, MMP8

Human Descriptions:

matrix metallopeptidase 1 (interstitial collagenase) [Source:HGNC Symbol;Acc:7155]
matrix metallopeptidase 27 [Source:HGNC Symbol;Acc:14250]
matrix metallopeptidase 8 (neutrophil collagenase) [Source:HGNC Symbol;Acc:7175]

Mouse Orthologues:

Mmp12, Mmp1a, Mmp1b, Mmp27, Mmp8

Mouse Descriptions:

matrix metallopeptidase 12 Gene [Source:MGI Symbol;Acc:MGI:97005]
matrix metallopeptidase 1a (interstitial collagenase) Gene [Source:MGI Symbol;Acc:MGI:1933846]
matrix metallopeptidase 1b (interstitial collagenase) Gene [Source:MGI Symbol;Acc:MGI:1933847]
matrix metallopeptidase 27 Gene [Source:MGI Symbol;Acc:MGI:3039232]
matrix metallopeptidase 8 Gene [Source:MGI Symbol;Acc:MGI:1202395]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa34965	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa34965

Status:

Available for shipment
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Availability:

Order Allele From ZIRC

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000005436	None	None	169	None	11
ENSDART00000011573	None	None	476	None	10
ENSDART00000126444	Nonsense	373	476	8	11

Genomic Location (Zv9):

Chromosome 10 (position 39968139)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	10	38658110
GRCz11	10	38601859

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GTGAGAAGGTTTGGGCTCTCTATGGCTATGATATTGTGCAAGGCTATCCC[A/T]AGAGTCTCAGCATGTTCCGTCTGCGGAAAAATGTGAAGAAAATCGACGCA

Long Flanking Sequence:

CCACATATATTGATAAATGTCCTCTCTCTGTTAAACATAAATTGAGAAATGATTAATTTGGGGGGGGGGGGCTAATAATTCTGACTTCAACTGTATAGTGACTTGGGATCCTTTGATTGGAGGATCGTGATTAGCTATTGTGGGCCAGTTGGGTCAATCATGAGCACGTGCTCCTCTAGTAGTTTAATATTAAACCTCACTTATTTTAACACTTTTCAATGCGATTTTCTTCAGTGTTTAGCATTTTTGAACCCTCAACCCTGGAATTAATGAAACATGCTTAAAAAAATAACTCTTTTAGTCTTTCTAGATACAGTAGGATTTAGAAAATTGTAGGTTCTGCATTTTTTATATCTATTGTACTGCACATTACCTTCATGGAACAATATAGATGTTAAAATAACTGTATGTCATAAGAAATGAAAATAATTTGGAAATTGTTGTTCTCAGGTGAGAAGGTTTGGGCTCTCTATGGCTATGATATTGTGCAAGGCTATCCC[A/T]AGAGTCTCAGCATGTTCCGTCTGCGGAAAAATGTGAAGAAAATCGACGCAGTCCTCTACAAGGAAGACAGCAACACAATCCTCTTTTTCGCCAACAACCAGGTTTACAGGTCAGTGAATCACTTGAAAAAAATCGTTTCAAATTAGCTGCTTTTACAAAAATCGTCACCTAACAAGAATGAATGTCTTGCAGTTATAATGAAAGAATGAAGAAAATGGATAAAGGTTTTCCTAAACCAGTGCAGAAGGTTTTCCCTGGAATGACCGGGAAGGTCACCGCAGCCTTCCAGTATAGAGGTATAAAGGGTTTTACTATACAATATCACAAAAGAAAAAAAAAACTGAGGTAAAATCACATCTAACACTGTCTTTTTTGTTTTTTTGTAGGTTTTAACTACCTCTTCAGTGGATCAAAGATGCTTGAGTTTGGCTCCAACAACAAGCTGTTACGCGTCCTGAACAACAATTATTTCCTGCCGTGCAAATAATCTATTTAATACT

Associated Phenotype:

Not determined