ZMP

sgce

Ensembl ID:

ENSDARG00000012138

ZFIN ID:

ZDB-GENE-030724-1

Description:

epsilon-sarcoglycan [Source:RefSeq peptide;Acc:NP_001002594]

Human Orthologue:

SGCE

Human Description:

sarcoglycan, epsilon [Source:HGNC Symbol;Acc:10808]

Mouse Orthologue:

Sgce

Mouse Description:

sarcoglycan, epsilon Gene [Source:MGI Symbol;Acc:MGI:1329042]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa36898	Nonsense	Available for shipment	Available now
sa23581	Essential Splice Site	Available for shipment	Available now

Mutation Details

Allele Name:

sa36898

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000102807	Nonsense	334	429	8	11
ENSDART00000111982	Nonsense	343	414	9	11
ENSDART00000131865	Nonsense	27	122	2	5

Genomic Location (Zv9):

Chromosome 19 (position 42006407)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	41458661
GRCz11	19	41045781

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

ACTGTATTTGCTCTGTCAGCATTCAGCTGGTTCACCACAGCTCCATTCAG[A/T]AGTCCACTAAGGAGCTCCGCGGGATGTCGAAGAACCGGGAGATTTCGTGG

Long Flanking Sequence:

GGGAAATGTTCACAGTATTTCCTATAATTTTTTTCTTCTGGAGAAAGTCTTATTTGTTTTATTTCGGCTAGAATAAAAGCAGTCTTTAATTTTTTTATGAAACATTTTAAGGTCAGTATTATTAGCCCCTTAAGCTATATTTTTTCCTATTGTCTACAGAACAAACCGCTGTTATACAATAACTTGCCCTAACTTACCTAATTACCCTAGTTACGCCTTTAAATTTAACTTTAAGCTGAATACTAGCATCCTAAAAATATGTAGTGAAAATTATTTAATGTCATCAGGGCAGTACATAATACTAATACTAATAATTTGTTATTAAAAATGAGTTATTAAAACTATTGTGTTTAGAAATGTGTTGATCAAATCTTCTTTCTGTCATACAGAAATTGGGAAAAAATATACAGGGGGGCTAATAATTCAGGAGGGCTAATAATTCTGTCTTCAACTGTATTTGCTCTGTCAGCATTCAGCTGGTTCACCACAGCTCCATTCAG[A/T]AGTCCACTAAGGAGCTCCGCGGGATGTCGAAGAACCGGGAGATTTCGTGGCCTCTCTCCACACTGCCAGTTTTCCATCCTGTGAGCGGAGAGGTGGTGCCGCCGATCCATCCTGACAACTACGAGACCACTAGCATGCCACTTATGCAGACGCAGACGTGAGTATCATTCTTCTGCTTTATTCATGGGTTCTGGGTGGAGAACGGGGTTCCATATAGAAAATTGATCTATGGACGTATATCCACACGACATGCTAGTTTATATTTGGATTTCACATTTATCAAGTATATATATATATATATAGTATATGTATATACATTTATCAAGTATATATGTTTCAAAATATGGCAAAAATGGCTTTATAGGTATTTTTTTTCAACAATTGGAATTTGCAATATCACACGGGTAGCAGTGTGCTATGGCTGTAAATCAGCACTGGTGGGAGGTGTGCATTGGCGGCCGAGTGTCTTAGCGTCTCACCAGTGCTGATATACAGCCATA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa23581

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

T > G

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000102807	Essential Splice Site	401	429	9	11
ENSDART00000111982	Essential Splice Site	410	414	10	11
ENSDART00000131865	Essential Splice Site	94	122	3	5

Genomic Location (Zv9):

Chromosome 19 (position 42002553)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	41454807
GRCz11	19	41041927

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TACAGAAATTTACAGAATCAGATCCAAATACCACAGCAGCAGACTTCTGG[T/G]AAGTGTATCATCATTTATATTAGATTAGGTCAGATTAGATTAGATTAAGA

Long Flanking Sequence:

AAATAGCCTATACAGTAGCTGTAAATACTCTGCTACTTGCAAATAAAAATAAACAATAAAACAAAGCAATATAATTTCTTCATTAATCATTAAAAACTTGTTAACAAGCTGTATTATCATTGTAAACTTGTTAAGTGCAATGAGGATCCATTTTGCAAAGTAGAATTAAAGAAATAAAAGACAACTAAAATAAAAGTACAAACATAAATACAAATAAGTCGGCCTAAATAAATAAATAAAGCAGAGTTTCACGCTAAACATAGAGAGATGTACAGTGTTGGTTATTTTAAAGTCAAAGGACTAAGACAGTCAAAAAATAAGCTTTTTCATTTACAAGAAAGCTGAATTCTGTTTTGCAAGAACACAACTGAATGTCACACTGGTGTTTTTTGTTCAGGATGAATCCCCTGAATGAGTGCTAATAATCGTGACCAACATTTTGTGTTTATTTACAGAAATTTACAGAATCAGATCCAAATACCACAGCAGCAGACTTCTGG[T/G]AAGTGTATCATCATTTATATTAGATTAGGTCAGATTAGATTAGATTAAGAAGCTTTTCATCCCATTGATATGAACAACACCTTCTGGTACGGGAGTAGCCTGAAGCATTTTCACCTGGTCAAAGCAAGGAGACATTTACACCTGGTCACTTCATGTGTTTTCTCTGACTGGACAGCTGATTTGTGAAAACATTTCCATTTACACTCGAGCACATACATTTGTGTCCATCAAACAGATATAATTCAACTTTCGCACTATATGCTAATTTAACAAGGTTACACTGAATAACGCATCAGATTTTCTTTAAGATATATTTTTGGCTTTTATTTAGGTAAGACAGTAATGAGACAGGAAGTGAAGCGGGAGAGAGAGAGAGAGGGGGGGATAGGGGCGGGAAGTAGAGATCTGCGCGGGACTAAATTTTGAATCCCGCTCCCGCCCACACCCGCCAGGTTTTAGCCCGAACCCGACCGCTCCCGCCTATATTACAGTTTTTCTCA

Associated Phenotype:

Not determined