Busch Lab

ZMP

thbs3b

Ensembl ID:
ENSDARG00000012060
ZFIN ID:
ZDB-GENE-060503-84
Description:
Thrombospondin-3b [Source:UniProtKB/Swiss-Prot;Acc:Q1L8P7]
Human Orthologue:
THBS3
Human Description:
thrombospondin 3 [Source:HGNC Symbol;Acc:11787]
Mouse Orthologue:
Thbs3
Mouse Description:
thrombospondin 3 Gene [Source:MGI Symbol;Acc:MGI:98739]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa43283 Nonsense Mutation detected in F1 DNA Not yet available
sa17980 Nonsense Available for shipment Available now
sa13482 Nonsense Available for shipment Available now
sa23526 Nonsense Available for shipment Available now
sa29208 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa43283
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000043133 Nonsense 434 906 12 22
ENSDART00000090825 Nonsense 457 929 13 23
Genomic Location (Zv9):
Chromosome 19 (position 24915467)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 24845579
GRCz11 19 24429802
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATTTTAATATCTGTTGTTAATTCTAACTCTTCCATGTGCAGGATAATTG[T/A]GCAAACACTCCAAACTCTGGGCAGGAGGATACAGATGGAGATGGCATTGG
Long Flanking Sequence:
CGGTACATTACATTACATCCTCTTGACTTCAAGCATGGAATTTACAAAGAATGCGTGGTCAATTTATCTGCACAAAAATTGCCTAATGTATCCTCCATTCCACTGTCTGCTTCAGTATTATTCAATCAAAAATGTACTGGTTATAATATTCCTTTATCATCTGATGAAATAATGAAATCTTAATTGATACAATATGTGCAAATGTTTTCTTTAATTGTGCATTTGCTTAAGTGTGCATTTGCTTAATTTAATCTGCATGTAACAGCACTGCACCAGACCAAACAACATTTTGTTTGAGTTGGACTGCAAGTAGTTAGAAAATAGGACACAGAATTTGACTCTAAAAAGTGAAACAGTTGATTATTTGATTTTTCTAATTTGATTGTATTCAATATATACAAACCTTTCAGCTTAGCTGATGACAGCATGGTGTTTCTTTATAAAAACATGTATTTTAATATCTGTTGTTAATTCTAACTCTTCCATGTGCAGGATAATTG[T/A]GCAAACACTCCAAACTCTGGGCAGGAGGATACAGATGGAGATGGCATTGGTGATCAGTGTGACGAGGATGCAGATGGAGATGGAATTAAAAACGTTGAGGTATCTGATCAAGTAGCAATGATTTGTTAAATGATTTGAAAAATTATAAGATATACCAGTATTTTCAAATCGGCTGATGTATTTGAAAAATTAGTTTTCAGTATTTTCCTATGCAGAAAAATATGAACATAAAGTTAACAATTAAAAACATATGTACAATATTCTAATTCTAACAGCTGAAAAGTACTTATAAATGTAAAAGATATGTAAATGGCTATTTTTACAATATTTTGAAATTTATGTTGCAAATATGCACATATACAGTATATGACATCTTTACACACTACCTGACAAAGTCTTGTCGTCAATTACAGTTGTAAGAGCAACAATTAATAACTTGATTTCTAGTAGATCATTTGGAAAAGTGGCAGATGGTAGATTTTTGATGAATCATCTGTTGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17980
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000043133 Nonsense 501 906 13 22
ENSDART00000090825 Nonsense 524 929 14 23
Genomic Location (Zv9):
Chromosome 19 (position 24913924)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 24844036
GRCz11 19 24428259
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACTCCTATGGTGATGCTTGCGACAACTGCCCCAACGTACCCAACGGCGAT[C/T]AGCTTGATACTGATGGCAATGGCAAGGGAGACATCTGTGACACTGATATT
Long Flanking Sequence:
TGAACCATGACTTTATATTCTATACTGTACGTTATTTCTGTTAAGTGACAAGACTTTTTTCTAAGCAAAGTCAGACCTTACTTAATGCCTAAATAAATAATTAAAAATCAAGGCATAATCATATTTTATTTTGGTAAAATAAGCTTAAGCTTGCCTTTCATATAAGCCACTTCTGATCAACTAGAAGTAAAGTTATCATTTAATGTTCCTAAAACTTGGATAGGTGACAAGACTTTTGTCAGGTAGTGTATATGTGAAATCTATACATTAACTTGTATGTGAGATGAGATGTGAGACTTGTATGTGAGATTAATATGTGATATGATTTTCACCTATTGTCATAAATCAGACTTTTATATTGGTTTAAATGAATTGCCCTTAGCTTATATATCATTTTCCAGGACAACTGTCGTCTGGTGCCCAACAAGGACCAGCAGAACTCTGACACAGACTCCTATGGTGATGCTTGCGACAACTGCCCCAACGTACCCAACGGCGAT[C/T]AGCTTGATACTGATGGCAATGGCAAGGGAGACATCTGTGACACTGATATTGATGGAGATGGTACAGTCCCATTTAACTGTTCTGTGGTTTTACAGCATTGTTCTGCTGCATCATCTGTCTTTACCACTGATTTTCTTTACAGGGATCCCTAACGTTTTGGATAACTGTCCTAAAATACCCAACCCCATGCAGACAGACCGAGATGGAGATGGTGTGGGGGATGCATGTGACAGCTGTCCTGAGGTCAACGACCCACTGCAGGTTAGACAAAGATAACAAGTTAAAACTATAGGGAAGAGAAGAACGGGGACTATCTAGTGATACAACCAAAGCTCCATCATCAAGATTTAGATTTCTAAAAAGGCAAGCTGAGATAGTGGGGTCATCCAAAACAATAAAACTGCTGCCATCTGTGTAGAAGCTACAGGAGAAGTGTGTTTTTATGATTCACTAATATAGAAAAGAGAAGAGGTCTAAGCACCAAACCTTGATGCACCCAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13482
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000043133 Nonsense 526 906 14 22
ENSDART00000090825 Nonsense 549 929 15 23
Genomic Location (Zv9):
Chromosome 19 (position 24913766)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 24843878
GRCz11 19 24428101
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCATCATCTGTCTTTACCACTGATTTTCTTTACAGGGATCCCTAACGTTT[T/A]RGATAACTGTCCTAAAATACCCAACCCCATGCAGACAGACCGAGATGGAG
Long Flanking Sequence:
CATATAAGCCACTTCTGATCAACTAGAAGTAAAGTTATCATTTAATGTTCCTAAAACTTGGATAGGTGACAAGACTTTTGTCAGGTAGTGTATATGTGAAATCTATACATTAACTTGTATGTGAGATGAGATGTGAGACTTGTATGTGAGATTAATATGTGATATGATTTTCACCTATTGTCATAAATCAGACTTTTATATTGGTTTAAATGAATTGCCCTTAGCTTATATATCATTTTCCAGGACAACTGTCGTCTGGTGCCCAACAAGGACCAGCAGAACTCTGACACAGACTCCTATGGTGATGCTTGCGACAACTGCCCCAACGTACCCAACGGCGATCAGCTTGATACTGATGGCAATGGCAAGGGAGACATCTGTGACACTGATATTGATGGAGATGGTACAGTCCCATTTAACTGTTCTGTGGTTTTACAGCATTGTTCTGCTGCATCATCTGTCTTTACCACTGATTTTCTTTACAGGGATCCCTAACGTTT[T/A]GGATAACTGTCCTAAAATACCCAACCCCATGCAGACAGACCGAGATGGAGATGGTGTGGGGGATGCATGTGACAGCTGTCCTGAGGTCAACGACCCACTGCAGGTTAGACAAAGATAACAAGTTAAAACTATAGGGAAGAGAAGAACGGGGACTATCTAGTGATACAACCAAAGCTCCATCATCAAGATTTAGATTTCTAAAAAGGCAAGCTGAGATAGTGGGGTCATCCAAAACAATAAAACTGCTGCCATCTGTGTAGAAGCTACAGGAGAAGTGTGTTTTTATGATTCACTAATATAGAAAAGAGAAGAGGTCTAAGCACCAAACCTTGATGCACCCAATAATCGATTTTACATCACACACTTATTTTTCAGATTACCTTACAAAATATGTTGTGTGTGTACATTTATACAAAATAGTGATAGGAAGATAATATAGCTAGCTTCTTTGAAACGGTAGAAAATCTTGGTTAATTTCCTTTAGTTTAGCCAAGTTTAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23526
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000043133 Nonsense 583 906 16 22
ENSDART00000090825 Nonsense 606 929 17 23
Genomic Location (Zv9):
Chromosome 19 (position 24911309)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 24841421
GRCz11 19 24425644
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTAAAGCTCTAATGAAAATGACTGTCTGTGTGTAGTGATGGTGATGGATA[T/A]CAGGACACCAGGGATAACTGTCCTGAAGTGCCCAACAGTTCTCAGCTGGA
Long Flanking Sequence:
CGATTTCCAACCAGCTCACAGTAAATCATTACATCCCTATTGTGAACAAATAGTGGCACCTAAGCCAATAAAGGATCTTGCCTCTCAAGTAATAACACAGTAATTCATTTTTAAAATTTTGCTTATTTGCAGTCAGACATGGACAATGATCTGGTGGGAGATGTATGTGATACAAACAAGGACATGTAAGTATATGTTTAAATAAAAGCTTATTTTATGCAACAACAGACAAAAGGACCTTTATAGTTCTATAATCGCAGTAACGGAAGTCCACTGTCAATAGCTATTCATGAAGCTCTAATTACTCAGAGATCATCTGCAAACCAAGTTGTTTTTTAATGGTAAATCTGACAGCTTCACATTTTTGAAAGATAAAGTTAGTTTTGATTTAGCATATATCACTTTTTTCATATCTGCTCTGGTTTGTGGTTTCTGCTAGTACAATGTTGTGTAAAGCTCTAATGAAAATGACTGTCTGTGTGTAGTGATGGTGATGGATA[T/A]CAGGACACCAGGGATAACTGTCCTGAAGTGCCCAACAGTTCTCAGCTGGACTCTGATAATGACGGCATCGGGGACGAATGTGACGATGATGATGATAATGATGGCATCCCGGATATTCTCCCTCCAGGCCCAGATAACTGCAGACTCGTTCCCAACCCCAGTCAAATAGACACTGATGGTGTGCTCTTTCATTTTACATTTCAAATATATTTGAATACTACTAATATACATATAATGTGTGTATTAGTGTAATATTTACAGACTGTGGTCATGCATTTACAATAATTAGCATAGTGAATCTAGCTGTTGGTTATTTGTAAATGTATTTTAGTTTTAAGAATCATTTTCAATTTTAACATTATACCTTCACAGTCTAGAGGTTAACATCTTTGTTTTTGACTTTCTCTCCTGTCAGCCAATGGAGTTGGTGACGTGTGTGAAACTGACTTCGACAATGATAAAGTGACTGACCTGTTAGATGCGTGTCCTGAAAGCGCAGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa29208
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000043133 Nonsense 762 906 19 22
ENSDART00000090825 Nonsense 785 929 20 23
Genomic Location (Zv9):
Chromosome 19 (position 24908533)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 24838645
GRCz11 19 24422868
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCATCTTTGGCTATCAGGACTCATCCAGCTTCTATGTGGTGATGTGGAAA[C/T]AGACAGAACAGACGTACTGGCAGAATTTACCATTCAAAGCCTTGGCTCAG
Long Flanking Sequence:
ACGTACATCACACAAAATGCAGATCTACTTTGCATGTACGTATGTAAAAAACAATAATTACAAAGAATTGGCAAGTAAAATTGAACTAAACCAAAACATTTTAAGATGTAAAAGTATTTTTGTGTAAAACATACAAATAATAACAAAACTAGTGAAAATAAACTGTATATAGTACATATTTTTTATCTTTTTCATTTCACATGTGATGCATGGAGATTTTAAATTGATTTTATGTAGTTTTGTAGGCAAAACTGTTGCTTTTAAATGTGCTATAGAAAGTCATTTTGACTTGACTCTGTAGTGTACTAAAAGGTTTTTTATAAGTACACCTTAAACTTCTTTTTAACGTCATTTTTCTTGTTTATTATTTAGGCTACACAGCATTTAATGGTGTTGATTTTGAGGGCACGATCCATGTGAACACAGCCACTGATGATGATTACGTGGGCTTCATCTTTGGCTATCAGGACTCATCCAGCTTCTATGTGGTGATGTGGAAA[C/T]AGACAGAACAGACGTACTGGCAGAATTTACCATTCAAAGCCTTGGCTCAGCCTGGAATACAGCTGAAGGTGAGAGTACAGGAATAAAGTAAAAATAAAGTGCTACAGCCATGATGTCAACAAAACAAAGGCTGATTTGTCACTAGTTCCATTGGGATTTTTACATGTATGAGTAAAGAACTGGTTAATGTAACTATGATACTTGGACATTTCCATTGCAGTGGAAACTGTATGCACTCAAAACATTCTCACGTAGTAAAACAGGCATTTATAAAATAAACTTAAAAGCTTTAAATGTGTGTTATAGACATAAATTGGTGTAATTTATGTTGTAAAGCAACACATCTGGTTATTATTGAAACGTTGTTTACCACAAAATAAATTAAATTCATAGAATATTCTGAGGGAACCACTGGTGATTTCCTTTAAAGTCAATGTTGCAGCTCTCAAAGTAAAGTTAGAGCTGTTGATTTAAGGGTGCTATGCAAATTATTCAGTCAA
Associated Phenotype:
Not determined