Busch Lab

ZMP

lrrc50

Ensembl ID:
ENSDARG00000012030
ZFIN ID:
ZDB-GENE-031114-4
Description:
Leucine-rich repeat-containing protein 50 [Source:UniProtKB/Swiss-Prot;Acc:Q7ZV84]
Human Orthologue:
LRRC50
Human Description:
leucine rich repeat containing 50 [Source:HGNC Symbol;Acc:30539]
Mouse Orthologue:
Lrrc50
Mouse Description:
leucine rich repeat containing 50 Gene [Source:MGI Symbol;Acc:MGI:1915520]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa20957 Nonsense Available for shipment Available now
sa40903 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa20957
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000099272 Nonsense 76 548 3 11
ENSDART00000145762 Nonsense 80 562 3 10
Genomic Location (Zv9):
Chromosome 7 (position 30350084)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 28742426
GRCz11 7 29013576
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGCAAGAAAAACAAACTGTACCTGACACCAAGGCTGAATGACACACTTTA[T/A]CTTCACTTTAAAGGTTTGAAATTGCTTAAACAAAAGAGACTAATTTTGCA
Long Flanking Sequence:
TTTAACTGATAGAGAGGTGTATCTGTTCACATATTTAAAAACTTGCATTATTTACAGTGCTATTTGAAAGTGCGTAGCCAAAGCTGAAGGATATGATTTTTTTCCACAGGAAAATATACAAGAGAAAAAGAGTACTGCAGATAAATATATGTACTCCTTTTACCCATTATTTGACAAAAAGGAAAGAAAAATGTAGTCTTATTTTATAGCTTTTCATGTAAAATGCCTAATGGAGAAATATTTTTCCTTTGAAAGATCTGGATTCTCAGAGTGCAGCTGCTGAAGTGTCAGAGAGTGACATAAAGCCTTCAGGCCCCAGGTGATGAAGTGCAGTTTTTTTAATAGTATCCAAATGACATTTGCTCAGATTCAGTTGCTTGAGAATAAAAAATACTGATTTATGTTTCCTGTATCCTCTTCAGAATTACCAAAGACTTCTTAAGGGAGCACTGCAAGAAAAACAAACTGTACCTGACACCAAGGCTGAATGACACACTTTA[T/A]CTTCACTTTAAAGGTTTGAAATTGCTTAAACAAAAGAGACTAATTTTGCATCTTCATCTTTCTTTTCAACTTTTTTAATGAAACTGTTAATTCTCCATTGTAGGTTTTTCTTGTATAGAGGGTTTGGAAGAATATACTGGCCTGCGCTGCCTATGGCTCGAGTGTAATGGTATTCGAAAGATTGAAAATCTGGAGAATCAGACAGAGCTTCGCTGTCTGTTCCTCCATCAGAATCTCATTCACACTCTGGAAAACCTGGAACCACTCAGCAAGCTTTGCACGCTTAATGTCTCAAACAATTATATCAAGGTCATTGAGAACATTTGTAAGTACTTAACTCATTGTCAAACTTTGGCCCCAGTCTTTCATTCTCATTTATTTACACATTAAGGTTTTGTTTTTCAGCTAGTTTGAGCGACTTGTCCACTCTACAGATCTCTCATAACACACTGGAGAATGTTTGTGACATGGAGGAGCTTTCACACTGTCCATCCATCAGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa40903
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000099272 Nonsense 98 548 4 11
ENSDART00000145762 Nonsense 102 562 4 10
Genomic Location (Zv9):
Chromosome 7 (position 30350239)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 28742581
GRCz11 7 29013731
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTTCTTGTATAGAGGGTTTGGAAGAATATACTGGCCTGCGCTGCCTAT[G/A]GCTCGAGTGTAATGGTATTCGAAAGATTGAAAATCTGGAGAATCAGACAG
Long Flanking Sequence:
CCTTTTACCCATTATTTGACAAAAAGGAAAGAAAAATGTAGTCTTATTTTATAGCTTTTCATGTAAAATGCCTAATGGAGAAATATTTTTCCTTTGAAAGATCTGGATTCTCAGAGTGCAGCTGCTGAAGTGTCAGAGAGTGACATAAAGCCTTCAGGCCCCAGGTGATGAAGTGCAGTTTTTTTAATAGTATCCAAATGACATTTGCTCAGATTCAGTTGCTTGAGAATAAAAAATACTGATTTATGTTTCCTGTATCCTCTTCAGAATTACCAAAGACTTCTTAAGGGAGCACTGCAAGAAAAACAAACTGTACCTGACACCAAGGCTGAATGACACACTTTATCTTCACTTTAAAGGTTTGAAATTGCTTAAACAAAAGAGACTAATTTTGCATCTTCATCTTTCTTTTCAACTTTTTTAATGAAACTGTTAATTCTCCATTGTAGGTTTTTCTTGTATAGAGGGTTTGGAAGAATATACTGGCCTGCGCTGCCTAT[G/A]GCTCGAGTGTAATGGTATTCGAAAGATTGAAAATCTGGAGAATCAGACAGAGCTTCGCTGTCTGTTCCTCCATCAGAATCTCATTCACACTCTGGAAAACCTGGAACCACTCAGCAAGCTTTGCACGCTTAATGTCTCAAACAATTATATCAAGGTCATTGAGAACATTTGTAAGTACTTAACTCATTGTCAAACTTTGGCCCCAGTCTTTCATTCTCATTTATTTACACATTAAGGTTTTGTTTTTCAGCTAGTTTGAGCGACTTGTCCACTCTACAGATCTCTCATAACACACTGGAGAATGTTTGTGACATGGAGGAGCTTTCACACTGTCCATCCATCAGTGTCCTTGATCTGTCCCACAACCGCATCAGTGATCCAGCGCTAGTTAATATTCTAGAGAAAATGCCTGACTTGGTAAATTACAGTGCATTTCTTTCCTCATTTATGCTTTCTTGTAAATTTTGATTAATTTGCTAGTTAATATATGTTTGCTTGAT
Associated Phenotype:
Not determined