Busch Lab

ZMP

zgc:56556

Ensembl ID:
ENSDARG00000011723
ZFIN ID:
ZDB-GENE-040426-1078
Description:
UPF0489 protein C5orf22 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q7SZF1]
Human Orthologue:
C5orf22
Human Description:
chromosome 5 open reading frame 22 [Source:HGNC Symbol;Acc:25639]
Mouse Orthologue:
6030458C11Rik
Mouse Description:
RIKEN cDNA 6030458C11 gene Gene [Source:MGI Symbol;Acc:MGI:1925127]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa11848 Essential Splice Site Available for shipment Available now
sa12758 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa11848
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000020367 Essential Splice Site 344 439 None 9

The following transcripts of ENSDARG00000011723 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 28134195)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 28310680
GRCz11 2 27966316
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACTTGTRCACAGTCTTAAGAATCGACCATCACCTCCGGACTATGAAATGG[T/G]GTGTTTGTTTTATATTTTAGTGGATATTTTAATCATGCTTTTAGTGTATG
Long Flanking Sequence:
GAAGAAAATTAGATGGATGGGTCAAGGAAATTCAGCTTTTCAGGAGAAAGCCGGGGAATTTGACATTTGGCTTAGAGTGGGAGTCCTGCAAATAACAGTCTTTACACATCCATGTGTGTTTGGTTTTCAGGAGGAGCTTTTAGAATGTGTGGAGAGACGCACGCGTCAGCTTGAAGACCTGGAGGCTGCGTTCGCTGACCTGCTTGAGGATGACGGCCAGGAAACTGTTGAACGTTTAGCAGCAAACCCAGGGTACACGTTACTGCTGTCACTGACACTGTGTTTTGTGTTTTTTTTTTTTTATTATTATGGCTTCATATCAGTACACCACTGGCCTTGATTTATTACTGTACATTGTCCGTGTTCATTTGATCAAGCAGAAGATGGCATGGCTTAATGCATTGATTTTTTTTTTTTTCATTTTCTTTGCAGAATGAAATCTCTTTTCGGACTTGTACACAGTCTTAAGAATCGACCATCACCTCCGGACTATGAAATGG[T/G]GTGTTTGTTTTATATTTTAGTGGATATTTTAATCATGCTTTTAGTGTATGTCATTTCATATATCCCAAATAGTGTCTTTTTCTTTATTTTATTTGAAGAAGAAAAATAGTATCTATAACTTCAGTGACCTCTTGTTTAACCTTCATATTCTTTTAATAAGTTCCTCTGAAATAATCAGAACTCAGCCGGCAGCTGATATTGAATCTTTATCCCTCTTTTACAGTAGAGTACACATTCATTTTTCAGACATTTACCTCACATCTATTCTAGTCACGTTGTTTCAGCTTGGGGCCAATTTGACACTGAACAATGTTGAAAAATACACTAAAAGAAATGAGAATAAGCATCTGTTGGGAGTGTATTGCTACATGTAAACAAATTAGAATTTTAGGAATTAGTTCATTTTATGAACTATTAACATAAAACTAGTAACAGGCATGCTTTAAAGTTTGAAGTTAACAAATCATAATCATCAAAGTTTATAAAGCTAAGAATATTGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12758
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000020367 Nonsense 397 439 9 9

The following transcripts of ENSDARG00000011723 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 28125976)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 28302461
GRCz11 2 27958097
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTGTTTCCTGAACTTCTATTTGTTCTTGTCAGATCCAGTTTGGATGAGTA[T/A]TGTCCAGCTGAACAAGTGGATTCCATCCAGATCAGARTGCTGAAYATTCT
Long Flanking Sequence:
GCAGATTCTGTTTTTCTAGTGTATTCAGCACTGAACTCCACTGTTATAAATGTCATTGTTTGTTTTTATTGCAATAAGTTATCATTAAAAAAGTTATACTGATTGGTTAATATTCTTTAAAATAATGTTTTCTATTTATTTTGAAATGTTAAATAGGCCTAAATTACAAAAATAACCATGGCAACATTAATTAAATATAGTTTGGTATATTTACCTTCGGCTCTTAATGACATTTATTTTTTGGCCCTTCATACGAAAAAGTTTGGGCACCCCTGCACTAAAGCATATCATATTTACCTTTTGTTACCTTCCACTTCATTATCAGTTTTTCATATACTGTTTCAATGACTCACATTTGGTGCTTGGTGAGCATTTATTTTATGCTCTATACGGTTCAATATAAACGTTTTCAGTTGTAATAAAATCAGAAAAGTATGTAGTAGTATCAAGGTGTTTCCTGAACTTCTATTTGTTCTTGTCAGATCCAGTTTGGATGAGTA[T/A]TGTCCAGCTGAACAAGTGGATTCCATCCAGATCAGAGTGCTGAACATTCTAGAGTCCCTCTTCGGCTGCTTAGATGTTCACAGAGATTACGAATCAATACCAGCAGAGAGCACATCACACACCGCATGAGGAGAGAGGTTAAATTCATCATCAGCTGCAGCATCTTTTTTTTTTTCAATGACTGTTTTCAGATGCTGAACCATGCTAAGATTTGCCCTGCACTATTTTGCGGTTGAGTGCATATCTCACAACGAATGTATGGATGTGAATGGAAAAGAAAATTAATTTCCAGCTGGGAAATGGGCTTTTAATTCAAGAGGTTTTCGTGTATATGTTTGAAGTGCATTCATTCATAATACGAGCCCCTGCCACTGTAGAGTGGATATACTGGAAAACCTTGGTAATAATGTATCTGTATTGTCGCCAGAACAACAAAATAAAAAGCCCAAGATTTCCATATGAATTCTGTGCTGCAGTCATTCATCCCCAATGCATTCAGG
Associated Phenotype:
Not determined