ZMP
calcrla
Ensembl ID:
ZFIN ID:
Description:
Calcitonin gene-related peptide type 1 receptor [Source:UniProtKB/Swiss-Prot;Acc:Q68EK2]
Human Orthologue:
CALCRL
Human Description:
calcitonin receptor-like [Source:HGNC Symbol;Acc:16709]
Mouse Orthologue:
Calcrl
Mouse Description:
calcitonin receptor-like Gene [Source:MGI Symbol;Acc:MGI:1926944]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa34724 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa41507 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa41506 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa34724
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000024583 | Nonsense | 94 | 470 | 4 | 13 |
| ENSDART00000123193 | Nonsense | 98 | 474 | 3 | 12 |
| ENSDART00000144353 | Nonsense | 98 | 474 | 4 | 13 |
Genomic Location (Zv9):
Chromosome 9 (position 43443862)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 42569032 |
| GRCz11 | 9 | 42370819 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGGATGGATGGTTGTGTTGGGATGACACTGAGGCAGGCATCACCTCTGAG[C/T]AACACTGTCCTGACTATTTCCAGGATTTTGACCCTACAGGTTAATATTAG
Long Flanking Sequence:
ACAGCACTGCGCCAATGCATCGCCCTGTATAACATTTATAATTCAATGTATTTTTTTAATAAGCCTGACAAAAAAAAGTGTATACCACTGCAAACGGAGACATATTAGTTTTTGTCATTCTGTCTAATTAGCACAGCAAGAACACATAAAGCCTCAGGTGACTCATATTGTTAGGAAGAGTGTATTCTGCAGGACAGCGGTGAGAAATCACCTCAGTTCCAAAACCTAGTGTGCTTCCTACTTGGCATCCTAAATGAAGCCCAATGACTGATTTAGAACTTTCTCCGTAGTCTGCAGCACATAAATAGCACATGTGGGATTGGGCTTTTGAAACAGTTTGAACTAAGAATAGTGATGATGAAAATAAGAGGATGTTTCTCAGTTTCCATCGAAACCAATACATGTTTTGGGTTATTTCCATGTTTACAGGCCCGGTGTGTAACAGGACGTGGGATGGATGGTTGTGTTGGGATGACACTGAGGCAGGCATCACCTCTGAG[C/T]AACACTGTCCTGACTATTTCCAGGATTTTGACCCTACAGGTTAATATTAGGTTGCTTTCACCTGTACAAGGTTCAGTCTGCGGGCTTTCTGCACAGCTTAATACACTTATTCCATCGTACGTGTTCTCATTTTTTTCCACTCTATTACCCTCCACTGTCAAATCATGCAGAAATCAGAGGCAAAAAAGGCTATTAAAATTTTTATAACACACTTTCTGCTCTGAAGAGAGATAAGTGGAAGATTTTATATTCAATATTAAAGACATTTTTCAGGTACCGCTGATTTAGCAGTAGAGTTATGATTTGAATAATTTATAAAGTAAAATTTAAAAAGTGCTTAGAAAAATGGTGATAATATATTATTAGTGCACATAATGCTCTAATTTTTAGTTAGTGAGTGTTGTTTAATTATTTATTTATATTATTTATAAAGTGTTGTTTAAATATTTTATGTTAATATTAATATAAAGCCTAACACAAAAATAGATAATGGATCTGCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa41507
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000024583 | Essential Splice Site | 384 | 470 | 11 | 13 |
| ENSDART00000123193 | Essential Splice Site | 388 | 474 | 10 | 12 |
| ENSDART00000144353 | Essential Splice Site | 388 | 474 | 11 | 13 |
Genomic Location (Zv9):
Chromosome 9 (position 43439508)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 42564678 |
| GRCz11 | 9 | 42366465 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCTGCTGAAATATACGACTACATCATGCATATCCTTATGCATTATCAGG[T/G]AAAAAGCTGTCAAATAAGCATAAATTTTAACAATAGAACTACAGAGGCAG
Long Flanking Sequence:
TGCAGCAATGCTGGTAAGACATCTGGAAGGTTTTCTCCAGTTCATTTTCATTTTTAAAACGCATTCTTTCTGTGCACCATTAATTACAATCTTTGTGTATTGTTTGCGTAAATTACATCCAGAAGTCTGAATTGATTGTTGAGTAGCCTAGCACAATGTTTATATGCATCAGCACATCAAAAGAACAGTTACCTTCATCTGACAGAGACTCTCTTCTGACATCTGCCAGCCAGCTGGGTTTTGTGTTTGGGTCTATCACTCATCTTGCCTGTCCTTCCAGGTGAACTTGTTCTTTCTGCTGAACATCGTACGAGTCCTCATCACCAAACTGAAAGTAACACACCAAGCAGAGTCTAGTCTGTATATGAAAGCTGTTCGTGCGACCCTCATTCTGGTTCCCCTCCTGGGCATTCAGTATGTCCTGCTTCCTTACAAACCTTCTGGACGCGTCTCTGCTGAAATATACGACTACATCATGCATATCCTTATGCATTATCAGG[T/G]AAAAAGCTGTCAAATAAGCATAAATTTTAACAATAGAACTACAGAGGCAGCCTTTTTGATCTTGTTTTTTTATTTTGTAATTTAATAACTATGGTAAAATTAAACCCATATAAATATAGAATCAAGACTCTTCCTAAATATGTGCATATTTTATTCTAACGTTGTTAAAACACAACCAAATTCAGAGTATTTCTATCTCAAATGGCCAAAACGGTCAAATTGACTGCATGTGCTACTCTTTTAATATACATGCCTTTGTAGCATAGCATTATTCTGCTAACATAAATATGACTTTCTGATAGAAAAAACATAACTTCAGACATATCAGTCAAACGTACAAAAACTACACTCCCCCACTTAAAAATATGCACTTTCAGATGTGGTCTGGAAACTCAAAATGATAATTTTTGCATGCAAAATTATAGGACATATTATAAAAAAAAAAATTGGTTATGTTAGAGAAAACTATATTAGACTTAGTATATAAATATAAAAAGACA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa41506
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000024583 | Essential Splice Site | 399 | 470 | None | 13 |
| ENSDART00000123193 | Essential Splice Site | 403 | 474 | None | 12 |
| ENSDART00000144353 | Essential Splice Site | 403 | 474 | None | 13 |
Genomic Location (Zv9):
Chromosome 9 (position 43434000)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 42559170 |
| GRCz11 | 9 | 42360957 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGTTGAAGGCTAATGCATTATTTATGCTGACTGAAATCCTGCCTTCCTC[A/G]GGTCCAGGCGGTTTTGAGAAGGCACTGGAATCAGTACCGTATTCAGTTTG
Long Flanking Sequence:
TGTGAAAGTGAGAGTGTATGGGTGTTTCCCAGTACTGGGTTGTGGCTGGAAGGGCATCTGCTGCGTAAAACATATGCTGAAATAGTTGGCGGTTCATTCCGCTGCGGTGACCCTTAATGAATAAGGGACTAAGCTGAAGGAAAATGAATAAATGAATGTATTTACACTAACATAATTGACATGACGTAGAGGAAACAATGGTGTTTAAACGTATTATTCAGCCATATCCAGATATTTATTCTATGACACCTTTACATTCTCTCCCCCCAGAAAATGTGCCTCTGTGATAGGAAAACAAATGCAATAACTTCACATGCATTTTCATCATAAATTTTTCACAATGTGTCTTTAGTAAATCCTGACAGTAATGTTAAAAGATTGTTTGTGCACAAGCTGTTAGTATGTCTGACCCATTATAACTACATTTGAAATCACTAACCTGGTTAACATTTGTTGAAGGCTAATGCATTATTTATGCTGACTGAAATCCTGCCTTCCTC[A/G]GGTCCAGGCGGTTTTGAGAAGGCACTGGAATCAGTACCGTATTCAGTTTGGAAGCACCATCACGCAATCTGATGCTCTGAGATCTGCTTCGTACACTGCATCCTCCATAACTGAGGTTCAGGGCTGTTACAGCATTGACGGACACACAGAACACTTGAATGGCAAAAACTACCATGACTTTGACAACGCCATAATAAAACCAGAGAATCCCTTGGCCTGATGCCACTCAACATGGCAATGTGATGCAGAATATACACAAGAAAAAAAAAAAAAAAAAACTGCCACATGACTGACGTGGACCTTTTTATCCATAGTGCATTGCTCATGCTCTCCGAGGGATGGAGTAAAGGCATTTCTCGTAAACTTTACACTGAAAAAACAAAACATTTTGCTACCTTTGTTTAATGTTAAATGTACAAACACATTATTGGCCTTGTCTTTGTATTTTGCAGTATTTTAGTTTGCTCAACTGCTGTTTGCAGTGGAATTAGTGTAAATAT
Associated Phenotype:
Not determined