Busch Lab

ZMP

nod2

Ensembl ID:
ENSDARG00000010756
ZFIN ID:
ZDB-GENE-061108-4
Description:
CARD15 [Source:UniProtKB/TrEMBL;Acc:Q1AMZ9]
Human Orthologue:
NOD2
Human Description:
nucleotide-binding oligomerization domain containing 2 [Source:HGNC Symbol;Acc:5331]
Mouse Orthologue:
Nod2
Mouse Description:
nucleotide-binding oligomerization domain containing 2 Gene [Source:MGI Symbol;Acc:MGI:2429397]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa21011 Nonsense Available for shipment Available now
sa10156 Nonsense Available for shipment Available now
sa18880 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa21011
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052380 Nonsense 79 970 1 10
Genomic Location (Zv9):
Chromosome 7 (position 38955148)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 37291788
GRCz11 7 37563046
KASP Assay ID:
2259-9172.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGCATGCAGTTATTTTTTGGCTGCGATTGAGCAAGAATTAGCTGAGGAG[C/T]AAAAGGCTGGACTATGTTTTGGTAATGGATGCGTTATGGTGGGCAAGGAC
Long Flanking Sequence:
TTGGCATCACAATAAATGTTAGAATGAGGAACATACGCCCACATTTACACGATAGGCTACCTGTTTGTGCTGATGTTTAAGAAATGTAATAATATCACAACATACTGTAACATCTGAGTCTGACATCTAATTTATGCCACAATATGATTCTTCAGTGAGAGGTTGTAATGTTTTCTGTCTCATCTTTTTAGTTGAGTTCTGTTGTGACTGGGCTATGAGGCGAGATTCAGTTCACTATGAACGCTCAACAGTTGATCCTCAAACAGCGAGCAGAGCTTCTGGCAGTTCTATGTGGTGGAGGTAGCGATGAACCTCTGGAGAGTGTTTTGGACCTGCTACTTGCTCAGGAAGTTCTTGTCTGGGAGGATTACCTTAGGGTACGAGTGGCAGAGAAACCCTTGTGTGCTAACATCAGGCAACTTTTAGATTTGGTGTATGACAAAGGAGAAGATGCATGCAGTTATTTTTTGGCTGCGATTGAGCAAGAATTAGCTGAGGAG[C/T]AAAAGGCTGGACTATGTTTTGGTAATGGATGCGTTATGGTGGGCAAGGACAGACCAGCCACTGCAACTTCAACATTACTGGCTGACAGGCCAATGTTAGTGAGACGGCTCAGAGATAATATTGATGGAGCACTAAATATTTTACTGACGACTGGTTGTTTCTCCATCAAAGATTGTGATAGTGTGCAGCTACCTGTATACACACCCTCACAACAGGTAATACCACCTTAAACTATGAGTTTGTTTTAATACACAAATAATGAAATTTCATGTGCCACATGACTATCTCAATATAATTTGCAGTGTATCTTTTCCTATTGTACTGAAATCATTTTGGCCTATGTAGCATGTTCATCGGGCCAGATTTATGAATGGACAATCAGTTTGTATGATCAAGGGGGCCCTGTTACAATGTGGAGAAATAAATAAATATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTAAAGACT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa10156
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052380 Nonsense 911 970 8 10
ENSDART00000052380 Nonsense 911 970 8 10
Genomic Location (Zv9):
Chromosome 7 (position 38948801)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 37285441
GRCz11 7 37556699
KASP Assay ID:
554-6143.1 (used for ordering genotyping assays)
KASP Sequence:
ATAATGGTGTGGGCAGTGCCGGTGCATGTGCTCTGGCTAAATTTATCCGA[C/T]AGAACAAAAGTCTGGAAGAATTGTGGTGAGTGSCTTCAGCTTTTTTTAGT
Long Flanking Sequence:
AGGCTTGGAAATAATAACATCACATCAGTTGGAGCAGAGCAGCTGGCAGAAGGCCTAAGCTACAACCAATCTTTACAGTTTCTGGGGTGAGGTCTATGAAAGGAATGAAATATTGTATGGTATTTTTATTTAATACCTATATTAAATCACAATTTCTTTTTACTTCTAGATTATGGGGTAATAAAGTTGGGGACAGGGGAGCTGAGGTATTGGCGGATGCGCTGACGAATAGCAAAACACTAATATGGTTAAGGTAATATTGTATATATTGATCATAAATCTGTATTCTGTAATGCATATGTTTTAACATATTTTGCAACATGCAAAATGATGATAAGCAAAGAAAAAAGGTTGCCTAGATCATATAAAATTTGCAGAGCCGTGAGTCACTCAGTGCAGCATGTTTTATTTTTTGTGGTGGTGTTGCGTTGGTTTGTTTCAGTCTGGTGGATAATGGTGTGGGCAGTGCCGGTGCATGTGCTCTGGCTAAATTTATCCGA[C/T]AGAACAAAAGTCTGGAAGAATTGTGGTGAGTGGCTTCAGCTTTTTTTAGTTTTCATTTTCTGAGTCAGACTAGGATGATCTAACTCTATTACTCCTAACCAGGTTAAACAAAAACTCCATCTGCAAGGAGGGGGTTGATTGTCTGATAGAGGCACTGAAAATGAACACTAGTGTTAAGAAAGTCTGGTAAGGATATTTCCCAGCATTTTAACTTACCATACACTGGTTTTTACTTTGAAAAAGTAATTGATTGAAATGTGGAGTTAGACTTTCAATTAGAATTTCACATTAAAACATTTACAGTTTTAATTTGGACTTTTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTAAATATTATATTATCCATGTCTATGGTTTGTGTTTTGAATAATATTATATCCTTACTACAAAGACTCTTTGCTTTGTGCTCTTAAAGGCTGAGAGGAAATAATCTGAGCCCACAGGAAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18880
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052380 Nonsense 911 970 8 10
ENSDART00000052380 Nonsense 911 970 8 10
Genomic Location (Zv9):
Chromosome 7 (position 38948801)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 37285441
GRCz11 7 37556699
KASP Assay ID:
554-6143.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATAATGGTGTGGGCAGTGCCGGTGCATGTGCTCTGGCTAAATTTATCCGA[C/T]AGAACAAAAGTCTGGAAGAATTGTGGTGAGTGGCTTCAGCTTTTTTTAGT
Long Flanking Sequence:
AGGCTTGGAAATAATAACATCACATCAGTTGGAGCAGAGCAGCTGGCAGAAGGCCTAAGCTACAACCAATCTTTACAGTTTCTGGGGTGAGGTCTATGAAAGGAATGAAATATTGTATGGTATTTTTATTTAATACCTATATTAAATCACAATTTCTTTTTACTTCTAGATTATGGGGTAATAAAGTTGGGGACAGGGGAGCTGAGGTATTGGCGGATGCGCTGACGAATAGCAAAACACTAATATGGTTAAGGTAATATTGTATATATTGATCATAAATCTGTATTCTGTAATGCATATGTTTTAACATATTTTGCAACATGCAAAATGATGATAAGCAAAGAAAAAAGGTTGCCTAGATCATATAAAATTTGCAGAGCCGTGAGTCACTCAGTGCAGCATGTTTTATTTTTTGTGGTGGTGTTGCGTTGGTTTGTTTCAGTCTGGTGGATAATGGTGTGGGCAGTGCCGGTGCATGTGCTCTGGCTAAATTTATCCGA[C/T]AGAACAAAAGTCTGGAAGAATTGTGGTGAGTGGCTTCAGCTTTTTTTAGTTTTCATTTTCTGAGTCAGACTAGGATGATCTAACTCTATTACTCCTAACCAGGTTAAACAAAAACTCCATCTGCAAGGAGGGGGTTGATTGTCTGATAGAGGCACTGAAAATGAACACTAGTGTTAAGAAAGTCTGGTAAGGATATTTCCCAGCATTTTAACTTACCATACACTGGTTTTTACTTTGAAAAAGTAATTGATTGAAATGTGGAGTTAGACTTTCAATTAGAATTTCACATTAAAACATTTACAGTTTTAATTTGGACTTTTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTAAATATTATATTATCCATGTCTATGGTTTGTGTTTTGAATAATATTATATCCTTACTACAAAGACTCTTTGCTTTGTGCTCTTAAAGGCTGAGAGGAAATAATCTGAGCCCACAGGAAG
Associated Phenotype:
Not determined