Busch Lab

ZMP

sf3b14

Ensembl ID:
ENSDARG00000009753
ZFIN ID:
ZDB-GENE-040625-36
Description:
pre-mRNA branch site protein p14 [Source:RefSeq peptide;Acc:NP_001002067]
Human Orthologue:
AC008073.5
Human Description:
Pre-mRNA branch site protein p14 [Source:UniProtKB/Swiss-Prot;Acc:Q9Y3B4]
Mouse Orthologue:
0610009D07Rik
Mouse Description:
RIKEN cDNA 0610009D07 gene Gene [Source:MGI Symbol;Acc:MGI:1913305]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa6642 Nonsense Mutation detected in F1 DNA Not yet available
sa37110 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa6642
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000017485 Nonsense 47 125 2 4
Genomic Location (Zv9):
Chromosome 20 (position 35458954)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 35531467
GRCz11 20 35434346
KASP Assay ID:
554-5287.1 (used for ordering genotyping assays)
KASP Sequence:
TCACTGCAGAGGAGATGTATGACATTTTTGGAAAGTATGGGCCTATTCGT[C/T]AAATCAGAGTGTGAGTATCAGTCWGTTTCTTGCATTAACATACTTTCACA
Long Flanking Sequence:
AGGTCTTAAATAATAAAAAGATCTACCCAATTAATTCAACACCAAATTACCATGTCAACTTTTGGTTTTATATTTTTATTTTTTTATTATTTTTTTACTGCAAAGAGGTGCAATTCACAACAGCAGACATTTTACAGCAAATTCTCTAAATTAAATTCCCTAATCTGGGAAAGAGAACTGAAGCAAAACATTCTTTTACATGATCTTTAATTATTAACAGATAAACTATTTACAGAAGTATCTGGGTCATTAGAAAATAATTCTTAGTGTTTTACCCTGTAAAAGTAAAAAAAAAATCAATCTTAAAGGTCTTAAAGTTTTAAATTACACTTGAAGAAACCTACAGAAACCCTGGTCTGTCTCAACACTGTTCTTTGTTGGCATCTTTTCAGATTCGTTTACCTCCTGAGGTGAACCGGATATTATATATCCGTAACCTTCCTTACAAGATCACTGCAGAGGAGATGTATGACATTTTTGGAAAGTATGGGCCTATTCGT[C/T]AAATCAGAGTGTGAGTATCAGTCTGTTTCTTGCATTAACATACTTTCACACAAAGGGTTTATGCTAGGTTTCCGCTACATTCATTCTTCCATGGCTGGGCGTCATGCCAAAATTCATCCTGCCAAGGCTACATTACCGCTTCACATTCAAAACATTTTATTTTTTTAATAGCGGGTGATAATCACACCAAAACTTATTAAAGGGTAAGTTAATTATAACTGCGTGAACATTTCTGTAACCGTAGTAGTGATGTGCGTCATTTGTTTAACCCTTCAAGGTTACAGGCTGACTGGCTGACTGACTGACAGGTGCGTGAGGCCAGCAAACACGACGTATAGCTGTTTCACTTTACTTCAGGACGCATTAATACGGCTCTGTAGGTCTATTGGACACATTCATAAATATTCCTAGCAAGTCTAATAAATGCTGGAGATATACTCGTTACATAAACTCAATAAATCGCTCTTCAGCAGCATTTATTTGAAAGTGCACAAGAAGAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa37110
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000017485 Nonsense 91 125 3 4
Genomic Location (Zv9):
Chromosome 20 (position 35461436)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 35533949
GRCz11 20 35436828
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GATCACCTTTCAGGGTTCAACGTCTGCAACAGATACTTGGTTGTGTTGTA[T/A]TATAATGCAAACAGGGTGAGTTTGTTTGGCTTTGAAATGCTAACATTTGA
Long Flanking Sequence:
TTGTCTTTTGTTTGTCTTTGGCCGCTAAAATGACTTCCCTATTCAGAATTGGCAAAGAATACTTTTTGAAATTCTAATATTAAGGAAAAGTCAGAATGTGCAAATATAAAACCTTACCCCAATGAGAAAACATATTAGCATCAAATGACTATCAAAGTACAACATTAAATAGAGCTAATGTTGTTTTAAAGTTATAATTACATGCTATTTCAGGCCGAATATTCAAAGTACAATATAGGCTGTCACAAGTTGTCATTGTTCAAAAATGAACAAATGTGCAAATATAGAACTAACTTTACCTCCGTGATTGTGTCATTAATATATTTGTGTTTGTAAGTTGAGTAACTGAATGTTCCGTTGTTATTTTTCTTCTTCAGCGGGAACACACCAGAGACCAGAGGCACAGCCTATGTTGTATATGAAGACATCTTTGACGCCAAAAATGCCTGTGATCACCTTTCAGGGTTCAACGTCTGCAACAGATACTTGGTTGTGTTGTA[T/A]TATAATGCAAACAGGGTGAGTTTGTTTGGCTTTGAAATGCTAACATTTGAATCAATCAACTTGTTAAGTGTGGCATCAAGCAAAGCGGCTTTCAGGTCAAAGGGCTCTATCAAAAGTAACGGGGAGGCTCAACAAATGGAAATAATAAACATTTAAAAATCGATTTAATGCTTTCAAAAATCACGATCGCTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGCGCCTAATATCTGATGGCCAGAAAGTGATACATTTTTATAAATTGTTAAAATATTGGTGTCTGCAAGCAGCAAGACTCTTGTGTGCACCATGGTTTTTATATAAAATTCACTTAAATAAGTGATGTGACTAAAAAGTGGACATAAACGAATCTTTTCTCAATTGAAATGAGTAGTACCTTGAACCCGAAAACAGTATTTAATTTCTTTCTTCACGACTTAACAAGCGAATAAATGTGTAA
Associated Phenotype:
Not determined