ZMP
caprin1a
Ensembl ID:
ZFIN ID:
Description:
GPI-anchored membrane protein 1 [Source:RefSeq peptide;Acc:NP_001003484]
Human Orthologue:
CAPRIN1
Human Description:
cell cycle associated protein 1 [Source:HGNC Symbol;Acc:6743]
Mouse Orthologue:
Caprin1
Mouse Description:
cell cycle associated protein 1 Gene [Source:MGI Symbol;Acc:MGI:1858234]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa16512 | Essential Splice Site | Available for shipment | Available now |
| sa20949 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa16512
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000101018 | Essential Splice Site | 251 | 657 | 8 | 18 |
| ENSDART00000128110 | Essential Splice Site | 251 | 670 | 7 | 18 |
Genomic Location (Zv9):
Chromosome 7 (position 28133798)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 7 | 26736737 |
| GRCz11 | 7 | 27007930 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCTTCCCTGCATGGCTGATGGCTCGTGTTTATGTTCTTTGTTTGTTCACA[G/T]AGGGAGCTGCTCAGGAATACTCAGAAACTGAGGTTGAAGCAAYAGAGGTG
Long Flanking Sequence:
CAGTGGTCATGCACAAAGCCTCTCGACTGGAGGTTTCAATGATGGACAGTCTCTGCTTGCATATTCCTACTGAGAGGGTGGCAATCGTGATAGGATCCGATTCTGCAAACTCAGCAAATGAGACGTGGCTATATTTGTTTGCTGGCATCGTTGCAGTTTTGGTTTGCTAAAATGATTCCAAATTAAGTTAACATCTGCAGTCAAGCTAACTTGGCCATACCTTTAACCAGTAATTAATTATTTTGTTTTCTTTGTGTCTTTATCAGACAAAGCCCTTAAGGAAACCTTGGACAAGATGCTGCTAAGTGGGTACTTTGATCGTGCTCCAACACATCAGAATGGAGTGTGTGAAGAAGAGACGGGAGCCACAGTGGTGGAGTCATCAGAGAGCGAGGAACATCCTGCTGAGCCAGGTAAAAACAAAACCCTCACATTTCTGAGCAAAGCAATGCTTCCCTGCATGGCTGATGGCTCGTGTTTATGTTCTTTGTTTGTTCACA[G/T]AGGGAGCTGCTCAGGAATACTCAGAAACTGAGGTTGAAGCAACAGAGGTGTGAATTGATATCACATTTTTCACACGCTGATGATGATGAAAGCACATTCGGATTTAACCTTTATAACATTTAAACGCTCAACATTCTGTTTCAAAATAGAAAGATACTTATTTGGAAAATTCCAACAGAAAGAGTTGCTTTCGGTTCCAGCTTTATCATTTCATTTTTTATTTATTTAAAAGTCTTTCCTCAAGTCATTTGTTGTGACTAAATTTGGTCAAGCTAACAAAACATTTGCAATTTGATGAACTATTTGTGTTGGGTTTTAGGTCTTGAGGCAAATAAATCAACAAAATGGCCCTCAAATTTTTAATTGCCCCTCACTTATTGCCATAATTGCCGAGTGCCTTCGTGTCCCATTAGTGACTATACAGCCATATCGCACTGCTACGAGTATGATATTGTGTTTATACAACAGTTTGACGGCATAATCGTGTATAAATAATAAAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa20949
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000101018 | Essential Splice Site | 294 | 657 | 9 | 18 |
| ENSDART00000128110 | Essential Splice Site | 294 | 670 | 8 | 18 |
Genomic Location (Zv9):
Chromosome 7 (position 28136224)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 7 | 26739163 |
| GRCz11 | 7 | 27010356 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAGCAGCAGTGAAAAAGAGCAAGGAGCAGAGTGGAACACAAGTTCTCAGG[T/C]AAGATGCACCTCATTTGTCAATGAAAGTTTGGAATTGGAAGCAACCCTTG
Long Flanking Sequence:
CATTAGCCATTTAATAAAATGGCAGTTTTTAATGGCTGCAATAAACCTACTATTGTTTTATTGTAATTTGAAATTCACGCTTTTTCAAATAATTTGAAACATGCTGCGGCTTATGTATTCGTGTAACGTCTATAGTACACCAAACAAGAGAAACAAACTTAAATGGTAATGTGCATGTCTCGCATCACTAGTTTCAAATTCACTTAAAAATGCATTCATTTTGGCTTTATAATATTTGTTGTTTATACGGAATACAACAGGTTTATTTTCTCAATACTGTTACATTTAACATATGAATTAAATTAGAATGCTTCATTCTATTTAGAGTTATCAATAGCTTAATAGACATGTATTGAAAAATTATTTAATGAAATTGTAAAATGCAACTTTAAATGCACTTCTTTCTTCCTGCTAGTTTGTAAACAGACAGTTCATTCCAGAAGCTGCCTATAGCAGCAGTGAAAAAGAGCAAGGAGCAGAGTGGAACACAAGTTCTCAGG[T/C]AAGATGCACCTCATTTGTCAATGAAAGTTTGGAATTGGAAGCAACCCTTGGCCCAATTGTGTTTATTTTTGAGTTCACCATGTGATTTCCAGGTGGTTAGTGTCCTCCAGCAGCCACAGCAGCCTCCTGCAGCCATGAGCCCGACTCTGATGAGCTCAGATGCGCACACGCTGAACGCCGTCCTCCCTCCTCCTCCTGCAACAGATCCAGTGGTCCGAAAGCAGGCAGTACAAGATCTCATGGCGCAAATGCAGGGTACCTTTAACTTCATGCAGGTAAACTGGAGAATTTGTTCATTCATCAGACTTCAGTTGTATCAGTGAAGTTTTCCAACTCATGTTTAATGCAATGCAGGACTCAATGCTGGAGTTTGAGGGGCCGCCTTTAGATCCTGCCATTGTGTCAGCGCAGCCTATGAAACCCGCACAGATGGTCTGTCCACCAGGTTGGTACTTATAAGTTACTTTTTAAAGTTATATTGTTCTTTAAAGCTAATAAGA
Associated Phenotype:
Not determined