ZMP
clgn
Ensembl ID:
ZFIN ID:
Description:
calmegin [Source:RefSeq peptide;Acc:NP_001071009]
Human Orthologue:
CLGN
Human Description:
calmegin [Source:HGNC Symbol;Acc:2060]
Mouse Orthologue:
Clgn
Mouse Description:
calmegin Gene [Source:MGI Symbol;Acc:MGI:107472]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa17985 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa17985
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000101671 | Essential Splice Site | 150 | 630 | 5 | 15 |
Genomic Location (Zv9):
Chromosome 1 (position 40996650)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 39886059 |
| GRCz11 | 1 | 40604132 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTCTGCTTAACAAACCATTTGTGTTTAAGGACAAACCTCTCATCGTCCAG[T/C]AAGTGTGTTTTGTATTTGTTGTAAWCTGACATTWGACATACCTTGGATTT
Long Flanking Sequence:
GGCTTTAGCACTATGTCCTAAACAGATGTAACTTGATAACACATTATTAAATATATATTATTCTTTTTGTTGCTTGTTCAAACAGCTTGTTTAAAATGAGCTGAAACAACACTTACTTTTGTTCTATCTGGAGACAACTTAATTGTTTTATGTTCAATCCACTTAAATAAAAAAAAAACTATGAAATTAACACAAATGTTTGTGTTGGGAAAACATGAAGACATAATTTGTGTGTGACAACTGAAAGTAATTGTGTGGAACCAAGCATTTTTACAGTGTATCATAGGTCATGGAAATTCAGCTTTTTGGTTCGTGAAAGTCTGGTAATTTGAGTGGGAACCTTTTCATTGTCTGTAGGTAAATGGGAGGTTGAGCCCCTGAAGGAAAATACAGTGCCTGGTGATTTAGGTTTGGTGCTGAAATCTCGTGCCAAGCATCATGCAATCTCGGCTCTGCTTAACAAACCATTTGTGTTTAAGGACAAACCTCTCATCGTCCAG[T/C]AAGTGTGTTTTGTATTTGTTGTAATCTGACATTTGACATACCTTGGATTTCTTTAATAAAACTTGTTAATTCTAACAAAACCCAATCTATATACAGGTACGAGGTCAATTTTCAAGATGGAATTGACTGTGGCGGTGCCTACATCAAGCTTTTGTCAGACTCTAAAGACTTAGAGCTGGTATGTTAATTGTCTGTTTCGTATTACCAGAACAAATTAGAAAAAAAATTCCTTTGTGTGCTTAAAGATGCTAATTTTATAGAATACTAAAATAGTAAGGTACTATTGGATTTATATAGCAGATTATGAATATGATATGATGTATATTAATGACTCACAGGAACAGTTCCATGATCGCACACCGTACAGCATCATGTTTGGGCCAGACAAATGTGGAGAAGACTACAAACTGCACTTCATCTTCAGACATAAAAATCCCCTCAATGGAGACGTGGAAGAAAAACATGCCAAACGACCCGATGTTGATCTGAAGAAGATCTAC
Associated Phenotype:
Not determined