Busch Lab

ZMP

sh2d3cb

Ensembl ID:
ENSDARG00000009081
ZFIN ID:
ZDB-GENE-040426-1052
Description:
SH2 domain containing 3Cb [Source:RefSeq peptide;Acc:NP_957370]
Human Orthologue:
SH2D3C
Human Description:
SH2 domain containing 3C [Source:HGNC Symbol;Acc:16884]
Mouse Orthologue:
Sh2d3c
Mouse Description:
SH2 domain containing 3C Gene [Source:MGI Symbol;Acc:MGI:1351631]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa26608 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa20572 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa26608
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000003444 Essential Splice Site 514 635 10 11
ENSDART00000142134 None None 140 None 4
ENSDART00000143500 None None 232 None 4
Genomic Location (Zv9):
Chromosome 5 (position 67642475)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 64444116
GRCz11 5 65133113
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACTGCGCTTTAAATACTGTGTGCCAAGCAAGTAACAACTCTCTTTTTTTC[A/T]GCGATAAGCAGGCACACAGAGACAACGTTCCCCCATGTGCTCCCCCTGCT
Long Flanking Sequence:
GCAGAAATCATATCTCAAAGCATTTACTGAGGCACTGGCAATTCTTACTGGGGCACGTGCCCCAGTAAATGGGGTCTAGCGACGCCCCTGCTACTGACTATGGCCATTCAAGTAATTTAATTAATAGAATTGTAAATGCGTGAATAAAAATAGCTATTTAAAAAGTCCTAACAAAACATTTGTTTTTCAGATTGCTCGTTTGAATGAGAGCTGGACGATCTTACGTCAGAAGTACACAGAAAGTGCTATTCTTTATGAGAAAACTCTTAGACCCTCATTGAGGATGATGAACGATGGAGAAGGTATTCATTCAACATGTATTAATCTGCAGTGTTTCTTAATAAATATATATTCAGAAATACTGTGAAAAATTACCCACTCTGTTAAAAATCATTTGGGAAATACTCAAAAAAGAAAAGGGAGGGCTAATGATGATGACTTCAACTCTATACTGCGCTTTAAATACTGTGTGCCAAGCAAGTAACAACTCTCTTTTTTTC[A/T]GCGATAAGCAGGCACACAGAGACAACGTTCCCCCATGTGCTCCCCCTGCTGTCTCTGTTTGAAAGGACCGTCGAGGAGTTGGAGTCATGGGAAAGTGCAGACACTGGAGTGGCGCTGGTTTTGAGCCATCTGGATGCTGCACGTACCATCGCGTTAAATGGGAGGATCTTCAGTGCTAATGCAGAGGCCAAGCTGCAGGGTAATGGCTTCATAATCTAAACAGTTTATAATGCTTACAGATTCTCCCAGTGTTGGCGTGGGTTTCCTCCGGGTGCTCCGGTTTTCCCCACAGTCCAAAGACATGCAGATTAGGTGAACTGGATGAACTAAATTGGCTGGAGTGTGTGTGTGTAAATGAGAGTGTATGGGTGTTTCCGAGTACTGGGTTGCGGCTGGAAAGGCATCCGCTGCTTAAAACATATTCTGGAATAGTTGGTGGTTCATTCCGCTGTGGCAACCCTTGATTAATAATGGACTAAGCTGCAGGAAAATTAATGAAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20572
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000003444 Nonsense 629 635 11 11
ENSDART00000142134 None None 140 None 4
ENSDART00000143500 None None 232 None 4
Genomic Location (Zv9):
Chromosome 5 (position 67633965)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 64435606
GRCz11 5 65124603
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCGTTACTCCAAGTTTGATGAAGTGCTGACAGCTCTGTCTAACAGACTC[G/T]AGCTTTCACACTCTGCAAAATGAAGGGATGAACTCTATTCACTTTTATTT
Long Flanking Sequence:
GGCATGTTTGTGGGTGTGTGTGTGTGTCTGGGTTTCTGCGTCAGAGGGCGGGGCCTCAGGTTTGAAATCTCCCGGGTTTGCGCGTGCACGTGAAAACCTTGGTTTCGTTCGTACGTCATGGCGAAACACCTAATGACTTGGTATCAAGGCGACTCTATTGAAGCACTTTGAGTTGACTCTTTTAAAGATGAATCAACCGTTTTAAACACTGTACTCTTACAGATTTAAGCCTTAGCTGGATACTTCACTTCACTTAGAGCTGTGTTACACACTACATGGAGGGGAATTTTCAAAAACCCATAATATGGGCTCTTTAAAAGTTGTGTTTTAGGTCATCTTTTTCTGATTTTGCAGGATTTGAGGAGGAAGCAGATGTGCGGGAGATCTTCCTGACAGAGTTCCAGATGCGTCTCCTGTGGGGAAGCCGTGGAGTGGAAAGAAACAAAGATGAGCGTTACTCCAAGTTTGATGAAGTGCTGACAGCTCTGTCTAACAGACTC[G/T]AGCTTTCACACTCTGCAAAATGAAGGGATGAACTCTATTCACTTTTATTTGTTAATATACTGTGTTATGAATTTCTGTACTGTTATTTTTCCATTGGACATATTTCTGCTGTTGTATGTAAAATGAGCACCTTGTGTATTTCAATTTTAACTTATTTGACTTTTTTCTGATTATTTGCCCGTTTGTATAGCTACATGATTTTATACAGTGTACATAAAATTCATACTCATAGTTATATTTTCTGAAACTGTTAAACATGCTAATATTGTAAGTTTTTAACTATTTAATTGCACTGCTATTGGTTCATATAATCAATAGTCAAATAATGGGTAATATTTACTCGGAGGAACACTTTTTTAATGCATTTAATGCTAATATTCTATACTTATACATCACTTAAAGTAATAATAAAAATGCAGATTTGGTTGGTTGGTATATTGTGGTGTGTGTCCAAGTGAAATATTTGTTTATCTGATTTACTGCCTTTTACTGTTTTGAAA
Associated Phenotype:
Not determined