ZMP

msxb

Ensembl ID:

ENSDARG00000008886

ZFIN ID:

ZDB-GENE-980526-26

Description:

Homeobox protein MSH-B [Source:UniProtKB/Swiss-Prot;Acc:Q03356]

Human Orthologues:

MSX1, MSX2

Human Descriptions:

msh homeobox 1 [Source:HGNC Symbol;Acc:7391]
msh homeobox 2 [Source:HGNC Symbol;Acc:7392]

Mouse Orthologues:

Msx1, Msx2

Mouse Descriptions:

homeobox, msh-like 1 Gene [Source:MGI Symbol;Acc:MGI:97168]
homeobox, msh-like 2 Gene [Source:MGI Symbol;Acc:MGI:97169]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa39680	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa39680

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000008468	Nonsense	162	257	2	2

Genomic Location (Zv9):

Chromosome 1 (position 49860861)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	48710042
GRCz11	1	49354462

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CGTTCAGCACCTCCCAGCTGCTGTCGCTCGAGCGCAAGTTCAGACAGAAA[C/T]AGTACCTCTCTATCGCCGAACGGGCCGAGTTCTCCAACTCCCTCAACCTC

Long Flanking Sequence:

AAGAAAGAAAGAAAGAAAGAAAGAAATGGGATTGTAAAATGCACAATGAGAAAGAAATAATAAATAGCTTATACAACAGTTGCAAACCCAAGTCTGAAAAGAAAGACAAAAATAGAAACTCTAATGCAAAAGAAATGTATTTGTTGTAGCGTGTAACAAAAACAACAACAACAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAGGCCTATACACAACCAGAAAAGTTGCATGCCCAAGTTTTCATTTTTTAAAGAACTAACGAAACTAAGCAAGAAAGACTCTAAAAATGCACAATGAAGGTAGGCTGCTGGTTATTTGGAGAGGTTTTCTCATTTCTAAGTTAAAAACAGTTTGTTGGTCGTTTCGTCCAGGTCACCCGAGCCCAACGCCGTGCACCTTACGCAAGCACAAGACGAACAGGAAGCCGCGCACACCGTTCAGCACCTCCCAGCTGCTGTCGCTCGAGCGCAAGTTCAGACAGAAA[C/T]AGTACCTCTCTATCGCCGAACGGGCCGAGTTCTCCAACTCCCTCAACCTCACCGAGACTCAGGTCAAGATCTGGTTCCAGAACAGGAGGGCGAAAGCCAAGAGACTCCAGGAGGCCGAGCTGGAAAAGTTCAAATGCGCGTCCAAACCGCTTCTGGCCCCGTTCGCGCTGCCGTTCCCTCTGGGATCTCCATCATCTCTATACGGACCTCCTGCCTCGTTCCCACGACCCGTCCCGATGCCAGGACTATTTAACGGACCCGTGTCCTATGGGATGTATTATTTGTCTTAAAAACTTTTTTATTCCACTCTGAAATTATTTGAGAGACGTTTACATAAGTCACAGGGAAAGTTATATATATGAGCTATAATTGCACTATTAAGTGCTGAATAATACTAACGAACAACATGTACTTTTGTTATTATTCTGAGGAACCGCTTTTAATTACAGACAGTAGTAAATAATAAGTGTTGGCTAGAATCGTCATGGATTGATTCGGTA

Associated Phenotype:

Not determined