ZMP
chga
Ensembl ID:
ZFIN ID:
Description:
chromogranin-A [Source:RefSeq peptide;Acc:NP_001006059]
Human Orthologue:
CHGA
Human Description:
chromogranin A (parathyroid secretory protein 1) [Source:HGNC Symbol;Acc:1929]
Mouse Orthologue:
Chga
Mouse Description:
chromogranin A Gene [Source:MGI Symbol;Acc:MGI:88394]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa29374 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa29374
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000016014 | Nonsense | 157 | 369 | 6 | 8 |
| ENSDART00000062078 | None | None | 273 | None | 7 |
| ENSDART00000126919 | None | None | 246 | None | 6 |
Genomic Location (Zv9):
Chromosome 20 (position 27063407)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 27134710 |
| GRCz11 | 20 | 27033800 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCGAGGAGCAGGAGAGGAGAGCGAGGAGACAGAGCAGCAGTCTCAGAAA[C/T]AAAACCAGATTATTACTGAGGAAGACCACAGTAAGGAACAAGAAGAAGAA
Long Flanking Sequence:
ATCTTTGAATCTGACTTTAAAGGAAACAGGTGTAAGTAAAAGCGTAATGTAAAGAATAATATACACACGTTTATGTATGTATCATAGATTAATCAACAAAAATTAATCAAAAGATTTTCACCTGAAAGAAAACATGAATTGCTTTAAATATGGAATACAGTATGATATATAATAGTAAGATTTATTTTTATTTATTAATAAAACCTTAGGCTTTGTCCTAAAAGAAAGCTAAAAGATTAGCTTGCTGTATAACGTGGAATTCTTATCTTTTTATGTAATGTTCTTTGCTTAAGCAGGGCATGCTTTTTTACTAGATAAATTATCGGAGCCATTTAGATTCAGTGATGCTATGACACAAATGAGCATTTAACTTCAAGATAACCCTTTTCCATCTAACAGACGATCAGTCAATGCTGGTTGCCATGGAGAAACCAGAAAAAGAAACAGAGAAGCGAGGAGCAGGAGAGGAGAGCGAGGAGACAGAGCAGCAGTCTCAGAAA[C/T]AAAACCAGATTATTACTGAGGAAGACCACAGTAAGGAACAAGAAGAAGAAGAAGAAAAGAATCACATCTCTAACTCCTTAAATCCAGAGCCGAAGACAGACTCACAGGAGGAGACAACGATAAGAGATGAGGAGAGGAAACACTCCAGCTCAGAAAATGAGGAAAACGATCCGGCTCATAAAGAGGGTAATGATGAATACAGTATGCGGCATGCCATATGTGCTACTTTCAGAGTTTATCTTTGAGTTTAGAGTGTCATTCATTATGATATGATATAACAAGCAGCAAAGTGAGTTGTAAATTAAAGCAACACTCCACTTTTTTGGGAAAAGGGCTTATTTTACAAGTCAATTTCACAAAACAATTTCATAGTTTTTTGAATCCTACTATTCTTTAGTTAAGTTGTGTATTAAAACTGACGGAAAATGAAATACTGCTGTTGTCCGAGCTGATATGGCTACCAACTCTACTATCATTCTACTATCATTTGCGGTAATGAT
Associated Phenotype:
Not determined