ZMP
si:ch211-30i2.1
Ensembl ID:
ZFIN IDs:
Description:
Novel protein similar to H.sapiens LYST, lysosomal trafficking regulator (LYST) [Source:UniProtKB/Tr
Human Orthologue:
LYST
Human Description:
lysosomal trafficking regulator [Source:HGNC Symbol;Acc:1968]
Mouse Orthologue:
Lyst
Mouse Description:
lysosomal trafficking regulator Gene [Source:MGI Symbol;Acc:MGI:107448]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa17821 | Essential Splice Site | Available for shipment | Available now |
| sa14050 | Nonsense | Available for shipment | Available now |
| sa14595 | Nonsense | Available for shipment | Available now |
| sa4537 | Essential Splice Site | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa17821
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000099439 | Essential Splice Site | 121 | 1862 | 4 | 17 |
| ENSDART00000136165 | Essential Splice Site | 121 | 1216 | 5 | 8 |
| ENSDART00000136516 | None | None | 250 | None | 4 |
| ENSDART00000143148 | None | None | 522 | None | 9 |
| ENSDART00000143262 | None | None | 747 | None | 15 |
| ENSDART00000148057 | None | None | 431 | None | 9 |
Genomic Location (Zv9):
Chromosome 13 (position 50984077)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 49695174 |
| GRCz11 | 13 | 50008417 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGTGAAGAAWTCTGTTTAAATCCTGAATTAAYCTCTCAAACCTTTTACTC[A/C]GGAGTTGACCTGTCGGGAAGARCTGCTTAMGCTCTTATTGTCTCTGCTAC
Long Flanking Sequence:
GACACGGCCCTTTTCTCTGAACTCAGCACTGCTTAACTCTCTCTCGACACAACATCAATCGCCTGTGTGTTTGCATAGTGGTGGGTCAATATGGGTCCCCAGCCATTTTGCTAATTACCTCATGAGTATGCTGCCAGATCCTTGTTTACCTGAGGTCACACAGCACTGTGGCAGCAGCCCCCTGTATTTGCTTTTAATTCACACTTGTCAGAGTGCTTTCTCTTCTCCTTGTGAGGAATGCTCTCTCGCTCTGGGAGGAGACTCTGTATTTAGAGGCTCACTGTCGTAAGCCATTGCAAGAGGTCCTTCTTAATACAGTTTTGTCCTGTCATACTGTTGTCTGCAGTTCTTCCATCTTTTTCTGGATAGTAGCTCTACAAGAGATCTCTGTGAAGCAGACGTGAGAAAAGTAACTGCTTCTAGGAGACTTTGATTGGATTGCTTAGGCAGAGTGAAGAATTCTGTTTAAATCCTGAATTAACCTCTCAAACCTTTTACTC[A/C]GGAGTTGACCTGTCGGGAAGAACTGCTTACGCTCTTATTGTCTCTGCTACCTCTGGTCTGGAAGATTCCTGTTCAGGAGGAGAAAGCCCCAGGTAAGAGTCACGATAAAGAGCTTTAATAATGCATCGTATTAACAGCCTTGTTTTTGGCAGTGCACTAGACGTATACTGTAACCCACCTTGAAACTTGAATTAAGTAATTGTGTTAATATTAAATGAGATTCTGACATTGCATTCATTTTGAAAGATGATATACTTGTACACAATATGTTTTATAAAGCAAACGATGGAGGTAATCTTGCGAAGACTCTATGAATTGTTAAAAAGCTACGTGCATGAACAACAAGTGAAACCATGAGATGGCTTAAATTTTGAAACAGTACGATTGAAGGAAAATGGAAAGGATAAGAGTTCTCATCGAGCTTGAGGCCTGAGGTATTTAGAGCAGGCATGCTAATCTTTTCTAGCAGCTACTTTCCACATTGTTGAGTTATTAGCTCC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa14050
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000099439 | Nonsense | 332 | 1862 | 5 | 17 |
| ENSDART00000136165 | Nonsense | 332 | 1216 | 6 | 8 |
| ENSDART00000136516 | None | None | 250 | None | 4 |
| ENSDART00000143148 | None | None | 522 | None | 9 |
| ENSDART00000143262 | None | None | 747 | None | 15 |
| ENSDART00000148057 | None | None | 431 | None | 9 |
Genomic Location (Zv9):
Chromosome 13 (position 50982884)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 49693981 |
| GRCz11 | 13 | 50007224 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCTTGAAAAGGTCTGCAAATTTGACAKGACCATCAATCATAACCCAGGCT[T/A]GGCGGTCAGCGTTGTTCCCACCCTCACAGAGATACTCACTGACTTTGGTG
Long Flanking Sequence:
GGGAAGGACCATCTCTCAAAAGGCGGGGCAGGATCCATGTGATGTGCAGAACTCTACGAAGCGTTTATCTGGCTCCTGGAAGTCACGTCGCTCACGTAGGACAGCTCAGCGGTACTCTGTAAGGGATGCACGCAAATCTCAGCTTTCCACGTCAGACTCTGAAGCCAACTCGGACGATAAAACCACAAACACTGGGAGCAAACATCGCAGATTCCATAGTACGGCCATTCATGTTAGTTGCCAGCTTCACCAGTCCAACAACTCCTCGCAACCAGCACCGCAACATCCCACTCTTGATGCAATGGGCACTTTTGAGCCATCACAACCTCACCTGAGACTTTTTGGATCTCACACAATGGATCCTAACATGCTATCAGACCCCACCACTCTCTCCATCTTCAACCGCATGGAGAACTCGCCTTTTGATCTCTGCCATGTTCTTCTGTCCCTTCTTGAAAAGGTCTGCAAATTTGACATGACCATCAATCATAACCCAGGCT[T/A]GGCGGTCAGCGTTGTTCCCACCCTCACAGAGATACTCACTGACTTTGGTGACTGCTGTGGTCCCAGTGGTGGAGGGGGAGGTGGGATTGATGAGTTAGCTGGAGGCTGGACTGAGGAGCCAATTGCACTTGTTCAAAGGATGCTTTTACGCACAATTTTGCACTTGATGTTTGTTGATGTTGGTCAAAATGAGACACTGCCTGATAATCTACGCCGAAGCTTGACTGACCTCCTTAGAGCAACTTTAAAGATTCGTACCTGTTTAGAAAGACAAGCGGACCCTTTTGCTCCAAGGCCAAAGAAGACTCTGCAGGAGATTCAAGAAGATTTTTCCTTCTCAAGGTACCGCCACCGGGCCTTGCTACTGCCAGAACTCTTACAGGGTGTCTTACAGCTACTGCTGGGCTGCTTGCAGGCCTCTGCTCCAAACCCTTTCTTTTTCAGTCAGTCGCTTGAGTTAGTTCATGAATTTGTGCAACACCGTGGCTTGGAGCTCTTTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa14595
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000099439 | Nonsense | 1539 | 1862 | 12 | 17 |
| ENSDART00000136165 | None | None | 1216 | None | 8 |
| ENSDART00000136516 | None | None | 250 | None | 4 |
| ENSDART00000143148 | None | None | 522 | None | 9 |
| ENSDART00000143262 | None | None | 747 | None | 15 |
| ENSDART00000148057 | None | None | 431 | None | 9 |
Genomic Location (Zv9):
Chromosome 13 (position 50955757)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 49666854 |
| GRCz11 | 13 | 49980097 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTGGATTCAGCGCATCGCTGTGGGTGCGGGCTGGGAAAGATGAAGACGKA[C/T]GATCTAAGAAGGGTGAGAAGAACRTTAWTAGCTTTATGTACTTACYCGGG
Long Flanking Sequence:
TGCGCAATAAAAATACACATTACATTCAAACCAAACCATCCACTTGAATACTGATATATGTCATGTAACACATTCTGCAGTGTTGAAAGCGTTAAGTATTTTCTTCACTGAATGCCTGATTATGTGTTTGTTTGGATCATTTGCAGGAGATCTTGCTACGAGGCGTGCTTCAGATCGTGGAGGCAAACACAGACACAGAACCGCTATACTTCATGTCCTTTCCCATGATCCCTGGCTCTGGGGGTCCTGGCCTGAGCCCCTCCCCTGGGACAAGGCCTCATGGGGCGACTGCTGGTAAGGGTGGTGTAAACACTATTCTGAGGGGTAAACTACCGCTCGGCCGTGGTGAAGCAGACATGAGCCGACCTGGTCACCTGCGCTCCTCGCCCTGGCATGCTGCACCCTTCCACCTGCCCTTGGTGGGACAGAACTGCTGGCCTCATATGGCTAGTGGATTCAGCGCATCGCTGTGGGTGCGGGCTGGGAAAGATGAAGACGGA[C/T]GATCTAAGAAGGGTGAGAAGAACATTATTAGCTTTATGTACTTACCCGGGCTGTGCCATTAATCTAGGATGTGTGCAGAGTCATTCTTACTTTAATTTTCCTTTGGCTTAGTCTCTTTATTTAATCAGGAGTCGCCACAGCGGAATGAATCGCCAACTTATCCAACATATGTTTTACACAATAGATGCCCTTCCAGCTGCAACCCAGGATTGGGAAGCATCCATACACACTCACTTATACACTACGACCAATTTAGTTAATCAATCCCCCTATAGCGCATGTGTTTGGACTGTGGGGGAAACCGGAGCACCCGGAGGAAACCCACACCAACATGGGGAGAACATGCAAACTCCACACAGAAAACGCCAACTGACCCAGCCAGGACTCAAACTAGCCACCATCTTGCTGAGGTGACAGTGCTAACCACTGAGCCACTGCGTCACGCTAAATAATATTGTAATTAATTTCCAGCAGTTTGCATTTGTTCCTCTCTGCAAAGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa4537
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000099439 | None | None | 1862 | None | 17 |
| ENSDART00000136165 | None | None | 1216 | None | 8 |
| ENSDART00000136516 | Essential Splice Site | 62 | 250 | 2 | 4 |
| ENSDART00000143148 | None | None | 522 | None | 9 |
| ENSDART00000143262 | None | None | 747 | None | 15 |
| ENSDART00000148057 | None | None | 431 | None | 9 |
Genomic Location (Zv9):
Chromosome 13 (position 50917146)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 49628243 |
| GRCz11 | 13 | 49941486 |
KASP Assay ID:
554-3548.1 (used for ordering genotyping assays)
KASP Sequence:
TCTTCTCTCGGTCATGCTTGGATACACAAACCTGTCCATRTATTCCCGTA[G/A]CTCCTGGACGCCTACTTCAGCCGCGCTCAGAAAGAGCAGAAGGAGAARTT
Long Flanking Sequence:
AACGGATCCGCAGCTCAATTTGGATCTGAATTTTCCGCATACGGAGATGATCGGAACTCAACGCAGCTCCCGGACTGCTCTCCATTGGAAAGAATGACTTCCGCTTGTCGTTTGTCGTGTGCAGTGGAAAGGAGGCTTTAGAAGGAATGCCAACCAATAAAATCTAAGAATATGGTGTTAGCTACAGTATATTCTGTTTCAGCTGTAAATGCTCAGCTTAAAGTCTTCTGCTTCTTGCTGACGTTTTTACTTCACTATTTCATTTCAAAGGCATTATAGTGTGAGATTTTTAAAAACATGAATATGACACAAAGGAGAGTGTGGTAAAATGAAGATTGATTACTGACAGTCTCTGTCTGCGTATCTCATCTGATATGATGAACCCCTGCTTTGACTAATAATCCCCTTTATATGCTGCTCTGATCCATTGATATTAGCTTTATTTTAATGTCTTCTCTCGGTCATGCTTGGATACACAAACCTGTCCATGTATTCCCGTA[G/A]CTCCTGGACGCCTACTTCAGCCGCGCTCAGAAAGAGCAGAAGGAGAAGTTCCTGAAGAACCACGGCTTCTCACTGCTGGCCAATCAGCTGTACCAGCACCAGGGTTCACAGGGGCTGCTGGAGTGCTTCCTGGAGATGCTGTTCGGACGACCGGTCGGTCTCGAGGAAGAGTGAGTATGAAAACTAGGGATGCACTGTATTTTCACCGTATACATATAAAGTAGACCAATGTAATAAGAAAATATCAGTTTGCAACATTAACAAGCCATTTTTAACGTCTGAAAATCAATGAAAGTGTAAGTCTGGAGCCAAAAAGATTCTAATGGCTGTCAATAAGGTCAATAAATTAGCTTGAGTATATGTATGTCATTGAGTGACGAGCAGTATTTTCTATTCCCTCAGTCTGGATCTGGAGGATATGGAGAACATCTCTCCATTCAGGAAGCGCTGTATCATCCCAGTGCTGGGTCTGCTGGAGAACTCTCTGTATGAGAACTCAC
Associated Phenotype:
Not determined