ZMP

glcci1

Ensembl ID:

ENSDARG00000008503

ZFIN ID:

ZDB-GENE-031010-41

Description:

glucocorticoid-induced transcript 1 protein [Source:RefSeq peptide;Acc:NP_001073419]

Human Orthologue:

GLCCI1

Human Description:

glucocorticoid induced transcript 1 [Source:HGNC Symbol;Acc:18713]

Mouse Orthologue:

Glcci1

Mouse Description:

glucocorticoid induced transcript 1 Gene [Source:MGI Symbol;Acc:MGI:2179717]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa6557	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa1717	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa6557

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000036854	Essential Splice Site	220	531	3	8

Genomic Location (Zv9):

Chromosome 19 (position 25865075)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	25795187
GRCz11	19	25379410

KASP Assay ID:

554-5346.1 (used for ordering genotyping assays)

KASP Sequence:

CACACACCAGCGCTCAGCGTCCTGGGGCAGCTCTGACCATCTTAAAGAGG[T/A]ACACAAACACACACACAAATACACACACTTCCACCAACAGCACAAAACAC

Long Flanking Sequence:

CCTATTGCTCCATTACCCTCTTTCATTTTATTAAATTATTTATTGATTTTTTTTTATTATTCAATTTTTTATATCTGAATACCCTTAGACTGCCCTAGAAAACTATAATGCACTTTTTATTTCATTTTGATCTTTGTTTTAAAATGTTTATCCATGCTTGTAATTTTTTACGTTTTATGCAGATTCACTCCCCTACAAAATCCTCCCAAACAATCTAAATTAATGTTTTTTTTTTTCCAACTAGAGTTATTCAAGTCCTCTGAAACAGTATTCATCCTACAACATTTATTCAAAATATTGAGATTTTTCCAATATCGTGCAGTTAGTCTCGATAACGCCAGCTCGCACAGCTATTATATCAAGTACTATTCCCCGTGCACCAAAAAACAATGTGCGTTTTGTGTTGCAGACTCCTGGATGTTGGAGTGACGAGAGTGAAGAGAAAAGGAGCACACACCAGCGCTCAGCGTCCTGGGGCAGCTCTGACCATCTTAAAGAGG[T/A]ACACAAACACACACACAAATACACACACTTCCACCAACAGCACAAAACACTCCCTTTTAACAGTGAAACACTATACGAAGTGTGTCTTGCGCACACAGCTGTGTAGTTTTTCCCCTTGGGTTTGGAGAACAAGAAAGTGCAATCACACTAACAGCTATTAACAGAGCTCTCACTGTCCTGAAAGTGATGAGCGCTGCACTTCTGCTTTTGCGATGATCTCATCCTGTGTGGCTTGCAATGTAGCCGCTCGTACTGGGGGAGGGAGGCGGTAGAAATAAAACCCCCGTAACCTAGCTCTGCACGAGGCTGCCAGTCACGACGACCCATCCGTCTCCTCCTGCACTAGCTGCTATATATAACTTCCTGTGTGGCTTCAGACTTCCTGCGCTGAGCGGAGTGTTATTGCTAGTGCTAGCCGCAGCAGAGTCAGCCTTATCACGGGTGCTCAGCTCCACCCTGACGATTCAGGGAACGGTGAGATAAGACTATATCTCCCTCTT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa1717

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000036854	Nonsense	411	531	7	8

Genomic Location (Zv9):

Chromosome 19 (position 25849448)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	25779560
GRCz11	19	25363783

KASP Assay ID:

554-1663.1 (used for ordering genotyping assays)

KASP Sequence:

AGTTCTCCTCTTCCTAAGTTCGCTTCATCTCCAAAGCCCAACAACAGTTA[C/A]ATGTTCAAACGGGAGCCTCCAGAGGGCTGTGAGAAGATCAAAGTCTTTGA

Long Flanking Sequence:

AGTTTCAAAAATTATTTGTGGAGAATTTTACCCAGAAACTTCACATACACACTCAAGGAACTTCAGAGATTCATTTTACATCTCGTAAAACGGGGCATAATAAATTTGAAGCGATACTAAGCAACTTTCTCTTGCAGCTTCCCCTTTTGGTTGAAAGCACAATTTCCTGTTACCAACAAAGCAAATCACACAGAATTCAGCAGGATTCATCTACTTAAAAGTTATTCTACCACCAATATAATTTGTTACATTATTTTAAGGTTGAAAAACGTACATGCTGCTGCTCTAATGAATGTAGGCATTTAAAGTAGTGCACGTCATAACCGAAGAATGGGCTTATAATAAAAATAAAGTGATGATTTGTTAATGTGGATGCTCATATTGTTACTGTTTTCATTAAACTAAGCTTAATTGTGGATTTGTGTTTGTATTCCTGCAGACAGTGGCAGCAGTTCTCCTCTTCCTAAGTTCGCTTCATCTCCAAAGCCCAACAACAGTTA[C/A]ATGTTCAAACGGGAGCCTCCAGAGGGCTGTGAGAAGATCAAAGTCTTTGAGGAAATGACGTGAGTAGAGTTTTATTTCTGTAGTAAGCCTAAAATAGCACACTGGTGTTCAGCATGTATAATGTGAACAGTATGCAAATGCTGAAATTTCTTTCTTCACCTGCTACAATTTCTGAAATGTTTGGTTTAATTCCAGAATGCAGAATGGGATGCTATATGACACCATTTTCTTTTAATTTTCCATAGCAAATGTAATGAATTATCTAGAATGACTTTCATTTTATCTTTTAAAACAATGTTTAGTGGGTTGCTGGATACAAGACATTGAAAACATGCTAAATTAATTTTTAAATTGTAGTTTTACACTATTCTACAACTACTATTGCAGTATTCACAGACGTTAGTCCATATCATGATTTGATTTTGGATGCTGTAGTTTTGATTTATTCATCAAAGGTCTGTGATATTCGGTGCTATGCTGTACAGTAAATTCTATATTCT

Associated Phenotype:

Normal

Stage	Entity	Quality	Tag
Larval:Day 5 ZFS:0000037	whole organism ZFA:0001094	quality PATO:0000001	normal PATO:0000461