Busch Lab

ZMP

olfcd1

Ensembl ID:
ENSDARG00000008095
ZFIN ID:
ZDB-GENE-100721-9
Description:
Novel protein similar to vertebrate phermone receptor protein [Source:UniProtKB/TrEMBL;Acc:A3KQM3]
Mouse Orthologues:
AC139131.1, AC161211.1, AC161211.2, Vmn2r54
Mouse Descriptions:
vomeronasal 2, receptor 53 [Source:RefSeq peptide;Acc:NP_001098114]
vomeronasal 2, receptor 54 Gene [Source:MGI Symbol;Acc:MGI:3704110]
vomeronasal 2, receptor 55 [Source:RefSeq peptide;Acc:NP_001098115]
vomeronasal receptor Vmn2r56 [Source:RefSeq peptide;Acc:NP_001098118]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa44890 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa43131 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa43132 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa23324 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa44890
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000028134 Essential Splice Site 360 774 None 5
ENSDART00000099094 Essential Splice Site 416 832 None 7
Genomic Location (Zv9):
Chromosome 18 (position 31443365)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 33240224
GRCz11 18 33214819
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAAATTCTTCACCAACAGCAGCAAAAAGCAATTGCCCACACCACAGAAGG[T/C]ATATTTACAGCAAAATAACGAAATTAACTAACAATGATTTCATGTATATT
Long Flanking Sequence:
GGCAACCACAAAGGTGGTGGTGGCGTTTATGGCATTTGGAGATTTTGTCCTCCTTTTGAAAGTAATGGCACAACAAAACATTACAGGGATACAGTGGATCGGTAGTGAGTCCTGGATAACATCGCGAAATCTTGCAGAAACAAAGGAATACCATTTTCTCTCTGGAGCTGTGGGTTTTGCTATTGCAAATTCCAAACCTGTTGGCCTACGAGAGTTCTTAATGAATGTGCACCCTGATAAAGAGCTAAACAATGAACTTTTAAAAGAATTTTGGGAAACTGTTTTTCTTTGCTCTTTCAGGAACAGCAGCAGTGGTGGATGTACTGGCTCAGAAAAACTGTCAGAGCTTCAGAATGAATACACTGATTTCTCAGAATTACGAATCGAAAATAAAGTATACACTGCTGTGTATGCTGTTGCACATTCTTTGCATAATGTTCTAAAAGGCTTCAAATTCTTCACCAACAGCAGCAAAAAGCAATTGCCCACACCACAGAAGG[T/C]ATATTTACAGCAAAATAACGAAATTAACTAACAATGATTTCATGTATATTTTCTATCATTTTTTCTCCAGGTGTTGGAATATTTGAGAGATGTGAACTTCACTGTCAATACGAATGAGAATATCTTCTTTGATGCAAGTGGTGATCCAGTGGCAAGATACGACTTGGTGAACTGGCAGCCTACTAAGGATGGAAGTCTGCAGTTTAAACTTGTGGGCATCTATGACAGTTCACTGCCTTCAGAGCAACGTCTTCAAATCAATCAGGAATCCATGTTATGGGCAGGAAACAGTGGACAAGTACATCAATATTATATACATTAACAAACTGATGAAGGTTTGAATTATGAAAAAGACAACAATCAAACAACAGTCAGTAAAGTCAATATGACTGCAAATATACAGTAAACACTTATATTTTCACCACTTACAAAAATGGTTTTAAGTCAGCTATTTCTGCCTTTTGGTGATTAAGAAGAACTGTGGCAACATCTCCAAGAGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa43131
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000028134 Essential Splice Site 477 774 4 5
ENSDART00000099094 Essential Splice Site 533 832 6 7
Genomic Location (Zv9):
Chromosome 18 (position 31444296)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 33241155
GRCz11 18 33215750
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGTTATGACTGTATCCCATGCGCAGAGGGAGAAATCAGTAATTATACAG[G/A]TAAAATAGTAGTTGTGAGATACCTCTCATAAAAGTTTGGTGAAGTGTAAA
Long Flanking Sequence:
AAAATGGTTTTAAGTCAGCTATTTCTGCCTTTTGGTGATTAAGAAGAACTGTGGCAACATCTCCAAGAGACTTGAAGAAACCTAACTGTGTGGAGCACTGACTACTGTCTGATGCAAACAAAATGTCACTGGATTATTATAATTAGAATGTTTGTAAATGTAAACCGATATCCCTACTGACCAACAAAAGTTAGAAAAACTGACCTAAAGCAATTTTAGTTGTTGAAAATATAATATTCTAATAATTTTAGCTAACACTATATGAAATTTCTGTTGTGTAATACCTGTAACAAATCATTCCAACAATTGTCAAATAAATCAAGTGGAAGTGAATATCATTAACTAGGGGCTCAACTAAAAATGTATTTTGTTATAGTTGCCTGTGTCCGTGTGCAGTGAGAGCTGTCCCCCTGGAACAAGAAAAGCTGTGCAAAAAGGAAGACCCATCTGCTGTTATGACTGTATCCCATGCGCAGAGGGAGAAATCAGTAATTATACAG[G/A]TAAAATAGTAGTTGTGAGATACCTCTCATAAAAGTTTGGTGAAGTGTAAACCTAGGTCAAGTAATTTGAAATGTATTTTCTACTTGAATAATCTTATCTTGAAATTCTTTCACAGATTCTAGTGACTGTTTTCCTTGTGGTTTGGAGTACTGGTCAAATGAAAGCAAAGACAGATGTGTACTTAAAGTCATTGAATTCCTTTCCTATACAGAAATCATGGGTGTGGGGCTTTGTATTTTCTCCTTCATTGGGGTATTATTAACTGCAACGGTGTCTTTTCTGTTTTATTTTTATAAAGAAACACCTATTGTCAGGGCCAACAACTCAGAGTTGAGCTTCCTGCTGCTCTTCTCATTAACTCTGTGTTTTCTCTGTTCACTTACATTCATTGGTCGTCCCACTGACTGGTCCTGTATGTTGCGTCACACAGCATTTGGGATCACTTTTGTCCTCTGTATTTCCTGTGTTCTGGGGAAAACAATAGTGGTTTTAATGGCATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa43132
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000028134 Essential Splice Site 478 774 4 5
ENSDART00000099094 Essential Splice Site 534 832 6 7
Genomic Location (Zv9):
Chromosome 18 (position 31444297)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 33241156
GRCz11 18 33215751
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTTATGACTGTATCCCATGCGCAGAGGGAGAAATCAGTAATTATACAGG[T/C]AAAATAGTAGTTGTGAGATACCTCTCATAAAAGTTTGGTGAAGTGTAAAC
Long Flanking Sequence:
AAATGGTTTTAAGTCAGCTATTTCTGCCTTTTGGTGATTAAGAAGAACTGTGGCAACATCTCCAAGAGACTTGAAGAAACCTAACTGTGTGGAGCACTGACTACTGTCTGATGCAAACAAAATGTCACTGGATTATTATAATTAGAATGTTTGTAAATGTAAACCGATATCCCTACTGACCAACAAAAGTTAGAAAAACTGACCTAAAGCAATTTTAGTTGTTGAAAATATAATATTCTAATAATTTTAGCTAACACTATATGAAATTTCTGTTGTGTAATACCTGTAACAAATCATTCCAACAATTGTCAAATAAATCAAGTGGAAGTGAATATCATTAACTAGGGGCTCAACTAAAAATGTATTTTGTTATAGTTGCCTGTGTCCGTGTGCAGTGAGAGCTGTCCCCCTGGAACAAGAAAAGCTGTGCAAAAAGGAAGACCCATCTGCTGTTATGACTGTATCCCATGCGCAGAGGGAGAAATCAGTAATTATACAGG[T/C]AAAATAGTAGTTGTGAGATACCTCTCATAAAAGTTTGGTGAAGTGTAAACCTAGGTCAAGTAATTTGAAATGTATTTTCTACTTGAATAATCTTATCTTGAAATTCTTTCACAGATTCTAGTGACTGTTTTCCTTGTGGTTTGGAGTACTGGTCAAATGAAAGCAAAGACAGATGTGTACTTAAAGTCATTGAATTCCTTTCCTATACAGAAATCATGGGTGTGGGGCTTTGTATTTTCTCCTTCATTGGGGTATTATTAACTGCAACGGTGTCTTTTCTGTTTTATTTTTATAAAGAAACACCTATTGTCAGGGCCAACAACTCAGAGTTGAGCTTCCTGCTGCTCTTCTCATTAACTCTGTGTTTTCTCTGTTCACTTACATTCATTGGTCGTCCCACTGACTGGTCCTGTATGTTGCGTCACACAGCATTTGGGATCACTTTTGTCCTCTGTATTTCCTGTGTTCTGGGGAAAACAATAGTGGTTTTAATGGCATTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23324
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000028134 Nonsense 690 774 5 5
ENSDART00000099094 Nonsense 746 832 7 7
Genomic Location (Zv9):
Chromosome 18 (position 31445048)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 33241907
GRCz11 18 33216502
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGGGCTGTTCTGGGTTATACTGGCCTGTTATCAACCTTGTGTTTTGTTT[T/A]AGCTTTTTTTGCTCGAAAACTCCCAGATAACTTCAATGAAGCCAAGTTCA
Long Flanking Sequence:
GGTATTATTAACTGCAACGGTGTCTTTTCTGTTTTATTTTTATAAAGAAACACCTATTGTCAGGGCCAACAACTCAGAGTTGAGCTTCCTGCTGCTCTTCTCATTAACTCTGTGTTTTCTCTGTTCACTTACATTCATTGGTCGTCCCACTGACTGGTCCTGTATGTTGCGTCACACAGCATTTGGGATCACTTTTGTCCTCTGTATTTCCTGTGTTCTGGGGAAAACAATAGTGGTTTTAATGGCATTCAGGGCTACACTTCCAGGAAGTAATGTCATGAAATGGTTTGGGCCTCTTCAACAGAGACTTAGTGTAGTTTCTTTAACATTAATACAGGTGATCATCTGTGTTCTTTGGTTAACAATGTCTCCTCCTTTCCCATTTCTAAATTTGAGTTATTACAGAGAAAAGATCATCCTAGAATGTAACTTAGGTTCAGCTTTTGGTTTCTGGGCTGTTCTGGGTTATACTGGCCTGTTATCAACCTTGTGTTTTGTTT[T/A]AGCTTTTTTTGCTCGAAAACTCCCAGATAACTTCAATGAAGCCAAGTTCATCACTTTCAGCATGCTAATTTTCTGTGCTGTCTGGCTCACATTTATCCCAGCTTATGTCAGTGCTCCTGGAAAATATACTGTTGCTGTGCAATTATTTGCTATTTTAGCTTCTAGTTTTGGTTTACTATTTTGCATATTTGCCCCAAAATGTTACATTATTTTGCTAAAACCTGAAAAAAACACAAAGAAACAAATGATGGGAAAGTCCTAAAACTTGGCACCTTGATTCTTGATCCATAAATTTAAAATGAATTACCAAACCACCCCCAACCACCAACACACACATACAGTATGTATAAATACTGTTTATGTTATGTTTTTTAAAATATTTTTTTAAATTAGTATATTAGTTGTTGAGCAGAGATCAGGGTCCCATGATAAATAAGTAAATAAAAAACACCCATGAATGACAATAAACAGGAAATTAAATTAACAGAATTTTCAGCAGA
Associated Phenotype:
Not determined