Busch Lab

ZMP

si:dkey-217m5.5

Ensembl ID:
ENSDARG00000008060
ZFIN ID:
ZDB-GENE-041014-317
Description:
Novel protein similar to human and mouse scavenger receptor class A, member 3 (SCARA3) [Source:UniPr
Human Orthologue:
SCARA3
Human Description:
scavenger receptor class A, member 3 [Source:HGNC Symbol;Acc:19000]
Mouse Orthologue:
Scara3
Mouse Description:
scavenger receptor class A, member 3 Gene [Source:MGI Symbol;Acc:MGI:2444418]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa12458 Nonsense Available for shipment Available now
sa29429 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa12458
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000002481 Nonsense 137 586 6 7
ENSDART00000146683 Nonsense 129 578 4 5
Genomic Location (Zv9):
Chromosome 20 (position 39322500)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 39394912
GRCz11 20 39297791
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGAAGAAGGAGTTWGAAGAAATCCAGAAGACGATACTCAGTCAAGAGCAA[C/T]AGATGAATGAGGCGACCCAAWCCCAGCAAAGTCTTACACAATCCAGCAAA
Long Flanking Sequence:
TACCCCAGACATGTTCAATAATGTTCATGTCTGGTGACTGGGCTTGCCAATCCTGGAGCACCTTGACCTTCTTTGCTTTCAGGAACTTTGATATGGAGGCTGAAGAATGAGAAGGAGCAATATCCTGCTAAAGAATTTGCCCTCTCCTTTGGTTCTCATAACGTTCCTTCTGTTAAAAATAGGCCTGCTAGATTTATGAAATGTGGGAATCAAATCTCTCGGTTCACTTCCTGTGGTTAATGAACCCCTTAGAGAATAAAATCTCAGGAGGATTTATATATTATAGAAATAATGACCTAAGCAACAGCTGTGCACACACTTTTTAAACTGTATTTTTTGTCAGAGATGCATGATAATCACAATTTGCTTGTTCTTCTGCAGATATCAGAACAGCAAGCAACTATTCCACTTGCTTAGACGTGGCACAGTTCCAAGAGGAGATTGCCAGACTGAAGAAGGAGTTTGAAGAAATCCAGAAGACGATACTCAGTCAAGAGCAA[C/T]AGATGAATGAGGCGACCCAATCCCAGCAAAGTCTTACACAATCCAGCAAAAGAATGGCAAGAGACTTCCAGGCCTTAGGAATGATCATCAAGAGTGTGAACCAGTCTCTGAGCCAGTACCTAAATCAAGTATCTGGCTGGCAGGTTGTAATTAATGAAACCGATCATGGGATGAAAACCCTTGTTGAGGATCAACATGATTTGAAGGCCACAGTGCAGCAAGTCAACACAACTGTCGCCCTTAGTGGATTGTGGATAGGTGCTCTTCAGAGAAAAGCAGAAGAGGAGACCTTGGTGCTTCAAAAAATAACAGCAGACTGGCAGAATTACAGCAGAGTTTTAAGCACCCTGAAGACCAATACAAGTATAACCATGCAGAACCTGAGGGTTGTTCAAAATAGCATCTCTGCCACTCAGCAACGTATCAGTACGAGTTCAGAGATGGTGCATGACCTCACTCTGCAAGTCATGAACCTTCAGATGCAACTAGACAATGTTTCG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa29429
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000002481 Nonsense 323 586 6 7
ENSDART00000146683 Nonsense 315 578 4 5
Genomic Location (Zv9):
Chromosome 20 (position 39323060)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 39395472
GRCz11 20 39298351
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GACGAGCACGAGGAGAACATGCATGACCACCAGTACCACGCCAAGTATTA[T/A]GAGAACCGTACTGGGGAGCGATTTGTCACTTTGGATGCAAGAATGGACTC
Long Flanking Sequence:
AGAGACTTCCAGGCCTTAGGAATGATCATCAAGAGTGTGAACCAGTCTCTGAGCCAGTACCTAAATCAAGTATCTGGCTGGCAGGTTGTAATTAATGAAACCGATCATGGGATGAAAACCCTTGTTGAGGATCAACATGATTTGAAGGCCACAGTGCAGCAAGTCAACACAACTGTCGCCCTTAGTGGATTGTGGATAGGTGCTCTTCAGAGAAAAGCAGAAGAGGAGACCTTGGTGCTTCAAAAAATAACAGCAGACTGGCAGAATTACAGCAGAGTTTTAAGCACCCTGAAGACCAATACAAGTATAACCATGCAGAACCTGAGGGTTGTTCAAAATAGCATCTCTGCCACTCAGCAACGTATCAGTACGAGTTCAGAGATGGTGCATGACCTCACTCTGCAAGTCATGAACCTTCAGATGCAACTAGACAATGTTTCGTCTTACATTGACGAGCACGAGGAGAACATGCATGACCACCAGTACCACGCCAAGTATTA[T/A]GAGAACCGTACTGGGGAGCGATTTGTCACTTTGGATGCAAGAATGGACTCCATTGAACATGAGATTGACACAATCTCTTCCAGCATTAATGCAACCGTCAACCATGTTCAAAGCATGTACAAATACATCAACATGGAGAGCTCATCTTGCCAATCCAGACTGGGCAGTCACACGGAGGATTTGCAGAACCTAAACAACACAGTCTTGCTTCTTCTTCACCTAGCTGATACTCTAAGATTGCAGCACATGATGCTGAATGAACGTCTCGAAAATGATGTAAGGAGTCTCACTGTGGTGACGGAGGAGATGAAGCTGGTAGACACCAGTCATGCAGAACTGATCCAAAACTTCACAATTCTTAAAGGTGGTTATTAACCTGTAGTCCAGAGTTTCTCAAATCTTACCATGTAGAGCAGGGATTTCAAAATAAGTTCCTGGAGAGACCTGCAAAGTTTAGTTCCAATCCTGCTTTAACACACTTACTTGTAGGTTTCAAACAA
Associated Phenotype:
Not determined