Busch Lab

ZMP

sart3

Ensembl ID:
ENSDARG00000008032
ZFIN ID:
ZDB-GENE-040724-10
Description:
squamous cell carcinoma antigen recognized by T-cells 3 [Source:RefSeq peptide;Acc:NP_001025289]
Human Orthologue:
SART3
Human Description:
squamous cell carcinoma antigen recognized by T cells 3 [Source:HGNC Symbol;Acc:16860]
Mouse Orthologue:
Sart3
Mouse Description:
squamous cell carcinoma antigen recognized by T-cells 3 Gene [Source:MGI Symbol;Acc:MGI:1858230]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa31425 Essential Splice Site Available for shipment Available now
sa6968 Nonsense Mutation detected in F1 DNA Not yet available
sa33571 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa31425
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000008402 Essential Splice Site 66 951 None 19
ENSDART00000122342 Essential Splice Site 66 622 None 16
ENSDART00000124545 Essential Splice Site 66 951 None 20
ENSDART00000125403 Essential Splice Site 66 586 None 16
Genomic Location (Zv9):
Chromosome 5 (position 22237498)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 19950370
GRCz11 5 20454170
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGAGGACGAGCGGGAGAATGAAGCCGAGATCCAGCGGCTGGAGGAGCAGG[T/G]GAGGAATGAATGAGGCTAAAGGCGCTCCTACTCACATACGCAGCTCCCAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa6968
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000008402 Nonsense 220 951 5 19
ENSDART00000122342 Nonsense 220 622 5 16
ENSDART00000124545 Nonsense 220 951 6 20
ENSDART00000125403 Nonsense 220 586 5 16
Genomic Location (Zv9):
Chromosome 5 (position 22243353)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 19956225
GRCz11 5 20460025
KASP Assay ID:
554-4993.1 (used for ordering genotyping assays)
KASP Sequence:
TTCTCAGCCTCCTCCTGGCACTGTTCCATCACAAGAGCAGCAGGAACTGT[T/A]GAGCGCACAGCTCGAGCGCATACACACACTCTTCAGACGGCAGCTAGCTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa33571
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000008402 Nonsense 523 951 13 19
ENSDART00000122342 Nonsense 523 622 13 16
ENSDART00000124545 Nonsense 523 951 14 20
ENSDART00000125403 Nonsense 523 586 13 16
Genomic Location (Zv9):
Chromosome 5 (position 22254759)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 19967631
GRCz11 5 20471431
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACTGCAGGAAGGCTCTTCACAGAGCAGTACAGTGTACATCAGACTACCCT[G/T]AGCACGTGTGTGATGTCCTGCTCAACTTTGAAAGAGTGGAAGGTCAGCTT
Associated Phenotype:
Not determined