Busch Lab

ZMP

itga11b

Ensembl ID:
ENSDARG00000007950
ZFIN ID:
ZDB-GENE-071009-4
Human Orthologue:
ITGA11
Human Description:
integrin, alpha 11 [Source:HGNC Symbol;Acc:6136]
Mouse Orthologue:
Itga11
Mouse Description:
integrin alpha 11 Gene [Source:MGI Symbol;Acc:MGI:2442114]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa8853 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa5994 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa44212 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa8853
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000022861 Essential Splice Site 570 1164 13 29
Genomic Location (Zv9):
Chromosome 25 (position 1339918)
Other Location(s):
Assembly Chromosome Position
GRCz10 25 1292388
GRCz11 25 1373033
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTACCTCTTCTACGGGCTGAAAAACAGCATACAAACCAAATATAAACAG[G/A]TACGAGTTAACTRAGAGTGACTGATAKTTRATAAACATGAATGAACCACA
Long Flanking Sequence:
GTAAATATTACTTAGGTCTATATTTGTTATATAGGTTATGTTAATGTTATCTTATTAGCATTAAATACAATACTAATGGATTTTGATTTTAAAGAGATATATAAGATTAACTAAGATATTAACATCACCCATTCTTTGCAAGTAGTTTTCATTATCAGATGAGTTTGACTAACGTTAGCAGTCGGATCCTTATTTTTTAACTAGTGTTCATGAACAATAAATCAGAGAGGTTTCAATCACATTTTCAGGATAGTCATAAACTATAATACCATGTTAAATGTCTGTTTATTATACAGGGCTCTTTTATACCAGATGGGACTCTTGGTCCGTCAGAACATTCCCATGATTCTCGGTTTGGGGCGGCCATGTCGGCTCTTCCGGATCTGAATGGTGACGGTTTCAGCGAGCTGGTAGTCGGTGCACCATTGGAGGACAACCACAGAGGAGCCATTTACCTCTTCTACGGGCTGAAAAACAGCATACAAACCAAATATAAACAG[G/A]TACGAGTTAACTGAGAGTGACTGATAGTTAATAAACATGAATGAACCACATTCCAGTCAGGCCAAATACAAAATATTCGCTCATATTTATTTTTCATTTGTTAACGTATTTAATTAAATTCAATTCAGCTTTATTTGTATAGCGCTTTTACAATGTAGATTGTGTCAAAGCAGCTTCACATAAATGGTCATAGTAACTGGATCAGGGTAGTTCAGTTTTTAGTGTTTGAGTTCAGTTCAGTTTAGCTCAGTTCAGTGTGGTTTAAAGTCATTACTGAGAGTCCAAACACTGAAGAGCAAATTCATCTGCAAATTCATTTAATAAGTATGAACAAAGATTGTACCATATATATTGATTTATTAATCATAGTTAAGACAACACAATGATTTTTAGCCATCATCTGTTCATTTTCTTATGCAAATGTGTGTAAATATACATGTGTTCAGGTTTTTGTATTAATTTTAATAATATACTGAAAGACTAATATGCAAATGTTTGTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa5994
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000022861 Essential Splice Site 1070 1164 26 29
ENSDART00000022861 Essential Splice Site 1070 1164 26 29
Genomic Location (Zv9):
Chromosome 25 (position 1362980)
Other Location(s):
Assembly Chromosome Position
GRCz10 25 1269326
GRCz11 25 1349971
KASP Assay ID:
554-3949.1 (used for ordering genotyping assays)
KASP Sequence:
ACGTTAGCATCACCGTCACAGGATGGCTCAATCTTCACACTTTATTAGCC[G/A]TGAGTATGTTAGAAATAAGTAACGAATAACTGACAAAAATGAGTTTGTCT
Long Flanking Sequence:
CTTTCTCAAAAAACTGAGTTTGCATTTCTCAACGCTGACTTTTGTCCTGAAATTGCATCTTTTTTGGAGGAAATTCAGACTGTTTTTTTATTCAGAAATTACATGTCAATTCAGATCTCTTTATTTTCTTTTTATTCTCTACTAAATGCGTTCATCTGCATTCACAAAGCAGCAAAATGCAAAACTAACAGTGCTAATTAATCAAACTACTCAAGCTGCTTTATCACTCGCTGTTGGCTACAGATAGCATAATTATTCATATGCAGTCTATATGTGCTCCAAATTGGAAATGATCCATTCACAGCTTCCTCTCTGGCACATTCACTTTCCAAGTGCTACGTGATCAAAAGCATTTAATGTCCTCCATATTGTGTTGTTTGTGTTGACAGAACGCCTCCACCAGTGACGCATTATTAGCACAGTGCCGATTCAACCTGTCTCCACAAGCAGACGTTAGCATCACCGTCACAGGATGGCTCAATCTTCACACTTTATTAGCC[G/A]TGAGTATGTTAGAAATAAGTAACGAATAACTGACAAAAATGAGTTTGTCTGACAATTATGACTTTTTTTACGTCGCACAATTTTGTCTTTGTCTTTGAAATTTTTTCATTTTTTCATAATTATTGACTTTATGAATTATCTCGTAATGTTTTATTAATTGAGATTACAGCTCGTAATTTGTATGTTTTTTAATTGAGTTTACATCTCGTAATTTGTACGTTTTTTTATTGAGTTTAAATCTCGTACTTTGTATTTTTTTTGAGTTTACATCTTGTAATTTGTATTTTTTTTATTGAGTTTACATTTCGTAATTTGTAAGTTTTTTAATTGAGTTTACATCTCGTAATTTGTATGTTTTTTGAGTTTACATCTCGTAATTTGTACGTTTTTTTAATTGAGTTTACATCTCGTAATTTGTATTTTTTTATTGAGTTTACATCTTGTAATTTGTATTTTTTTTATTGAGTTTACATTTCGTAATTTGTAAGTTTTTTAATTGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa44212
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000022861 Essential Splice Site 1070 1164 26 29
ENSDART00000022861 Essential Splice Site 1070 1164 26 29
Genomic Location (Zv9):
Chromosome 25 (position 1362980)
Other Location(s):
Assembly Chromosome Position
GRCz10 25 1269326
GRCz11 25 1349971
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACGTTAGCATCACCGTCACAGGATGGCTCAATCTTCACACTTTATTAGCC[G/T]TGAGTATGTTAGAAATAAGTAACGAATAACTGACAAAAATGAGTTTGTCT
Long Flanking Sequence:
CTTTCTCAAAAAACTGAGTTTGCATTTCTCAACGCTGACTTTTGTCCTGAAATTGCATCTTTTTTGGAGGAAATTCAGACTGTTTTTTTATTCAGAAATTACATGTCAATTCAGATCTCTTTATTTTCTTTTTATTCTCTACTAAATGCGTTCATCTGCATTCACAAAGCAGCAAAATGCAAAACTAACAGTGCTAATTAATCAAACTACTCAAGCTGCTTTATCACTCGCTGTTGGCTACAGATAGCATAATTATTCATATGCAGTCTATATGTGCTCCAAATTGGAAATGATCCATTCACAGCTTCCTCTCTGGCACATTCACTTTCCAAGTGCTACGTGATCAAAAGCATTTAATGTCCTCCATATTGTGTTGTTTGTGTTGACAGAACGCCTCCACCAGTGACGCATTATTAGCACAGTGCCGATTCAACCTGTCTCCACAAGCAGACGTTAGCATCACCGTCACAGGATGGCTCAATCTTCACACTTTATTAGCC[G/T]TGAGTATGTTAGAAATAAGTAACGAATAACTGACAAAAATGAGTTTGTCTGACAATTATGACTTTTTTTACGTCGCACAATTTTGTCTTTGTCTTTGAAATTTTTTCATTTTTTCATAATTATTGACTTTATGAATTATCTCGTAATGTTTTATTAATTGAGATTACAGCTCGTAATTTGTATGTTTTTTAATTGAGTTTACATCTCGTAATTTGTACGTTTTTTTATTGAGTTTAAATCTCGTACTTTGTATTTTTTTTGAGTTTACATCTTGTAATTTGTATTTTTTTTATTGAGTTTACATTTCGTAATTTGTAAGTTTTTTAATTGAGTTTACATCTCGTAATTTGTATGTTTTTTGAGTTTACATCTCGTAATTTGTACGTTTTTTTAATTGAGTTTACATCTCGTAATTTGTATTTTTTTATTGAGTTTACATCTTGTAATTTGTATTTTTTTTATTGAGTTTACATTTCGTAATTTGTAAGTTTTTTAATTGA
Associated Phenotype:
Not determined