ZMP
sub1
Ensembl ID:
ZFIN ID:
Description:
RNA polymerase II transcriptional coactivator [Source:RefSeq peptide;Acc:NP_001002505]
Human Orthologue:
SUB1
Human Description:
SUB1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:19985]
Mouse Orthologue:
Sub1
Mouse Description:
SUB1 homolog (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:104811]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa25310 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa44614 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa25310
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000011229 | Nonsense | 113 | 124 | 5 | 5 |
Genomic Location (Zv9):
Chromosome 5 (position 42769457)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 40550722 |
| GRCz11 | 5 | 41150875 |
KASP Assay ID:
554-7830.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTCCTCAGGCATTTCATTGAACCCTGAGCAGTGGAGTCAGCTGAAGGAA[C/T]AAATGTCGGACATCGATGATGCTATTAAAAGATATTAAGATGTCTTTGTG
Long Flanking Sequence:
TATCTTTGCTCCCCACACTTTCCTATCTGTAAAATCTTCACAGTCCTATCTCAATAAAGGTAAAAACAGAAAAAAACAGGTGTAAACTGGGCCAGTGCTTTAGTGTTTGTTAATCAAAAGTAAAGCATGACTAATTGTAGAGCTGTTATTTACTGGTGCTCATATGAATTTTCATTTGTCCATTCCATGTTGTGAAATGTGACAGATTGGGAAACTGAGATACGTCAGTGTAAGGGATTTCAAAGGCAAGGTCTTGATCGACATCCGAGAGTATTGGATGGATCAGGCTGGTGAGATGAAGCCTGGAAAAAAAGGTAATCAGAGCCCACAAATTTTTATGGCTTATTTTTGTTTAAAATCTTAGTCGAGCACATATCCACAAGTGCCAGTGAAATGCTTCCTTTGATTTCTGTGCTGTGGTTAATTTTGCTTGATCCGTTGTATTGAATTTCTCCTCAGGCATTTCATTGAACCCTGAGCAGTGGAGTCAGCTGAAGGAA[C/T]AAATGTCGGACATCGATGATGCTATTAAAAGATATTAAGATGTCTTTGTGAAGTGAATGATTGGCTGGTTCTTTTTAGAGTTCTGCACTTTGGTACACAGGGGATTTAACAAACGTTTCCTGTGACTCGATAGTATGTGTGAAAAGTTTAAAGACACCTCTTTGGTTTTGGTTTTTGTTTATTTCCAACTGTCTGTTGTTAAATGTTGATGTGTGGGTGATTATTTTAATAGTTTGATAGCCAGTGTTCTCACGCTCTGCCGATGTAATAAAGGCTTTTCTTGGTTTAGAGTTTTCAGCGTGTCATTCCGAGTATGATTTCATTGAACTGCACCTACTCTCTGTAAAAATGTTTACCATGTTGTGATGTTCCCTTTAGTAAAAAATAGAGTTTTTCCAACTCAAAGTTGTTGTATGATCCTGACAATAAACAGAGCAGTAATGGATGACCTAAAATGAAGGCGTTTGGCACTTCATGATGCTTGTTGTGTCCAGTCCCGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa44614
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000011229 | Nonsense | 124 | 124 | 5 | 5 |
Genomic Location (Zv9):
Chromosome 5 (position 42769492)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 40550757 |
| GRCz11 | 5 | 41150910 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGTCAGCTGAAGGAACAAATGTCGGACATCGATGATGCTATTAAAAGATA[T/G]TAAGATGTCTTTGTGAAGTGAATGATTGGCTGGTTCTTTTTAGAGTTCTG
Long Flanking Sequence:
CTTCACAGTCCTATCTCAATAAAGGTAAAAACAGAAAAAAACAGGTGTAAACTGGGCCAGTGCTTTAGTGTTTGTTAATCAAAAGTAAAGCATGACTAATTGTAGAGCTGTTATTTACTGGTGCTCATATGAATTTTCATTTGTCCATTCCATGTTGTGAAATGTGACAGATTGGGAAACTGAGATACGTCAGTGTAAGGGATTTCAAAGGCAAGGTCTTGATCGACATCCGAGAGTATTGGATGGATCAGGCTGGTGAGATGAAGCCTGGAAAAAAAGGTAATCAGAGCCCACAAATTTTTATGGCTTATTTTTGTTTAAAATCTTAGTCGAGCACATATCCACAAGTGCCAGTGAAATGCTTCCTTTGATTTCTGTGCTGTGGTTAATTTTGCTTGATCCGTTGTATTGAATTTCTCCTCAGGCATTTCATTGAACCCTGAGCAGTGGAGTCAGCTGAAGGAACAAATGTCGGACATCGATGATGCTATTAAAAGATA[T/G]TAAGATGTCTTTGTGAAGTGAATGATTGGCTGGTTCTTTTTAGAGTTCTGCACTTTGGTACACAGGGGATTTAACAAACGTTTCCTGTGACTCGATAGTATGTGTGAAAAGTTTAAAGACACCTCTTTGGTTTTGGTTTTTGTTTATTTCCAACTGTCTGTTGTTAAATGTTGATGTGTGGGTGATTATTTTAATAGTTTGATAGCCAGTGTTCTCACGCTCTGCCGATGTAATAAAGGCTTTTCTTGGTTTAGAGTTTTCAGCGTGTCATTCCGAGTATGATTTCATTGAACTGCACCTACTCTCTGTAAAAATGTTTACCATGTTGTGATGTTCCCTTTAGTAAAAAATAGAGTTTTTCCAACTCAAAGTTGTTGTATGATCCTGACAATAAACAGAGCAGTAATGGATGACCTAAAATGAAGGCGTTTGGCACTTCATGATGCTTGTTGTGTCCAGTCCCGAGTGTTTGTGTGTAATTTGCTTGCCTTCGCGTGGGA
Associated Phenotype:
Not determined