Busch Lab

ZMP

LOC567441

Ensembl ID:
ENSDARG00000007467
Human Orthologues:
IFIT1, IFIT1B, IFIT2, IFIT3, IFIT5
Human Descriptions:
interferon-induced protein with tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:5407]
interferon-induced protein with tetratricopeptide repeats 1B [Source:HGNC Symbol;Acc:23442]
interferon-induced protein with tetratricopeptide repeats 2 [Source:HGNC Symbol;Acc:5409]
interferon-induced protein with tetratricopeptide repeats 3 [Source:HGNC Symbol;Acc:5411]
interferon-induced protein with tetratricopeptide repeats 5 [Source:HGNC Symbol;Acc:13328]
Mouse Orthologues:
2010002M12Rik, Gm14446, I830012O16Rik, Ifit1, Ifit2, Ifit3
Mouse Descriptions:
RIKEN cDNA 2010002M12 gene Gene [Source:MGI Symbol;Acc:MGI:2148249]
RIKEN cDNA I830012O16 gene Gene [Source:MGI Symbol;Acc:MGI:3698419]
interferon-induced protein with tetratricopeptide repeats 1 Gene [Source:MGI Symbol;Acc:MGI:99450]
interferon-induced protein with tetratricopeptide repeats 2 Gene [Source:MGI Symbol;Acc:MGI:99449]
interferon-induced protein with tetratricopeptide repeats 3 Gene [Source:MGI Symbol;Acc:MGI:1101055]
predicted gene 14446 Gene [Source:MGI Symbol;Acc:MGI:3650685]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa38879 Nonsense Mutation detected in F1 DNA Not yet available
sa6246 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa38879
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000018922 Nonsense 265 482 1 1
Genomic Location (Zv9):
Chromosome 12 (position 18093730)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 16904904
GRCz11 12 17026778
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CACCAGATCACCCACATGTCATGCGATATGTTGGGAAATTCTTTAGGAAC[A/T]AAGGGTGTGTTGATAGGTCAATTGATCTGTTGAAGAGAGCACTTGAACGT
Long Flanking Sequence:
GAACTCTCATTGTCACTTATGGAAACCTTGCCTGGTTAAACTACCACATGAAGAACTACACAGAGTGTGAAAGTTACCTAAATAGTCTTCAGAGGATAAACGAAACATCTCCTGCTGAGTTTTCATCGATTCCAGAGGTGCTTGGTGAGAAGGGATGGACTTTCCTTAAATTCTCACGCAAATATTATGACGGAGCCAAAGAGTGTTTCAGGAAGGCTGTAGAATTGGAACCAGAAGAACCTGAGTGGCACACTGGTTATGCCATTGCTCTGTACCGTACTGAATTTGAGAGTACGGTTTTAGAAGATTCAGCTACAGTCAAGCAGCTAAGACTGGCCATTGAGATGAATCCAGATGATGACGTTCTCAAGGTTCTCTTAAGCTTGCGACTGATTGTTTACAAGAGGTACGGGGAGGCTGAAAGCTGGGTAGAAAAGGCTTTAGAAAAATCACCAGATCACCCACATGTCATGCGATATGTTGGGAAATTCTTTAGGAAC[A/T]AAGGGTGTGTTGATAGGTCAATTGATCTGTTGAAGAGAGCACTTGAACGTTCACCCAATTCAAGTTTCATACATCATCAGCTTGCTCTTTGCTACAAGTACAAGAAAATCCAAGTTCTGCAAGAACAAAGTCACCATGCCCGAGGATCAAGAGTTCAACAGCTTCGTGATCAGTGCATATTTCATTTAGAAAAGGCCACCAGCCTGACAACCTCCTTTATTTCTGCAATGAGCGATCTAGCACTACAGTATGGAGAGAATGGTGACATACCTCGGGCAGAGGAGCTGTTTCAGGTCACTTTCAAAATTGCAAAAGAGAAAAATGACGGTTTACATGTGGTCAACTACTATTATGCTGAATACCAGTTGTACTGCCACAGATGTGAGCCATTAGCTGTCCAACACTACATGGAATGTCTGAAGATGTGCCCAAAATCTGTTGAAGGCAGGATAAGTTCCACTAGAATGAAGAAGACTGCTGAGAAATGGATTGACAGAAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa6246
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000018922 Nonsense 478 482 1 1
Genomic Location (Zv9):
Chromosome 12 (position 18093091)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 16904265
GRCz11 12 17026139
KASP Assay ID:
554-4692.1 (used for ordering genotyping assays)
KASP Sequence:
CCTTGAGTTATGAAGACAATAATGAGTTCCTCAGAAACCTCAGGGAACTC[A/T]GACTGTCTTTACTGTAAAGTCATAACAAATTATTGCTTTCACAATCTGAT
Long Flanking Sequence:
CCCGAGGATCAAGAGTTCAACAGCTTCGTGATCAGTGCATATTTCATTTAGAAAAGGCCACCAGCCTGACAACCTCCTTTATTTCTGCAATGAGCGATCTAGCACTACAGTATGGAGAGAATGGTGACATACCTCGGGCAGAGGAGCTGTTTCAGGTCACTTTCAAAATTGCAAAAGAGAAAAATGACGGTTTACATGTGGTCAACTACTATTATGCTGAATACCAGTTGTACTGCCACAGATGTGAGCCATTAGCTGTCCAACACTACATGGAATGTCTGAAGATGTGCCCAAAATCTGTTGAAGGCAGGATAAGTTCCACTAGAATGAAGAAGACTGCTGAGAAATGGATTGACAGAAAATCGCAGGAAGGGAAAGCTTATGGTATGCTAGCATTTCTTCATAAGGTAAAAGGAGAGATAGCTCAAGCCATTGAGTGCTATGAGAAAGCCTTGAGTTATGAAGACAATAATGAGTTCCTCAGAAACCTCAGGGAACTC[A/T]GACTGTCTTTACTGTAAAGTCATAACAAATTATTGCTTTCACAATCTGATGTACAGTATTCAGTATGCATTTGTGCATCACTGGCACTTTATGGTTATCTACTTTTTGACACTTTATGACTTGCTGATTATTTTCTATTTATTCTGTGTTAATTTAAAGGTAGTTCAACACAAAAAAATTAAGAGTTTGTCTCTTAACAACTGTCTCCATCCATTTATTTTTTCTTTCTTCTGTTCAACACAAAAGATATTTTGAACAATGTTATTAACCATACAGTTTACAGTCAGGCAAAGCAGAATATTGCTGTTTTTCTTTCTGTCAGTGAAATATTCCTTTAAATAATCTGTTACTTTATCAAAAAGCACTACATTAAACACCGAAATCTAAGAAGCTGAAATAAAAATGTAAATGTATATAGCGTTTTTTTTGTCTGTCTTTATATTTTTGTCTAAAGGATTTATTCATACAGATCAAAAACTTCATAGATGGTGAATAATTTC
Associated Phenotype:
Not determined