ZMP
gbas
Ensembl ID:
ZFIN ID:
Description:
Protein NipSnap homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9PU58]
Human Orthologue:
GBAS
Human Description:
glioblastoma amplified sequence [Source:HGNC Symbol;Acc:4179]
Mouse Orthologue:
Gbas
Mouse Description:
glioblastoma amplified sequence Gene [Source:MGI Symbol;Acc:MGI:1278343]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa44815 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa24970 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa44815
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000122582 | Nonsense | 14 | 286 | 1 | 11 |
Genomic Location (Zv9):
Chromosome 15 (position 454648)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 494951 |
| GRCz11 | 15 | 404932 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGTGGAAGATGGCGACCAGAGTCCTTCACAGCTCCTGCTCCGGCCTGTA[T/A]CGGGCTGCAGGACCGGCCCGGGGCAAAGGACACGCGACTGCCGTTATCAG
Long Flanking Sequence:
CTGATTTTATTCAACAAAACTAGCATGAGCCGAGTGTTTAGTGTGAGTTGGAGCTACTTGCCATATGGTGAATGCAGTAAGGGACTGTTATCATCAATAACATTACCTGTGTAGCACAAAAGTTCAGAACATACAAAAACGTAAACAATTAAACCTTACCTATGTAATGTTCTGCCTCTGAGCTTTGTTTGCTCGTTACTACACCTGTAGACAGCACTAAAGTCCAGCATCTTCACTTAATAACACTGTCTTGGCTAGTGCGGTTGAATGACGCTTGTCCTGGGAGCACTGTACAAATATGGCGACGCTATTGACGCATGCTCAGGGTCCCTATGCGATATCTAGTGTATACATCTATGCGCTGTGTGTGTGTGGTTCTGCAGGCCTCTGGTGGCGGCGCCGGTGAACTGCAGCGGTTTAACCGTGCACGCGCTGCTGTTTGTGTGCTATCAGTGGAAGATGGCGACCAGAGTCCTTCACAGCTCCTGCTCCGGCCTGTA[T/A]CGGGCTGCAGGACCGGCCCGGGGCAAAGGACACGCGACTGCCGTTATCAGGTCGGCCTCTTTATCTGCATTAGCCGCTGTAAAACCGCTAGCGTTAGCATTGCGCTTTAGCAACAAGCGAGCCGCCGATAAACCAGTGTGCTGACGGGGAAAACAGATAACACTAGCAGCTCACCACTGATCTGAGCACAGTTAGCTACTGTTTACCTCCACTAATCAGTGTTCTGGTGTGTGTTTACTGCCGTGTGAGTGACTGACGGAGTGTGTGCTGAGAGCGAATCTGCGGCTCAAGGTCATCATTCAGTTATGAACAACTTATGATGACGTCACGATATCACAAACACACCATCATCATCATCATCATCATCATCAGACACACTGTGCAGCTGCAGAGTTACTGTACACAGCCTGTTCATGTGCTCATGTTAAACACAGTGTGTGTGTGACTGAGGGGCAGCTGCTTATACTCCCTCACACATGAACACTGATGATGTTGTTTAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa24970
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000122582 | Essential Splice Site | None | 286 | None | 11 |
Genomic Location (Zv9):
Chromosome 15 (position 464225)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 504528 |
| GRCz11 | 15 | 413960 |
KASP Assay ID:
554-7840.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGATATGATTCTGCTCTGATTATTGATGATGTTTTCTGTATGTGTGTGTG[T/A]GAGACGGCCGCATGCACACACACTCTACATTACGCCGCTCATCTGTTAAT
Long Flanking Sequence:
TCTGTTGTTGTGTGCAGTGCCGCTGATTCAGCACATGGAGTCCAGGATCATGATCCCACTGAAGAACTCTCCACTGAAGTAACACACACACACACACAGCGCTGCTGCGTCCCCGTCAGATGAAGACAGACAGCAGACCCTCCACTGCCGAGATCATTCGGATCAACACACACACACACACACACACATACACACACGCACAGCTGACGCTGCAGACAGGACAAACACAGCCACTCATCAGTCAAATAAAGTTCAGCTGCACGGTTTAGAGGAGGAGAACATGACGGAGCGCTCTCGAACACCGCCGGCAGCCGTCAGTCTGTATTTATTGCATATTTATTAGCTGTACATGTACACCACACAGATCTGAGGTCAGATGAGCCGCGCTGCAGACGTCTGCTTTACTGTTACTGCATTGGATTTCTCTTGTGTTCTACATAGATGTGTGTTTGATATGATTCTGCTCTGATTATTGATGATGTTTTCTGTATGTGTGTGTG[T/A]GAGACGGCCGCATGCACACACACTCTACATTACGCCGCTCATCTGTTAATCAATAAACAACATCTCCATATTAAAATCAGCTCTGTGTGCTGCTGCGTTTATTACATACAGCATCCTGAGAAACTAAAACACGTGAGGATTAAAAGTGTGTGTTATTGAGGCTAGTAAAGGCACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCAGATCTTGTCCAGTTCTTTACTGAGCTCAGAGAAGCTGCTGACGTACCATGAGCTCTTCTCCTTCACCTGCGGGCGCAGCACATTCCCTCCGAACCCGATGAAGGCGCTCTGAAACACACAACACAACAACATTGGAGATCTCACACACACACACACACACACACACACCTTGTGCAAATCTGTAGTTTGATCCGGGATTCTCCACGTCAGAGTTCAGACTGTAATGAAGATGTCAGACTACAGAGATAAACTTGAGGACTTTTACTTGCCCC
Associated Phenotype:
Not determined