Busch Lab

ZMP

gbas

Ensembl ID:
ENSDARG00000007264
ZFIN ID:
ZDB-GENE-991008-18
Description:
Protein NipSnap homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9PU58]
Human Orthologue:
GBAS
Human Description:
glioblastoma amplified sequence [Source:HGNC Symbol;Acc:4179]
Mouse Orthologue:
Gbas
Mouse Description:
glioblastoma amplified sequence Gene [Source:MGI Symbol;Acc:MGI:1278343]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa44815 Nonsense Mutation detected in F1 DNA Not yet available
sa24970 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa44815
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000122582 Nonsense 14 286 1 11
Genomic Location (Zv9):
Chromosome 15 (position 454648)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 494951
GRCz11 15 404932
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGTGGAAGATGGCGACCAGAGTCCTTCACAGCTCCTGCTCCGGCCTGTA[T/A]CGGGCTGCAGGACCGGCCCGGGGCAAAGGACACGCGACTGCCGTTATCAG
Long Flanking Sequence:
CTGATTTTATTCAACAAAACTAGCATGAGCCGAGTGTTTAGTGTGAGTTGGAGCTACTTGCCATATGGTGAATGCAGTAAGGGACTGTTATCATCAATAACATTACCTGTGTAGCACAAAAGTTCAGAACATACAAAAACGTAAACAATTAAACCTTACCTATGTAATGTTCTGCCTCTGAGCTTTGTTTGCTCGTTACTACACCTGTAGACAGCACTAAAGTCCAGCATCTTCACTTAATAACACTGTCTTGGCTAGTGCGGTTGAATGACGCTTGTCCTGGGAGCACTGTACAAATATGGCGACGCTATTGACGCATGCTCAGGGTCCCTATGCGATATCTAGTGTATACATCTATGCGCTGTGTGTGTGTGGTTCTGCAGGCCTCTGGTGGCGGCGCCGGTGAACTGCAGCGGTTTAACCGTGCACGCGCTGCTGTTTGTGTGCTATCAGTGGAAGATGGCGACCAGAGTCCTTCACAGCTCCTGCTCCGGCCTGTA[T/A]CGGGCTGCAGGACCGGCCCGGGGCAAAGGACACGCGACTGCCGTTATCAGGTCGGCCTCTTTATCTGCATTAGCCGCTGTAAAACCGCTAGCGTTAGCATTGCGCTTTAGCAACAAGCGAGCCGCCGATAAACCAGTGTGCTGACGGGGAAAACAGATAACACTAGCAGCTCACCACTGATCTGAGCACAGTTAGCTACTGTTTACCTCCACTAATCAGTGTTCTGGTGTGTGTTTACTGCCGTGTGAGTGACTGACGGAGTGTGTGCTGAGAGCGAATCTGCGGCTCAAGGTCATCATTCAGTTATGAACAACTTATGATGACGTCACGATATCACAAACACACCATCATCATCATCATCATCATCATCAGACACACTGTGCAGCTGCAGAGTTACTGTACACAGCCTGTTCATGTGCTCATGTTAAACACAGTGTGTGTGTGACTGAGGGGCAGCTGCTTATACTCCCTCACACATGAACACTGATGATGTTGTTTAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa24970
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000122582 Essential Splice Site None 286 None 11
Genomic Location (Zv9):
Chromosome 15 (position 464225)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 504528
GRCz11 15 413960
KASP Assay ID:
554-7840.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGATATGATTCTGCTCTGATTATTGATGATGTTTTCTGTATGTGTGTGTG[T/A]GAGACGGCCGCATGCACACACACTCTACATTACGCCGCTCATCTGTTAAT
Long Flanking Sequence:
TCTGTTGTTGTGTGCAGTGCCGCTGATTCAGCACATGGAGTCCAGGATCATGATCCCACTGAAGAACTCTCCACTGAAGTAACACACACACACACACAGCGCTGCTGCGTCCCCGTCAGATGAAGACAGACAGCAGACCCTCCACTGCCGAGATCATTCGGATCAACACACACACACACACACACACATACACACACGCACAGCTGACGCTGCAGACAGGACAAACACAGCCACTCATCAGTCAAATAAAGTTCAGCTGCACGGTTTAGAGGAGGAGAACATGACGGAGCGCTCTCGAACACCGCCGGCAGCCGTCAGTCTGTATTTATTGCATATTTATTAGCTGTACATGTACACCACACAGATCTGAGGTCAGATGAGCCGCGCTGCAGACGTCTGCTTTACTGTTACTGCATTGGATTTCTCTTGTGTTCTACATAGATGTGTGTTTGATATGATTCTGCTCTGATTATTGATGATGTTTTCTGTATGTGTGTGTG[T/A]GAGACGGCCGCATGCACACACACTCTACATTACGCCGCTCATCTGTTAATCAATAAACAACATCTCCATATTAAAATCAGCTCTGTGTGCTGCTGCGTTTATTACATACAGCATCCTGAGAAACTAAAACACGTGAGGATTAAAAGTGTGTGTTATTGAGGCTAGTAAAGGCACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCAGATCTTGTCCAGTTCTTTACTGAGCTCAGAGAAGCTGCTGACGTACCATGAGCTCTTCTCCTTCACCTGCGGGCGCAGCACATTCCCTCCGAACCCGATGAAGGCGCTCTGAAACACACAACACAACAACATTGGAGATCTCACACACACACACACACACACACACACCTTGTGCAAATCTGTAGTTTGATCCGGGATTCTCCACGTCAGAGTTCAGACTGTAATGAAGATGTCAGACTACAGAGATAAACTTGAGGACTTTTACTTGCCCC
Associated Phenotype:
Not determined