ZMP
rae1
Ensembl ID:
ZFIN ID:
Description:
mRNA export factor [Source:UniProtKB/Swiss-Prot;Acc:Q7ZWF0]
Human Orthologue:
RAE1
Human Description:
RAE1 RNA export 1 homolog (S. pombe) [Source:HGNC Symbol;Acc:9828]
Mouse Orthologue:
Rae1
Mouse Description:
RAE1 RNA export 1 homolog (S. pombe) Gene [Source:MGI Symbol;Acc:MGI:1913929]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa2291 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa2291
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000020333 | Essential Splice Site | 126 | 368 | 6 | 13 |
| ENSDART00000136979 | Essential Splice Site | 126 | 126 | 5 | 5 |
The following transcripts of ENSDARG00000007196 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 6 (position 24012608)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 6 | 20268054 |
| GRCz11 | 6 | 22328276 |
KASP Assay ID:
554-2599.1 (used for ordering genotyping assays)
KASP Sequence:
AAAACCTGTACTTTTTGTGTGTAATTTAATAGGTTCTACNATTTTTTTTTC[A/T]GCATGAAGGTCCAATCAGGACAATTCACTGGATTAAAGCACCAAACTACA
Long Flanking Sequence:
TAAAAACCAGCACTGACTTATTTTGCTGGTTAAACAGATTAAACATTGCACTTGCATAGAACCCTTTAATGTACACTAAATAAAAGCCACAATATGATTTTTGCGCAAAATATAATTGTCTTTAAAATCTCTAATTTTCACTCCTACTTATTTGGTATGTTTATGGTTAGTGTGAGTTGTTTTGGTTTGTGATTTCTTAAACTGAAAAGAGGTGTTTACAGATGAATAACTGAATAACTACTAGGTACTGAAATTTTACACCCTCTTATCTGCTTTTGTGTTTTGCATGAAAAGGATGGTAGTAAAGTCTTTACAGCTTCTTGTGATAAAACTGCCAAGATGTGGGATCTGAACAGCAATCAGGCCATTCAGATAGCTCAAGTAAGGAGTTTGTGTTCATTTTATGTTTTTGTGCTTATGAATTGACCTAATTAAAGCTTTTTTTATAGCAAAACCTGTACTTTTTGTGTGTAATTTAATAGGTTCTACATTTTTTTTTC[A/T]GCATGAAGGTCCAATCAGGACAATTCACTGGATTAAAGCACCAAACTACAGCTGTATTATGACTGGCAGTTGGGACAAAACTTTAAAGGTGCTGGAACTCCTCCTCATTAGATTAAGACAGCAATCATGGTCATGAGATGACCTAATGACCTAACAGCAATTCTATTGTAGCCTTAGTCTAGAGTAGGTTAACAACTGTTTCTGTAATATCATAATTGTTTATTTTTCTTGACAGTTTTGGGATACACGTTCCCCAAACCCAATGATGTCCCTCCAGATGCCAGAGAGGTGTTATTGTGCCGATGTGGTAAATTAATTTATTATTATTTTTTTAATTGTTGAATTCATTTGCCTAGTTTGGATAATTACTTAGTTTAGTGTGTGTACTTGTTAAGAAAAGTACATCTCTTCCTTATTATCTGTACTGTGACATTGTCCTTAGGCAGTACATGATATCTAAAATATTTTTTTGTGAAATTTGATTTGTATTTTTGTTTTTG
Associated Phenotype:
This allele has been associated with this phenotype by genetic linkage analysis and may not be causal.
See FAQs for more info.
See FAQs for more info.
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
eye ZFA:0000107 |
decreased size PATO:0000587 |
abnormal PATO:0000460 |
| Larval:Day 5 ZFS:0000037 |
head ZFA:0001114 |
malformed PATO:0000646 |
abnormal PATO:0000460 |
| Larval:Day 5 ZFS:0000037 |
liver ZFA:0000123 |
hypoplastic PATO:0000645 |
abnormal PATO:0000460 |
| Larval:Day 5 ZFS:0000037 |
pancreas ZFA:0000140 |
absent PATO:0000462 |
abnormal PATO:0000460 |
| Larval:Day 5 ZFS:0000037 |
yolk ZFA:0000084 |
increased size PATO:0000586 |
abnormal PATO:0000460 |