Busch Lab

ZMP

si:dkey-230e6.2

Ensembl ID:
ENSDARG00000007045
ZFIN ID:
ZDB-GENE-090313-262
Human Orthologue:
CNOT4
Human Description:
CCR4-NOT transcription complex, subunit 4 [Source:HGNC Symbol;Acc:7880]
Mouse Orthologue:
Cnot4
Mouse Description:
CCR4-NOT transcription complex, subunit 4 Gene [Source:MGI Symbol;Acc:MGI:1859026]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa44291 Nonsense Mutation detected in F1 DNA Not yet available
sa13605 Essential Splice Site Available for shipment Available now
sa39482 Nonsense Mutation detected in F1 DNA Not yet available
sa44290 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa44291
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034714 Nonsense 131 772 3 12
ENSDART00000140182 None None 31 None 2
Genomic Location (Zv9):
Chromosome 25 (position 20506491)
Other Location(s):
Assembly Chromosome Position
GRCz10 25 19917392
GRCz11 25 20015046
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCTCTCTCTCTCTCTTAATCGTTTCTTAGGTTCTAAAGCGTCCAGAGTA[T/A]TTTGGCAAGTTTGGAAAAATTCATAAAGTGGTCATCAATAACAGCACGTC
Long Flanking Sequence:
AAATTCTGATATGCAGATTTGATGCTAAGAAATGTTTTGCTATTATAAATGTTAATTACTGATTACAAATCCTGTTGTGTTGCTTACTTTTAGTGCAAATTAAAACCAGAATTAAATTTATTTAAATTTTTTATTTTTTTTTAAAACAAATTTAATGTTAATGAATAACTTTTCATGTCACTGTTTTAACAATAATACATTTAATCACTGTGTATGTTTATTAAAGTTACTAAACACCTAAATCATATCTGTAAATAGTGTCACTTTCTGTGGTAGGTAAAAAAGAATAGCTCAAAAATAGTGTTTTCATCAGTGAGTCGTTTGCGATTTGCTGAAAAATAGGAAATTCCCTCCCTCAGAGTGATTTCACACTTTGATTGTGTGATAAGTGGCCGAACCTCACCGTTGTGTCTGTTTTGTCATTCATGCAATAATTCACCTCCATAATCTCTCTCTCTCTCTCTCTTAATCGTTTCTTAGGTTCTAAAGCGTCCAGAGTA[T/A]TTTGGCAAGTTTGGAAAAATTCATAAAGTGGTCATCAATAACAGCACGTCATATGCAGGTTCACAGGTAGGAAAAGCTCTCCTTTTTGCTAGCCTGATGCACACAACTCATTAAAGGAACCCTCCACTTTTTTGCTGATAGAGTTAAACATTTGAGTTTTACCACTGGCAGGAGTACTTTTAGCTTAGCATAAATCATTCATTCGAATTAGACCATTAGCATGCTAAAAAAACACTTGATAAATAAAAAAAAAAAAAAAAAGCTAAAGTCTTTTGTGTTAAAATGATGGGATTTTTTTGTTGTTGCTTTTTTCCTAGTCTGATATGGCTAGGAACTATACTCTCATTTTGACATAAAAAATCAAGTAACTTTTGGCTGCAAAATCTACCATGGCTGTAGCAGGTGAAGTAATGTTGTGATGTACTACTGAAAACTTAAGCTTTAAGTAGGAGATTTATCAAATTTGTGATTTTCACAACGGTCTAACCCGATTCAATGAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13605
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034714 Essential Splice Site 187 772 4 12
ENSDART00000140182 None None 31 None 2
Genomic Location (Zv9):
Chromosome 25 (position 20505227)
Other Location(s):
Assembly Chromosome Position
GRCz10 25 19916128
GRCz11 25 20013782
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAGYAATACAATGTGTAAACAATGTCATAGTGGACGGTAGAACGCTCAAG[G/A]TAAGTGCTAAGYCATCAGAATTTGATCTGTTTACAYARTATTTTCACGTC
Long Flanking Sequence:
GCTGTTTTATTCCAACATTCTTCAGTAAATCTTCATTTGTGTTTAAGAGAAAAAACAAATTTAAACGGGATTTGGAACAATCAAATGAGTTAAAAAAAACAAGAGTAAATGATGACAGAATAACATTTTGGGGGTTAAACTATTATCTTAAAGGCTGATTTATACTTCTGCATCAAGTGTATTTGTACGCTTCTCACGCATTTCCCTCACCGTGTTCAAGATAAGTAACTACACGTCAAAACAACATGTAGCGCAAGCTCTGTGATTGGTCGGCTTGGTATGCACTGTGGATCACGCTGATCACTCGATGCAAAAAAATAAACCAGCCTTTAGGCTACAGCAAAACAGTCGAGTTACGAAAACGTTTGTATTTTTTATTATTTTTTTTGTCTCCACAGGGTCCTAGTGCTAGTGCCTATGTAACTTACATTCGTTCAGAGGATGCCCTTAGAGCAATACAATGTGTAAACAATGTCATAGTGGACGGTAGAACGCTCAAG[G/A]TAAGTGCTAAGTCATCAGAATTTGATCTGTTTACACAGTATTTTCACGTCAGGGCTCCAGACAGCAAGTAAATGGATGTATTATGCAATTTTTGTTCATTTTGTTGGCGGTTTTAACTGGTGCTACTAGCAATGTGCCTTGTCTGTTGCATCTGTAAAACATTAAACATCTGAAGGAGAACAAAGCAGCAGTACTCGACTTGTTTGAACCAATTTTAAGCTAACTGCGAATGTTTAATTGCTGACTAATCTTGAGTTTACCACATGGTTCCAGTCACAAACCGCTAATGTCAGATTAAGATAATTTTTTTATATATATATATAAAAGGATTAAATTAGATTAAAAAAAGTTTGAAGTGAGATTAATGTCTATGACATTCTCCGCAGCACTGATGCAGAAAAACAAGAGAAGCCTTGTTTCAGACCACTATTGATCAACATTTACTATGGGTTGCTAGTAGCAGTGTAACTGTAAACATGATAATATGGTAGAAATGCAGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa39482
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034714 Nonsense 227 772 5 12
ENSDART00000140182 None None 31 None 2
Genomic Location (Zv9):
Chromosome 25 (position 20503894)
Other Location(s):
Assembly Chromosome Position
GRCz10 25 19914795
GRCz11 25 20012449
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCATGTATTTACATGAACTTGGCGATGAGGCAGCTAGTTTTACAAAAGAA[G/T]AAATGCAGGTGAGGGTGCATGTTTACACCTGATAACTTCAAAGCAGAAAT
Long Flanking Sequence:
TCAGAGTTAAGAGTTGTGTGTGTGGTTATAAAAGGTTTTAGTCAACAATAATAGCCCTGATTTATACTTGACATTTTATTTTTATTTTAAATAAAAAAATACATTTAGAAACCATATAGACGCTACTTAAATCATGGTCATGTAGTTCTTTTGGTTGTCATGATCCACAAACGTAGAGATTGTTAAAATCTGCCCAATCTGTGCGAATTTACATCTGCATCCCACAATTCAAGCTCTCGATTCTGTCAAATTATTAATATTACACGATACATCTGTAGACATTATTCTGGAGCTCTGTTTATTATGTTAGTGATCAATATTTATTTGATCATTCTGTCACCTTTTGATGTTGATAGTCATTGTGTCTCTTGCTTTGTTTGAAGGCTTCATTAGGTACAACAAAGTACTGCAGCTACTTTCTTAAAAGCATGCAGTGTCCTAAACCAGACTGCATGTATTTACATGAACTTGGCGATGAGGCAGCTAGTTTTACAAAAGAA[G/T]AAATGCAGGTGAGGGTGCATGTTTACACCTGATAACTTCAAAGCAGAAATTGAATTTGTATGTCTGATTTTGTTGTTTAACTACTATGTATTGTTTTTGTCAGGCTGGGAAACATCAAGAATATGAACAAAAGTTACTCCAAGACCTTTACAAAGCAAACCCCACCTTTTTACTAACCTCAACATGTGGGGAGAAGTCAAAGAGCAAATCCAATTCCACTCAGCGGTGTGTTTTTGTTTTTTGTTTTTTCTTAATCTCACATGCTCAATTAGACACCCTTATTTTTCAGTTATTGTATTGTCTTAATGTTTAGCCTGATTATATTTTCTATCTTTCAAATGATTTCATTTCCAGGCCCAATAGCACCAATAAAGAAGGATGGCCCTCATTACAGAATTATGGGAAAATGGTGAACGGTTTAACCACAGAGCATCGTAAGTCTCCTCCTCTATTAGACTGCCTAACAGACTCCGATCACATGACTCCAGACGAACCAGACC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa44290
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000034714 Nonsense 229 772 5 12
ENSDART00000140182 None None 31 None 2
Genomic Location (Zv9):
Chromosome 25 (position 20503888)
Other Location(s):
Assembly Chromosome Position
GRCz10 25 19914789
GRCz11 25 20012443
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATTTACATGAACTTGGCGATGAGGCAGCTAGTTTTACAAAAGAAGAAATG[C/T]AGGTGAGGGTGCATGTTTACACCTGATAACTTCAAAGCAGAAATTGAATT
Long Flanking Sequence:
TTAAGAGTTGTGTGTGTGGTTATAAAAGGTTTTAGTCAACAATAATAGCCCTGATTTATACTTGACATTTTATTTTTATTTTAAATAAAAAAATACATTTAGAAACCATATAGACGCTACTTAAATCATGGTCATGTAGTTCTTTTGGTTGTCATGATCCACAAACGTAGAGATTGTTAAAATCTGCCCAATCTGTGCGAATTTACATCTGCATCCCACAATTCAAGCTCTCGATTCTGTCAAATTATTAATATTACACGATACATCTGTAGACATTATTCTGGAGCTCTGTTTATTATGTTAGTGATCAATATTTATTTGATCATTCTGTCACCTTTTGATGTTGATAGTCATTGTGTCTCTTGCTTTGTTTGAAGGCTTCATTAGGTACAACAAAGTACTGCAGCTACTTTCTTAAAAGCATGCAGTGTCCTAAACCAGACTGCATGTATTTACATGAACTTGGCGATGAGGCAGCTAGTTTTACAAAAGAAGAAATG[C/T]AGGTGAGGGTGCATGTTTACACCTGATAACTTCAAAGCAGAAATTGAATTTGTATGTCTGATTTTGTTGTTTAACTACTATGTATTGTTTTTGTCAGGCTGGGAAACATCAAGAATATGAACAAAAGTTACTCCAAGACCTTTACAAAGCAAACCCCACCTTTTTACTAACCTCAACATGTGGGGAGAAGTCAAAGAGCAAATCCAATTCCACTCAGCGGTGTGTTTTTGTTTTTTGTTTTTTCTTAATCTCACATGCTCAATTAGACACCCTTATTTTTCAGTTATTGTATTGTCTTAATGTTTAGCCTGATTATATTTTCTATCTTTCAAATGATTTCATTTCCAGGCCCAATAGCACCAATAAAGAAGGATGGCCCTCATTACAGAATTATGGGAAAATGGTGAACGGTTTAACCACAGAGCATCGTAAGTCTCCTCCTCTATTAGACTGCCTAACAGACTCCGATCACATGACTCCAGACGAACCAGACCTTGAAC
Associated Phenotype:
Not determined