ZMP
lhx6
Ensembl ID:
ZFIN ID:
Description:
LIM/homeobox protein Lhx6 [Source:RefSeq peptide;Acc:NP_001004015]
Human Orthologue:
LHX6
Human Description:
LIM homeobox 6 [Source:HGNC Symbol;Acc:21735]
Mouse Orthologue:
Lhx6
Mouse Description:
LIM homeobox protein 6 Gene [Source:MGI Symbol;Acc:MGI:1306803]
Alleles
There is 1 allele of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa34853 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa34853
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000021100 | Essential Splice Site | 112 | 375 | 4 | 9 |
Genomic Location (Zv9):
Chromosome 10 (position 9466580)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 10 | 9542536 |
GRCz11 | 10 | 9376095 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTATTATTATTATTATTATTAATTTTCACATACGCTATAATGTTTGTTTC[A/T]GGTTAATAATCTGATCTGGCACGTGAGGTGTCTGGAATGTTCCGTCTGCA
Long Flanking Sequence:
AATTTAAGATGTTTGTAATTTTGATTAACATTATTAAAATATACCGTTTTATATTGTTTTCGCTTTTAATTTAATAATATAATGCAAGCATTTACTTAATTTAACCACACAATTTTAAAGAATTATTACAAATATTTAAAAGATTCTAATTTTTAATTACAACTTAATTCTAAACAAATATTTTCATTAGAAGCCTGTCACATATATATATATATATATATTTTGCCAGTGATTTTAAGATTAAATAAATCGAGTTATTTTTAGAATGGTTAATTACATTGTTGTATAAAGCAAATGCTACGAATTGGTAAAAAATGCAATTAGACTTGCACTGTGCATTTTTTAGTGTCCTATTTTAATTTCAATATTATTATTATTACCAGTACTCTATTCTTCTTCTTCTTCTTCGTCTTCTTCTTCTTCTTCTTATTATTATTATTATTGTTGTTATTATTATTATTATTATTATTAATTTTCACATACGCTATAATGTTTGTTTC[A/T]GGTTAATAATCTGATCTGGCACGTGAGGTGTCTGGAATGTTCCGTCTGCAGGACTTCACTACGCCAGCACAGCAGCTGCTATATTAAAAACAAGGAAATCTTCTGTAAAATGGATTATTTCAGGTAGGGTAAGTTTTTCACTTTCTGTCCTTAAAAATATCTGGCGTGCACATACACGAAATAGTTTACTACTGAAGTATATAATTGAAAATACGTTGCGCGAGTGTTGCGTCTTAAGCTTTAGCGCTTAAAAATGTGATTTCGTCAAAAAGTATCAATCTAATTCTTACCTAAACAAATATATATTATTTCAGAAAACGCTGTTTATAATTTAGTGATTTAATTTAACTTTCTAGTGAGTTAAATTAACGCTTTTAACTATTTAAAGCATCCGCAAAACCTGATAAAGCCTAATAATTAAAGACAATCGATTTATTAAGTGTTTCGGGTTTATAACTAAATGATTTATTCATTAGAAATAAAGTCTGAGATTCCATAAT
Associated Phenotype:
Not determined