ZMP
pvrl3l
Ensembl ID:
ZFIN ID:
Description:
Poliovirus receptor-related protein 3-like [Source:UniProtKB/Swiss-Prot;Acc:Q58EG3]
Human Orthologue:
PVRL3
Human Description:
poliovirus receptor-related 3 [Source:HGNC Symbol;Acc:17664]
Mouse Orthologue:
Pvrl3
Mouse Description:
poliovirus receptor-related 3 Gene [Source:MGI Symbol;Acc:MGI:1930171]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa20 | Essential Splice Site | Available for shipment | Available now |
| sa21 | Nonsense | Confirmed mutation in F2 line | Not yet available |
| sa25156 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa20
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000031205 | Essential Splice Site | 148 | 574 | 2 | 6 |
| ENSDART00000141487 | None | None | 200 | None | 4 |
| ENSDART00000147593 | Essential Splice Site | 148 | 574 | 3 | 7 |
Genomic Location (Zv9):
Chromosome 21 (position 20359564)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 21 | 21435734 |
| GRCz11 | 21 | 21472370 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CACCTTTCCGCTGGGTAACACACAGGCCTCCACCACTGTCAGCGTACTAG[G/A]TAACAAGAGACTGTGTGTGTGTGTGTGGATGCTGGATTGATAAAGGCCAT
Long Flanking Sequence:
GCTCTGCTAACAGACCTTGGCGTCTGATTGATCGGTGCTCCAACAGGATAAAAACCGATTTGTCAGTAGAGATGTTGTTCAAGTGCTTTGTTTTCCGCTGCTGCTCAAATGTTGACGCGACTAACCTTTTCTCCCTTTCTGTGCCCTAGGGTTGGTATATGGCAGTCAGGTGATCGTCCCCCCTAAAGTGAATGCTGTTTTGGGTAAGAATGTCACCCTCAGCTGCAGGGTACAAGTGGACACAAACCTCAGCCTGACACAGAGCTCCTGGGAGAGGAAGCTGCCCAATGGATGGGTGACCCTGGCCGTGTACAACCCCATGTTTGGTATCTCCATCCCTCCCGATTATGAGCGACGCCTGTCCTTCCGCTCGCCCTCTGCACTCGACGCCACCATCATGCTGGAAGATGTGGGTTTTGCTGACATCGGCGTGTACACCTGCAAGGTTGCCACCTTTCCGCTGGGTAACACACAGGCCTCCACCACTGTCAGCGTACTAG[G/A]TAACAAGAGACTGTGTGTGTGTGTGTGGATGCTGGATTGATAAAGGCCATGAAAAAATTCAAGTGAAGTCATGTGAAATACCTGATACTGTTAATGAACATCCCAACTCCAGTCACACTATTGTAAGCACCATTCAGTTTATCAGGTCATAAATCAGTGCTTTTCCTGGGCCAAGCAAAGTCTCCAGTAGTGGCTGAGACTAACTTGTACTTGCACACAGTAAAGTATCCTAGTGTGCTACCATAACTAAATTAAATGCGTGATTTTTTTTCTTATATTTATAATTAAAGCATCTTTATAAAAAAGTATATAATATATTAAGTATAAAAAAGAAATATGTGACGAATGGAGTTTGTTTTTGAATCGTGTTTTGAACTAACAAATTTAATTTTAGTTTTTTTTATGATGTTTTGAATTTACGAATTGTGTTTTGTAAATGTAAAGGGTGCTGTGGATGTATGAATTATATTTTGTAAATGTGCTATTTTTGAGATTAATCG
Associated Phenotype:
Normal
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa21
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000031205 | Nonsense | 192 | 574 | 3 | 6 |
| ENSDART00000141487 | Nonsense | 44 | 200 | 1 | 4 |
| ENSDART00000147593 | Nonsense | 192 | 574 | 4 | 7 |
Genomic Location (Zv9):
Chromosome 21 (position 20352175)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 21 | 21428345 |
| GRCz11 | 21 | 21464981 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTGAGAGGGCTCGACCCCCTGCTGACGTGTCCTGGGAGACCAATCTGTA[T/A]GGGATGTCTGAGGCCCACATGCAGGAGGACGCCAACGGCACCACTACAAC
Long Flanking Sequence:
GCCATAACAAAATATACATTTTCATAGTTTTGTAGAATAAAATGTTTTGAATGATTAGGTGTATTATGTATGGCATATCACGTATGCCTCTGTAAAAACTTTAAGAATGAAGGTTTATTAAACTGAGGTGTGGTTTAAGTGCTGCTGAAGTGGAGATTTGTGTCTCAATACAGTAAAATATCTCATTTTGCCCTTTGAAAATATGCAGTATTATTAAAATTTGCTGACACACATTTATTAAAGGGAATCAAAAGAAAGTATATTTTTGAATGTTTTTTGACTGAAGGAAATGCCATTAAAAGTCCAAAAGTGCATGAGAAAACAGTGTTCTCACATTAACACAGACTCTGTCTCCGCCTGTCCGTTTCAGTGGAGCCAAAGGTGTATGTCTCTGCTGGATCTTCTGCACTGATTGACGGTGGCAATGAGACCACAGTGGCCACCTGCATTGCTGAGAGGGCTCGACCCCCTGCTGACGTGTCCTGGGAGACCAATCTGTA[T/A]GGGATGTCTGAGGCCCACATGCAGGAGGACGCCAACGGCACCACTACAACACAGGTGCACTACATCTGGCAGCCGTCCCGTCACGCACAGGGACACACTCTAACATGTGTGGTGAAACACCCTGCTCTGCAGAGTGACTTCAGGATCCCCTACATCATCAATGTACAGTGTGAGTATCAGTTTAAGTGTTCACCTGTATTTTTTTTTTACTGTAAATTTGGCATCTACTAATGGTCTAATTAAATATGATAATTTATTTACATTATTACAGCGATTTATGCAAGACACTCACAAAAATTTAGTGTAACAAAGTGGACCCTCATTATTTATGGTAGTTACGTTCTAAGAAAAACCCACAATAGGCAAAATCCGCAAAGTAGTCAGCTTTTCTTTTTTTTTTCTTTTTTTTTTTTTTTTACAATTAATATGTTTGATGTTTTAAGGCTGTAAAAACCCTCACTACTCTCTCTATACACTTTTCAGACAGGCATTAACATTTT
Associated Phenotype:
Normal
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa25156
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000031205 | Nonsense | 422 | 574 | 6 | 6 |
| ENSDART00000141487 | None | None | 200 | None | 4 |
| ENSDART00000147593 | Nonsense | 422 | 574 | 7 | 7 |
Genomic Location (Zv9):
Chromosome 21 (position 20338501)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 21 | 21414671 |
| GRCz11 | 21 | 21451307 |
KASP Assay ID:
554-7290.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTGGGGTTTATTACCAGCGTCAACGTCGGACTTTCCGCGGAGACTACTA[T/A]ACAAAGCAGTATCATGGCCCATCAGACATGCAGAAGGCTCCTCAGCCCCA
Long Flanking Sequence:
GAAGCTTTTGGAAGATGCTTTCAATAAAAGATCTCCTTCAAAACCTGGTACTGTCTCGTCCACAGCAACAGAAGATAGTCCTGTTATTCATGCTTGATGTCATGCTAGAAGATGTTACAATCTTGGCAGATTCATATGACTGTTAATGAAAATACTGATGTAGTTGGCATTGACATTATCTACTTTTCTTTGTCTGTCCATCCCTTCCTCCTGAATCCCCCTCCCTTGCCTCCTTCCTTCCCTCCATTAGATCCTCCCTCAACCACCACCATGCCCCCCACCACCCCAGTGCGCCTCCTAACTGCTGACATCTCTGCCACCGCACCTGGCAATAAGCAGCGAGCCCTCATCACCTCTCCAACCCTGGCGCCTCTGCACGAGGGGAGCCTAGGCACAATTGTGGGCGGGGCAGTGGGTGGAGCCCTCTTCCTGCTGTTGCTGCTCATTCTGGCTGGGGTTTATTACCAGCGTCAACGTCGGACTTTCCGCGGAGACTACTA[T/A]ACAAAGCAGTATCATGGCCCATCAGACATGCAGAAGGCTCCTCAGCCCCATGAGCTGCAGCAAGTCTACAGCAAGGGAAGTCCTGACACCAAGCTCAAATCCAACCAGGATAACGGCACCATCTACCCAGATAAGGATAGGGAAGAATGGGGGGATTTCGACCGAGAGCGATCACCCAACGGTCGCAGCAGAGCTCTGAGAGAAGCAGGTCAACTCAATCACCATAACCATCAGAACCATGAGCATGGCTTCCACAGCAATCATCACACTGGTCATCCGCAGAGCTACAGTCCAGCCCATCACATCCAGAGGAGCTCGCTGCAGCCGCAGCCCCGCAGGTATCCTGCTCCTCAAGTCATGAGCAATGGCTCCCCCTACCTGCCGGAGGACTGCTACGACAATGAGTATGTCTCACACACAGATGGCTCAATGATCTCCCGGAGGGAGTGGTATGTCTGAGAAGAACAAGCAGAAAGAGACTGCATAGATACTTAAGAAAT
Associated Phenotype:
Not determined