ZMP
rgp1
Ensembl ID:
ZFIN ID:
Description:
retrograde Golgi transport protein RGP1 homolog [Source:RefSeq peptide;Acc:NP_001002608]
Human Orthologue:
RGP1
Human Description:
RGP1 retrograde golgi transport homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:21965]
Mouse Orthologue:
Rgp1
Mouse Description:
RGP1 retrograde golgi transport homolog (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:1915956]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa9882 | Nonsense | Available for shipment | Available now |
| sa38608 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa20929 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa9882
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000048921 | Nonsense | 271 | 386 | 8 | 9 |
| ENSDART00000147342 | None | None | 38 | None | 2 |
Genomic Location (Zv9):
Chromosome 7 (position 25802203)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 7 | 24363955 |
| GRCz11 | 7 | 24635112 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATTYAGTAAGTCTGCAAAGTGAAGAGGAGGTGCAGGAGCAGTATCAGAGA[C/T]GACCCGGCCAGGCAGTCAGTGTCACTGGTCATGGCCGACATCTAGAGTCC
Long Flanking Sequence:
CGTAATCTAGAGGCTTTTGCCTTTCATATAAGCCACTTCTGATACTAAATGATCTACTAGAAGTCAGGTTATTATTTGTTGTTCCTAAGACTTAGATACGTGACAAGACTTCTGTCAGGTAGTGTACAGATTATTTAACAGCTGGGTAATTCTTTCAGATCTTTAAAATATGATAAAATAGTTATGTATAAAACTTACTCTTAGTATTTAATATATTATATTGTGTTGAACAGAAGAAAGAAACTCATAAAGTTTGATAACCATGTGAGGGAGTATTAATGATGCTGCATTTCTGGGTGGACTATCCCTTAAAACTTTATCTAGTACTGCAGCTTTAAAGTTTTGTTAAAATTTTGCCACAGTTCATCTGAATTTTTGCACAGTACTGTAAATACTTCATGAAGTGGCCCAGAAACGTTCATGTGCATTTATGTCTTGTGTCTGCTCAGTATTCAGTAAGTCTGCAAAGTGAAGAGGAGGTGCAGGAGCAGTATCAGAGA[C/T]GACCCGGCCAGGCAGTCAGTGTCACTGGTCATGGCCGACATCTAGAGTCCTGCTTGCACACAGCATCCAGCCATTTCTCTCTTCCTGTGCCTCTTAACGTCACACCAGGGTTCACCACAGATATAGGTAACAAAAACTTCATCATCTACAAATGTACAGAATATGTGTTAATTACAGTTTTTTAGGTGGTACTGTTTTTGTTAATTGAAAATAAATACTATTAATATGTGACTCTGGAGCACAAAGCCAGTCACATGAGTATACAATACTAGTCAAAAGTTTGGGGTCAGTAGGATTTTTTAATGTTTTAAAATAAGCTAATCTTGCTCACCAAGCTTGCATTTATTTAATCAAAAATACAGTACAAATAGTACAATTGTGAAATGTTATTGCACTATAAAATAACTGTTAATCATTGAATTTAATAATTAATTCCAGTGATTTTAAAGATGAATTGTCAGCTTCATTACTCCAGTCTTCAGAGTCACATGATCCTACAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa38608
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000048921 | Essential Splice Site | 312 | 386 | 8 | 9 |
| ENSDART00000147342 | None | None | 38 | None | 2 |
Genomic Location (Zv9):
Chromosome 7 (position 25802076)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 7 | 24363828 |
| GRCz11 | 7 | 24634985 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCTCTTCCTGTGCCTCTTAACGTCACACCAGGGTTCACCACAGATATAG[G/A]TAACAAAAACTTCATCATCTACAAATGTACAGAATATGTGTTAATTACAG
Long Flanking Sequence:
AGATTATTTAACAGCTGGGTAATTCTTTCAGATCTTTAAAATATGATAAAATAGTTATGTATAAAACTTACTCTTAGTATTTAATATATTATATTGTGTTGAACAGAAGAAAGAAACTCATAAAGTTTGATAACCATGTGAGGGAGTATTAATGATGCTGCATTTCTGGGTGGACTATCCCTTAAAACTTTATCTAGTACTGCAGCTTTAAAGTTTTGTTAAAATTTTGCCACAGTTCATCTGAATTTTTGCACAGTACTGTAAATACTTCATGAAGTGGCCCAGAAACGTTCATGTGCATTTATGTCTTGTGTCTGCTCAGTATTCAGTAAGTCTGCAAAGTGAAGAGGAGGTGCAGGAGCAGTATCAGAGACGACCCGGCCAGGCAGTCAGTGTCACTGGTCATGGCCGACATCTAGAGTCCTGCTTGCACACAGCATCCAGCCATTTCTCTCTTCCTGTGCCTCTTAACGTCACACCAGGGTTCACCACAGATATAG[G/A]TAACAAAAACTTCATCATCTACAAATGTACAGAATATGTGTTAATTACAGTTTTTTAGGTGGTACTGTTTTTGTTAATTGAAAATAAATACTATTAATATGTGACTCTGGAGCACAAAGCCAGTCACATGAGTATACAATACTAGTCAAAAGTTTGGGGTCAGTAGGATTTTTTAATGTTTTAAAATAAGCTAATCTTGCTCACCAAGCTTGCATTTATTTAATCAAAAATACAGTACAAATAGTACAATTGTGAAATGTTATTGCACTATAAAATAACTGTTAATCATTGAATTTAATAATTAATTCCAGTGATTTTAAAGATGAATTGTCAGCTTCATTACTCCAGTCTTCAGAGTCACATGATCCTACAGAAATCCTTCTAATAACAATAATGATAATTATTATTGTTGTTATTATTATTATTTTATTTTATTATTATTGCTATTTTTAGGTAACACTTTAGAGCAGTGGTCACCAAACTTGTTCCTGGAGGGCCGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa20929
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000048921 | Nonsense | 374 | 386 | 9 | 9 |
| ENSDART00000147342 | None | None | 38 | None | 2 |
Genomic Location (Zv9):
Chromosome 7 (position 25798991)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 7 | 24360743 |
| GRCz11 | 7 | 24631900 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGGACCTGCCAATCAAAGTGCTTCCCACCAATCCCACGCTCGCTTCATA[T/A]GTTTCACAGTTCACAGGGACAAACAGCATCAATATTTGAGTTGTGCTAGG
Long Flanking Sequence:
AGCTAAAAACCTGTAACTATTGACTTCCATAGTAGGAAAAACAAATACCATGAAAGTCAATGGTGACCAGTTTCTAACATTTTTCAAAATATCTACTTTAGTGTTCAACAGAACAAAGAAAGTCATAAAGGTTAATGAAAGGGTCAGTTAATGATGCCAAATACAAGTATCCCGTTAATGATTCTGGTTTGCGTAACCCTGGAGCTTTAAATGTTAGATTAAAGATATGTGAACCAGGGATGTGACTTAATATTAAAACTGCAGTTGAATAAATAAAGCAAGCATTCTCATTCAGAGTTTTTCACTTCTTCCCCAGTGACGTTAAGATGGCGTCTGCATTTTGAGTTTGTCACGGCGAGGGAGCCTGTGGAGGCACCAGTGGTCCTGCAGAATCAGTCAGAGGTCACAGTGTGGACCGGGGCCGAGCACGTGGATGTGGACACCTTCAGCTGGGACCTGCCAATCAAAGTGCTTCCCACCAATCCCACGCTCGCTTCATA[T/A]GTTTCACAGTTCACAGGGACAAACAGCATCAATATTTGAGTTGTGCTAGGGTTTGAGGCGGGAGATCCTAAAACTAACAAGCGTTGTGGTGTCATTCGAGCAGTCCATTCCAATTTCAGTGTCGTTTGACTGGTTTTACCTTGTGCCGTGCAGTGAAATCATTCTTTATTTAAGCTACTTTAACATTTCAGACTTGACCAAGAGTCTGCTTTACCTCTTGTAATGTTAACAAATGTTCTGTATTTATTGTCAATATTGCAATGTATGCTCCAAAAGACGGTTTCTATTATATTTCAGTTCCTCTATTGCAAGCTATTTTGTACATTTCTCTACATGCAAAAGAAAACTGAATAAAGTCTGTAAAGAGTTATTATTGCAGCTGAAGATTTAATGAAACCCTTGTCACTTTAAAAAAAAATTATTTAAAAAAAAGCAATGAAAATAAAGATTTTTTTTTTTACATATTTTTTATTAGGAGTAAACATTCAAAATATTAGATG
Associated Phenotype:
Not determined