ZMP

pdgfrl

Ensembl ID:

ENSDARG00000006456

ZFIN ID:

ZDB-GENE-040426-901

Description:

platelet-derived growth factor receptor-like [Source:RefSeq peptide;Acc:NP_956608]

Human Orthologue:

PDGFRL

Human Description:

platelet-derived growth factor receptor-like [Source:HGNC Symbol;Acc:8805]

Mouse Orthologue:

Pdgfrl

Mouse Description:

platelet-derived growth factor receptor-like Gene [Source:MGI Symbol;Acc:MGI:1916047]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa35708	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa6346	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa35708

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000007022	Essential Splice Site	263	371	4	6
ENSDART00000007022	Essential Splice Site	263	371	4	6

Genomic Location (Zv9):

Chromosome 14 (position 31230398)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	14	30020455
GRCz11	14	30360769

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AAAACCACCCCGCAAATATCAACTAAATACCAACTGCTGTATGTGGAGGG[T/C]AAGAGGAGAACATACATTTACTGTCAGGATACACATTTTTGGCATTTTGT

Long Flanking Sequence:

GTCGCCCTCTGCTGCTGACACTGGAGAATACAGCTGCTGGGTTCTGCTCTGTGACGGACAGGAATGTGAGAAAGATGTAGACACCATCTCTGCCACCTACATATACTTCACAGGTACATTATTCTCTTACAAATAACACAAATACATCTTTATGATCAATAAACTCCAAAGACATAGTTATGCTTCTCTTTGTATCCAGACAAAGATGAGCTGTTTGTTCCCTCTGCCATTCATTTTGAGATCATTTACCTGCGCCCTGACAAACCTGCCACCATCCCCTGCCGGGTGACCAACCCCAAAATCAAAGTCTCGCTACACAGAGAAGTTCCTGCAGAGGAAATTGCTGTGGATGGGACTCAGATCTCCTACAATCCCACTAAAGGCTTCATCATCCAAAACCCCAGTCCAGAACATAAGGGAGCGTATTACTGCAAGGCCAACAGCACTAGCAAAACCACCCCGCAAATATCAACTAAATACCAACTGCTGTATGTGGAGGG[T/C]AAGAGGAGAACATACATTTACTGTCAGGATACACATTTTTGGCATTTTGTGATGCATTTCCTCCTTTGCAGTACCTAGTGGTCCCCCTTTTGCAACGATTGAGGCTTCTTCAAATTCAGTGAGTGGTGGAGATGTATTTAATGTTACCTGCACAGTGCTGGGTGAACCAGAGATGAATGTCAGCTTCAGCTGGAGGTATCCCGGCCAGGTAAGTATTGCATTTTTACACATTAAGGGCTTTTGCACTAGGACCTATTATAGCAAAGGTGTCAAATTCAGTTCATGGAGGGCCACAGCTCTGCACAGTTAGGTTTAACCCTAATTAAACACACCTGAACTAATTGAGCCCTTCAGACTTGTTTAAAATCTTACGGTAAAGCTGCAGTTACACTAGAGTTTGTGTATGCGAAATTCGTACGGCGCTGCGAAAAGGGGAACTTGTCATAACATATATTGATCAATCAGCTTGGTTGTCAAGGCAGAATTTCAAGTGCAACCAA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa6346

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000007022	Nonsense	303	371	5	6

Genomic Location (Zv9):

Chromosome 14 (position 31230206)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	14	30020263
GRCz11	14	30360577

KASP Assay ID:

554-5086.1 (used for ordering genotyping assays)

KASP Sequence:

TGTTACCTGCACAGTGCTGGGTGAACCAGAGATGAATGTCAGCTTCAGCT[G/A]GAGGTATCCCGGCCAGGTAAGTWTTGCATTTWTACACATTAAGGGCTTTT

Long Flanking Sequence:

TATCCAGACAAAGATGAGCTGTTTGTTCCCTCTGCCATTCATTTTGAGATCATTTACCTGCGCCCTGACAAACCTGCCACCATCCCCTGCCGGGTGACCAACCCCAAAATCAAAGTCTCGCTACACAGAGAAGTTCCTGCAGAGGAAATTGCTGTGGATGGGACTCAGATCTCCTACAATCCCACTAAAGGCTTCATCATCCAAAACCCCAGTCCAGAACATAAGGGAGCGTATTACTGCAAGGCCAACAGCACTAGCAAAACCACCCCGCAAATATCAACTAAATACCAACTGCTGTATGTGGAGGGTAAGAGGAGAACATACATTTACTGTCAGGATACACATTTTTGGCATTTTGTGATGCATTTCCTCCTTTGCAGTACCTAGTGGTCCCCCTTTTGCAACGATTGAGGCTTCTTCAAATTCAGTGAGTGGTGGAGATGTATTTAATGTTACCTGCACAGTGCTGGGTGAACCAGAGATGAATGTCAGCTTCAGCT[G/A]GAGGTATCCCGGCCAGGTAAGTATTGCATTTTTACACATTAAGGGCTTTTGCACTAGGACCTATTATAGCAAAGGTGTCAAATTCAGTTCATGGAGGGCCACAGCTCTGCACAGTTAGGTTTAACCCTAATTAAACACACCTGAACTAATTGAGCCCTTCAGACTTGTTTAAAATCTTACGGTAAAGCTGCAGTTACACTAGAGTTTGTGTATGCGAAATTCGTACGGCGCTGCGAAAAGGGGAACTTGTCATAACATATATTGATCAATCAGCTTGGTTGTCAAGGCAGAATTTCAAGTGCAACCAATCCTTTTAAACAGACATGTTGAATCGGGTAAAGAAATTAAAATGTTAAGTTCATAGAACTTTAAATATTAAGTAAAAGACTTTTGCTGCCTAATGAGTAAGTTACACACATCTGTTTAAGTTTTGATGCCATTAAAACTTGGTATTTAAGCATTGTCAGGTTATATTAAATTAAAATCTTTAGTAATGATAA

Associated Phenotype:

Not determined